FFCP PHASE1:Hg19::chr1:54519134..54519145,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9528 | |EntrezGene=9528 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1239 | |HGNC=1239 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T706 | |UniProt=Q5T706 | ||
|association_with_transcript=-20bp_to_ENST00000440019_5end | |association_with_transcript=-20bp_to_ENST00000440019_5end | ||
|cluster_id=chr1:54519134..54519145,- | |||
|coexpression_cluster_id=C1 | |coexpression_cluster_id=C1 | ||
|description=CAGE_peak_6_at_TMEM59_5end | |description=CAGE_peak_6_at_TMEM59_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.38e-07;82 | |ontology_enrichment_development_v019=UBERON:0006601;9.38e-07;82 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-20!115;UBERON:0001049!4.78e-13!57;UBERON:0005068!4.78e-13!57;UBERON:0006241!4.78e-13!57;UBERON:0007135!4.78e-13!57;UBERON:0001017!5.58e-13!82;UBERON:0005743!7.75e-13!86;UBERON:0000073!1.61e-12!94;UBERON:0001016!1.61e-12!94;UBERON:0002780!1.28e-11!41;UBERON:0001890!1.28e-11!41;UBERON:0006240!1.28e-11!41;UBERON:0003080!6.31e-11!42;UBERON:0000955!1.51e-10!69;UBERON:0006238!1.51e-10!69;UBERON:0002616!2.39e-10!59;UBERON:0000033!1.54e-09!123;UBERON:0003075!2.47e-09!86;UBERON:0007284!2.47e-09!86;UBERON:0000153!4.87e-09!129;UBERON:0007811!4.87e-09!129;UBERON:0002346!1.60e-08!90;UBERON:0001893!1.85e-08!34;UBERON:0002020!4.79e-08!34;UBERON:0003528!4.79e-08!34;UBERON:0002791!6.67e-08!33;UBERON:0001869!1.60e-07!32;UBERON:0003056!1.85e-07!61;UBERON:0004121!4.29e-07!169 | |ontology_enrichment_uberon=UBERON:0007023!3.52e-20!115;UBERON:0001049!4.78e-13!57;UBERON:0005068!4.78e-13!57;UBERON:0006241!4.78e-13!57;UBERON:0007135!4.78e-13!57;UBERON:0001017!5.58e-13!82;UBERON:0005743!7.75e-13!86;UBERON:0000073!1.61e-12!94;UBERON:0001016!1.61e-12!94;UBERON:0002780!1.28e-11!41;UBERON:0001890!1.28e-11!41;UBERON:0006240!1.28e-11!41;UBERON:0003080!6.31e-11!42;UBERON:0000955!1.51e-10!69;UBERON:0006238!1.51e-10!69;UBERON:0002616!2.39e-10!59;UBERON:0000033!1.54e-09!123;UBERON:0003075!2.47e-09!86;UBERON:0007284!2.47e-09!86;UBERON:0000153!4.87e-09!129;UBERON:0007811!4.87e-09!129;UBERON:0002346!1.60e-08!90;UBERON:0001893!1.85e-08!34;UBERON:0002020!4.79e-08!34;UBERON:0003528!4.79e-08!34;UBERON:0002791!6.67e-08!33;UBERON:0001869!1.60e-07!32;UBERON:0003056!1.85e-07!61;UBERON:0004121!4.29e-07!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.11e-18;41!UBERON:0001890;1.11e-18;41!UBERON:0002619;1.28e-17;22!UBERON:0001893;2.78e-16;34!UBERON:0001869;2.23e-15;32!UBERON:0000956;2.29e-15;25!UBERON:0000203;2.29e-15;25!UBERON:0000073;1.99e-13;53!UBERON:0002616;1.99e-13;53!UBERON:0002791;3.48e-13;32!UBERON:0001950;1.87e-12;20!UBERON:0003528;1.12e-11;34!UBERON:0002020;1.12e-11;34!UBERON:0001905;5.48e-10;2!UBERON:0001954;5.48e-10;2!UBERON:0005162;5.48e-10;2!UBERON:0000122;5.48e-10;2!UBERON:0002757;5.48e-10;2!UBERON:0010134;5.48e-10;2!UBERON:0003022;5.48e-10;2!UBERON:0005408;5.48e-10;2!UBERON:0002421;5.48e-10;2!UBERON:0001899;5.48e-10;2!UBERON:0002600;5.48e-10;2!UBERON:0007023;2.35e-09;114!UBERON:0000955;5.86e-09;68!UBERON:0001872;1.16e-08;5!UBERON:0000349;1.16e-08;5!UBERON:0001017;1.55e-07;75 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.11e-18;41!UBERON:0001890;1.11e-18;41!UBERON:0002619;1.28e-17;22!UBERON:0001893;2.78e-16;34!UBERON:0001869;2.23e-15;32!UBERON:0000956;2.29e-15;25!UBERON:0000203;2.29e-15;25!UBERON:0000073;1.99e-13;53!UBERON:0002616;1.99e-13;53!UBERON:0002791;3.48e-13;32!UBERON:0001950;1.87e-12;20!UBERON:0003528;1.12e-11;34!UBERON:0002020;1.12e-11;34!UBERON:0001905;5.48e-10;2!UBERON:0001954;5.48e-10;2!UBERON:0005162;5.48e-10;2!UBERON:0000122;5.48e-10;2!UBERON:0002757;5.48e-10;2!UBERON:0010134;5.48e-10;2!UBERON:0003022;5.48e-10;2!UBERON:0005408;5.48e-10;2!UBERON:0002421;5.48e-10;2!UBERON:0001899;5.48e-10;2!UBERON:0002600;5.48e-10;2!UBERON:0007023;2.35e-09;114!UBERON:0000955;5.86e-09;68!UBERON:0001872;1.16e-08;5!UBERON:0000349;1.16e-08;5!UBERON:0001017;1.55e-07;75 | ||
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|short_description=p6@TMEM59 | |short_description=p6@TMEM59 | ||
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Latest revision as of 14:31, 18 September 2015
Short description: | p6@TMEM59 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMEM59_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -20bp_to_ENST00000440019_5end |
EntrezGene: | TMEM59 |
HGNC: | 1239 |
UniProt: | Q5T706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data