FFCP PHASE1:Hg19::chr10:95517685..95517743,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9211 | |EntrezGene=9211 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6572 | |HGNC=6572 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc001kje.2,uc009xui.2_5end | |association_with_transcript=2bp_to_uc001kje.2,uc009xui.2_5end | ||
|cluster_id=chr10:95517685..95517743,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_1_at_LGI1_5end | |description=CAGE_peak_1_at_LGI1_5end | ||
|id=chr10:95517685..95517743,+ | |id=chr10:95517685..95517743,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.17e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.30e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.05e-18;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002780;4.93e-40;41!UBERON:0001890;4.93e-40;41!UBERON:0001893;1.17e-38;34!UBERON:0003528;1.55e-38;34!UBERON:0002020;1.55e-38;34!UBERON:0001869;1.74e-38;32!UBERON:0002791;2.29e-38;32!UBERON:0002619;6.23e-37;22!UBERON:0000073;1.14e-36;53!UBERON:0002616;1.14e-36;53!UBERON:0001950;1.45e-33;20!UBERON:0000956;1.03e-31;25!UBERON:0000203;1.03e-31;25!UBERON:0001017;7.26e-29;75!UBERON:0000955;4.50e-26;68!UBERON:0001016;3.19e-24;83!UBERON:0002420;1.08e-15;9!UBERON:0007245;1.08e-15;9!UBERON:0010009;1.08e-15;9!UBERON:0010011;1.08e-15;9!UBERON:0000454;1.08e-15;9!UBERON:0000125;3.05e-15;9!UBERON:0002308;3.05e-15;9!UBERON:0007023;2.17e-14;114!UBERON:0011216;4.12e-13;132!UBERON:0009663;1.76e-12;7!UBERON:0004732;4.58e-12;13!UBERON:0001871;4.78e-12;6!UBERON:0000200;2.60e-11;6!UBERON:0001894;2.85e-11;7!UBERON:0004733;6.69e-11;12!UBERON:0002028;6.69e-11;12!UBERON:0000922;8.13e-11;49!UBERON:0002298;1.06e-10;6!UBERON:0000349;7.87e-10;5!UBERON:0002021;3.91e-09;5!UBERON:0001872;4.93e-09;5!UBERON:0000369;2.10e-08;4!UBERON:0002435;2.10e-08;4!UBERON:0000204;2.10e-08;4!UBERON:0010314;3.29e-07;132!UBERON:0002784;5.50e-07;4!UBERON:0002680;8.10e-07;9!UBERON:0001895;8.10e-07;9!UBERON:0003296;8.73e-07;4!UBERON:0010133;8.73e-07;4!UBERON:0005383;9.27e-07;3!UBERON:0005382;9.27e-07;3 | |||
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| ||
|short_description=p1@LGI1 | |short_description=p1@LGI1 | ||
}} | }} |
Latest revision as of 01:50, 20 September 2015
Short description: | p1@LGI1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGI1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 2bp_to_uc001kje.2, uc009xui.2_5end |
EntrezGene: | LGI1 |
HGNC: | 6572 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.30e-07 | 5 |