FFCP PHASE1:Hg19::chr10:13141974..13141997,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83643 | |EntrezGene=83643 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23813 | |HGNC=23813 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-261bp_to_uc001ilr.2,uc009xjc.1,uc009xjd.1_5end | |association_with_transcript=-261bp_to_uc001ilr.2,uc009xjc.1,uc009xjd.1_5end | ||
|cluster_id=chr10:13141974..13141997,- | |||
|coexpression_cluster_id=C279 | |coexpression_cluster_id=C279 | ||
|description=CAGE_peak_3_at_CCDC3_5end | |description=CAGE_peak_3_at_CCDC3_5end | ||
|id=chr10:13141974..13141997,- | |id=chr10:13141974..13141997,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.09e-19;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.74e-29!57;UBERON:0005068!1.74e-29!57;UBERON:0006241!1.74e-29!57;UBERON:0007135!1.74e-29!57;UBERON:0001017!4.47e-27!82;UBERON:0002616!9.35e-27!59;UBERON:0005743!1.59e-25!86;UBERON:0000955!4.40e-25!69;UBERON:0006238!4.40e-25!69;UBERON:0000073!3.52e-24!94;UBERON:0001016!3.52e-24!94;UBERON:0002780!4.93e-23!41;UBERON:0001890!4.93e-23!41;UBERON:0006240!4.93e-23!41;UBERON:0003080!4.40e-22!42;UBERON:0003075!2.13e-21!86;UBERON:0007284!2.13e-21!86;UBERON:0002346!8.03e-21!90;UBERON:0002020!8.91e-20!34;UBERON:0003528!8.91e-20!34;UBERON:0001893!1.86e-19!34;UBERON:0002791!4.72e-19!33;UBERON:0001869!6.93e-18!32;UBERON:0003056!1.05e-15!61;UBERON:0007023!2.18e-13!115;UBERON:0000956!2.93e-13!25;UBERON:0000203!2.93e-13!25;UBERON:0000033!4.79e-12!123;UBERON:0000153!7.28e-12!129;UBERON:0007811!7.28e-12!129;UBERON:0004121!1.03e-11!169;UBERON:0000924!1.21e-11!173;UBERON:0006601!1.21e-11!173;UBERON:0002619!1.99e-11!22;UBERON:0001950!6.07e-10!20;UBERON:0003076!1.64e-08!15;UBERON:0003057!1.64e-08!15;UBERON:0002420!2.18e-08!9;UBERON:0007245!2.18e-08!9;UBERON:0010009!2.18e-08!9;UBERON:0010011!2.18e-08!9;UBERON:0000454!2.18e-08!9;UBERON:0002308!3.18e-08!9;UBERON:0000125!3.18e-08!9;UBERON:0004733!4.67e-08!12;UBERON:0002028!4.67e-08!12;UBERON:0007277!4.67e-08!12;UBERON:0004732!4.14e-07!13;UBERON:0009663!9.27e-07!7 | |ontology_enrichment_uberon=UBERON:0001049!1.74e-29!57;UBERON:0005068!1.74e-29!57;UBERON:0006241!1.74e-29!57;UBERON:0007135!1.74e-29!57;UBERON:0001017!4.47e-27!82;UBERON:0002616!9.35e-27!59;UBERON:0005743!1.59e-25!86;UBERON:0000955!4.40e-25!69;UBERON:0006238!4.40e-25!69;UBERON:0000073!3.52e-24!94;UBERON:0001016!3.52e-24!94;UBERON:0002780!4.93e-23!41;UBERON:0001890!4.93e-23!41;UBERON:0006240!4.93e-23!41;UBERON:0003080!4.40e-22!42;UBERON:0003075!2.13e-21!86;UBERON:0007284!2.13e-21!86;UBERON:0002346!8.03e-21!90;UBERON:0002020!8.91e-20!34;UBERON:0003528!8.