FFCP PHASE1:Hg19::chr2:228736335..228736397,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr2:228736335..228736397,+
|short_description=p1@WDR69
|description=CAGE_peak_1_at_WDR69_5end
|association_with_transcript=0bp_to_ENST00000440997,ENST000004549...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=164781 | |EntrezGene=164781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26383 | |HGNC=26383 | ||
|TSSclassifier=strong | |||
|UniProt=C9JP90,F8WCV0,G5EA46 | |UniProt=C9JP90,F8WCV0,G5EA46 | ||
|association_with_transcript=0bp_to_ENST00000440997,ENST00000454999,ENST00000545118_5end | |||
|cluster_id=chr2:228736335..228736397,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_WDR69_5end | |||
|id=chr2:228736335..228736397,+ | |||
|ontology_enrichment_celltype=CL:0000393!1.36e-20!60;CL:0000211!1.36e-20!60;CL:0000680!8.85e-20!57;CL:0000056!8.85e-20!57;CL:0000355!8.85e-20!57;CL:0000187!2.72e-19!54;CL:0000222!5.08e-19!119;CL:0000359!5.86e-19!32;CL:0000183!1.11e-16!59;CL:0000192!8.24e-16!42;CL:0000514!8.24e-16!42;CL:0000055!2.84e-14!180;CL:0002494!2.73e-11!16 | |||
|ontology_enrichment_celltype_v019=CL:0000359;8.56e-22;32!CL:0002494;1.22e-16;16!CL:0000187;2.64e-13;55!CL:0000192;1.14e-12;43!CL:0000393;1.82e-10;61!CL:0000211;1.82e-10;61!CL:0002548;8.51e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,9.86e-24,32;CL:0000187,9.94e-23,55;CL:0000680,7.15e-21,58;CL:0000056,7.15e-21,58;CL:0000355,7.15e-21,58;CL:0000393,3.30e-19,61;CL:0000211,3.30e-19,61;CL:0000222,3.80e-18,121;CL:0000192,1.40e-17,43;CL:0000514,1.40e-17,43;CL:0002494,2.36e-16,16;CL:0002539,9.99e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;1.14e-12;43!CL:0000355;1.22e-11;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;8.18e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.57e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0000025!5.69e-33!194;UBERON:0000119!1.71e-29!312;UBERON:0000483!3.00e-29!309;UBERON:0004872!9.99e-25!84;UBERON:0004111!2.52e-24!241;UBERON:0001637!5.12e-22!42;UBERON:0003509!5.12e-22!42;UBERON:0004572!5.12e-22!42;UBERON:0000477!1.42e-21!286;UBERON:0002049!1.07e-20!79;UBERON:0007798!1.07e-20!79;UBERON:0001981!7.40e-20!60;UBERON:0007500!7.40e-20!60;UBERON:0004537!7.40e-20!60;UBERON:0006965!7.40e-20!60;UBERON:0004535!4.24e-19!110;UBERON:0001009!6.91e-19!113;UBERON:0002616!1.16e-18!59;UBERON:0005743!2.32e-18!86;UBERON:0001017!4.60e-18!82;UBERON:0003075!6.32e-18!86;UBERON:0007284!6.32e-18!86;UBERON:0001049!7.53e-18!57;UBERON:0005068!7.53e-18!57;UBERON:0006241!7.53e-18!57;UBERON:0007135!7.53e-18!57;UBERON:0003914!1.89e-17!118;UBERON:0000055!2.63e-17!69;UBERON:0004290!3.05e-17!70;UBERON:0004573!3.58e-17!33;UBERON:0004571!3.58e-17!33;UBERON:0001134!3.64e-17!61;UBERON:0002036!3.64e-17!61;UBERON:0003082!3.64e-17!61;UBERON:0002346!9.74e-17!90;UBERON:0000914!1.99e-16!83;UBERON:0002329!1.99e-16!83;UBERON:0003077!1.99e-16!83;UBERON:0003059!1.99e-16!83;UBERON:0007282!1.99e-16!83;UBERON:0009618!1.99e-16!83;UBERON:0007285!1.99e-16!83;UBERON:0000475!2.55e-16!365;UBERON:0000073!2.70e-16!94;UBERON:0001016!2.70e-16!94;UBERON:0002780!2.83e-16!41;UBERON:0001890!2.83e-16!41;UBERON:0006240!2.83e-16!41;UBERON:0001869!3.42e-16!32;UBERON:0001893!5.07e-16!34;UBERON:0002020!5.10e-16!34;UBERON:0003528!5.10e-16!34;UBERON:0000955!5.16e-16!69;UBERON:0006238!5.16e-16!69;UBERON:0002385!5.30e-16!63;UBERON:0001015!5.30e-16!63;UBERON:0000383!5.30e-16!63;UBERON:0003080!1.54e-15!42;UBERON:0002791!1.78e-15!33;UBERON:0000481!1.83e-14!347;UBERON:0003056!5.49e-14!61;UBERON:0000486!3.42e-13!82;UBERON:0000153!5.25e-12!129;UBERON:0007811!5.25e-12!129;UBERON:0000956!7.60e-12!25;UBERON:0000203!7.60e-12!25;UBERON:0000033!1.46e-11!123;UBERON:0002619!2.49e-11!22;UBERON:0004121!3.08e-11!169;UBERON:0000468!4.03e-11!659;UBERON:0000490!4.09e-11!138;UBERON:0000924!9.64e-11!173;UBERON:0006601!9.64e-11!173;UBERON:0000922!1.08e-10!612;UBERON:0000947!2.27e-10!21;UBERON:0010191!2.27e-10!21;UBERON:0000948!3.20e-10!24;UBERON:0005498!3.20e-10!24;UBERON:0004140!3.20e-10!24;UBERON:0009881!3.20e-10!24;UBERON:0004141!3.20e-10!24;UBERON:0003084!3.20e-10!24;UBERON:0007005!3.20e-10!24;UBERON:0004139!3.20e-10!24;UBERON:0004291!3.20e-10!24;UBERON:0001950!6.07e-10!20;UBERON:0002050!6.61e-10!605;UBERON:0005423!6.61e-10!605;UBERON:0005256!7.91e-10!143;UBERON:0000467!9.04e-10!625;UBERON:0000923!9.74e-10!604;UBERON:0005291!9.74e-10!604;UBERON:0006598!9.74e-10!604;UBERON:0002532!9.74e-10!604;UBERON:0000480!1.23e-09!626;UBERON:0007100!1.54e-09!27;UBERON:0000064!2.32e-08!219;UBERON:0007023!2.26e-07!115 | |||
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| ||
|short_description=p1@WDR69 | |||
}} | }} |
Latest revision as of 04:30, 25 September 2015
Short description: | p1@WDR69 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_WDR69_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000440997, ENST00000454999, ENST00000545118_5end |
EntrezGene: | WDR69 |
HGNC: | 26383 |
UniProt: | C9JP90F8WCV0G5EA46 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 9.86e-24 | 32 |
muscle cell | 9.94e-23 | 55 |
muscle precursor cell | 7.15e-21 | 58 |
myoblast | 7.15e-21 | 58 |
multi-potent skeletal muscle stem cell | 7.15e-21 | 58 |
electrically responsive cell | 3.30e-19 | 61 |
electrically active cell | 3.30e-19 | 61 |
mesodermal cell | 3.80e-18 | 121 |
smooth muscle cell | 1.40e-17 | 43 |
smooth muscle myoblast | 1.40e-17 | 43 |
cardiocyte | 2.36e-16 | 16 |
aortic smooth muscle cell | 9.99e-07 | 10 |
Ontology term | p-value | n |
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