FFCP PHASE1:Hg19::chr2:166060606..166060607,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:166060606..166060607,-
|short_description=p6@SCN3A
|description=CAGE_peak_6_at_SCN3A_5end
|association_with_transcript=-29bp_to_ENST00000360093,NM_00108167...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6328 | |EntrezGene=6328 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10590 | |HGNC=10590 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NY46,Q9C007 | |UniProt=Q9NY46,Q9C007 | ||
|association_with_transcript=-29bp_to_ENST00000360093,NM_001081676,NM_001081677,NM_006922,uc002ucx.2,uc002ucy.2,uc002ucz.2_5end | |||
|cluster_id=chr2:166060606..166060607,- | |||
|coexpression_cluster_id=C1179 | |||
|description=CAGE_peak_6_at_SCN3A_5end | |||
|id=chr2:166060606..166060607,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.92e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p6@SCN3A | |||
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Latest revision as of 23:33, 17 September 2015
Short description: | p6@SCN3A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SCN3A_5end |
Coexpression cluster: | C1179_parietal_putamen_occipital_medial_caudate_hippocampus_amygdala |
Association with transcript: | -29bp_to_ENST00000360093, NM_001081676, NM_001081677, NM_006922, uc002ucx.2, uc002ucy.2, uc002ucz.2_5end |
EntrezGene: | SCN3A |
HGNC: | 10590 |
UniProt: | Q9NY46Q9C007 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data