91e-20!34;UBERON:0001893!1.86e-19!34;UBERON:0002791!4.72e-19!33;UBERON:0001869!6.93e-18!32;UBERON:0003056!1.05e-15!61;UBERON:0007023!2.18e-13!115;UBERON:0000956!2.93e-13!25;UBERON:0000203!2.93e-13!25;UBERON:0000033!4.79e-12!123;UBERON:0000153!7.28e-12!129;UBERON:0007811!7.28e-12!129;UBERON:0004121!1.03e-11!169;UBERON:0000924!1.21e-11!173;UBERON:0006601!1.21e-11!173;UBERON:0002619!1.99e-11!22;UBERON:0001950!6.07e-10!20;UBERON:0003076!1.64e-08!15;UBERON:0003057!1.64e-08!15;UBERON:0002420!2.18e-08!9;UBERON:0007245!2.18e-08!9;UBERON:0010009!2.18e-08!9;UBERON:0010011!2.18e-08!9;UBERON:0000454!2.18e-08!9;UBERON:0002308!3.18e-08!9;UBERON:0000125!3.18e-08!9;UBERON:0004733!4.67e-08!12;UBERON:0002028!4.67e-08!12;UBERON:0007277!4.67e-08!12;UBERON:0004732!4.14e-07!13;UBERON:0009663!9.27e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0000073;5.70e-30;53!UBERON:0002616;5.70e-30;53!UBERON:0002780;3.66e-24;41!UBERON:0001890;3.66e-24;41!UBERON:0002791;1.91e-20;32!UBERON:0002619;5.38e-20;22!UBERON:0000956;1.63e-17;25!UBERON:0000203;1.63e-17;25!UBERON:0003528;1.65e-17;34!UBERON:0002020;1.65e-17;34!UBERON:0004733;2.05e-17;12!UBERON:0002028;2.05e-17;12!UBERON:0001869;2.11e-17;32!UBERON:0001950;2.18e-17;20!UBERON:0000955;3.23e-17;68!UBERON:0001893;4.61e-17;34!UBERON:0004732;4.92e-16;13!UBERON:0001017;1.52e-14;75!UBERON:0001016;7.42e-14;83!UBERON:0002680;5.87e-11;9!UBERON:0001895;5.87e-11;9!UBERON:0002420;1.48e-10;9!UBERON:0007245;1.48e-10;9!UBERON:0010009;1.48e-10;9!UBERON:0010011;1.48e-10;9!UBERON:0000454;1.48e-10;9!UBERON:0002037;9.18e-10;6!UBERON:0002298;2.63e-09;6!UBERON:0001896;1.01e-08;3!UBERON:0005290;1.01e-08;3!UBERON:0001871;3.29e-08;6!UBERON:0001894;3.29e-08;7!UBERON:0009663;4.83e-08;7!UBERON:0006834;3.72e-07;1!UBERON:0002038;3.72e-07;1!UBERON:0003112;3.72e-07;1!UBERON:0000996;3.72e-07;1!UBERON:0011158;3.72e-07;1!UBERON:0009661;3.72e-07;1!UBERON:0002950;3.72e-07;1!UBERON:0003128;3.72e-07;1!UBERON:0001891;3.72e-07;1!UBERON:0001703;3.72e-07;1!UBERON:0002241;3.72e-07;1!UBERON:0002784;6.11e-07;4!UBERON:0003296;9.63e-07;4!UBERON:0010133;9.63e-07;4 | |||
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| ||
|short_description=p3@CCDC3 | |short_description=p3@CCDC3 | ||
}} | }} |
Latest revision as of 02:47, 17 September 2015
Short description: | p3@CCDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CCDC3_5end |
Coexpression cluster: | C279_parietal_cerebellum_occipital_temporal_middle_duodenum_medial |
Association with transcript: | -261bp_to_uc001ilr.2, uc009xjc.1, uc009xjd.1_5end |
EntrezGene: | CCDC3 |
HGNC: | 23813 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data