FFCP PHASE1:Hg19::chr3:156009623..156009647,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:156009623..156009647,+
|short_description=p2@KCNAB1
|description=CAGE_peak_2_at_KCNAB1_5end
|association_with_transcript=-49bp_to_ENST00000389634_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7881 | |EntrezGene=7881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |HGNC=6228 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6W4 | |UniProt=F8W6W4 | ||
|association_with_transcript=-49bp_to_ENST00000389634_5end | |||
|cluster_id=chr3:156009623..156009647,+ | |||
|description=CAGE_peak_2_at_KCNAB1_5end | |||
|id=chr3:156009623..156009647,+ | |||
|ontology_enrichment_celltype=CL:0000359!4.31e-11!32;CL:0000192!8.09e-07!42;CL:0000514!8.09e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.88e-10;32!CL:0002494;3.56e-08;16!CL:0000569;5.08e-08;4!CL:0002595;6.06e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.42e-10,32;CL:0002494,2.88e-08,16;CL:0000569,4.23e-08,4;CL:0000011,4.23e-08,4;CL:0002595,5.90e-07,5;CL:0000192,7.08e-07,43;CL:0000514,7.08e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000011;5.08e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!2.91e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.94e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.02e-12,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.04e-24;32!UBERON:0001893;6.35e-24;34!UBERON:0002791;7.72e-23;32!UBERON:0003528;7.02e-21;34!UBERON:0002020;7.02e-21;34!UBERON:0002619;1.88e-20;22!UBERON:0002780;2.85e-19;41!UBERON:0001890;2.85e-19;41!UBERON:0001950;8.81e-18;20!UBERON:0000956;1.64e-17;25!UBERON:0000203;1.64e-17;25!UBERON:0001637;4.51e-15;42!UBERON:0003509;4.51e-15;42!UBERON:0004572;4.51e-15;42!UBERON:0000073;1.29e-13;53!UBERON:0002616;1.29e-13;53!UBERON:0004573;5.67e-13;33!UBERON:0004571;5.67e-13;33!UBERON:0000955;1.62e-10;68!UBERON:0000200;4.35e-10;6!UBERON:0002118;5.71e-10;5!UBERON:0002420;9.78e-10;9!UBERON:0007245;9.78e-10;9!UBERON:0010009;9.78e-10;9!UBERON:0010011;9.78e-10;9!UBERON:0000454;9.78e-10;9!UBERON:0009663;1.13e-09;7!UBERON:0000947;5.51e-09;21!UBERON:0010191;5.51e-09;21!UBERON:0000992;1.05e-08;13!UBERON:0007500;1.13e-08;56!UBERON:0001981;1.13e-08;56!UBERON:0004537;1.13e-08;56!UBERON:0001017;1.24e-08;75!UBERON:0000369;1.80e-08;4!UBERON:0002435;1.80e-08;4!UBERON:0000204;1.80e-08;4!UBERON:0000055;3.56e-08;65!UBERON:0000125;2.55e-07;9!UBERON:0002308;2.55e-07;9!UBERON:0003834;6.06e-07;5!UBERON:0001533;6.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.55e-29,192;UBERON:0001893,1.17e-27,34;UBERON:0001869,1.79e-27,32;UBERON:0002780,4.21e-26,41;UBERON:0001890,4.21e-26,41;UBERON:0003080,4.21e-26,41;UBERON:0006240,4.21e-26,41;UBERON:0002791,4.73e-25,32;UBERON:0003528,3.28e-23,34;UBERON:0002020,3.28e-23,34;UBERON:0000073,4.91e-23,53;UBERON:0002616,4.91e-23,53;UBERON:0001049,5.55e-23,56;UBERON:0005068,5.55e-23,56;UBERON:0006241,5.55e-23,56;UBERON:0007135,5.55e-23,56;UBERON:0004111,5.79e-23,240;UBERON:0004872,1.26e-21,83;UBERON:0002619,2.92e-20,22;UBERON:0010314,2.79e-19,132;UBERON:0001637,6.41e-19,42;UBERON:0003509,6.41e-19,42;UBERON:0004572,6.41e-19,42;UBERON:0000955,2.15e-18,68;UBERON:0006238,2.15e-18,68;UBERON:0003056,7.15e-18,61;UBERON:0003075,1.10e-17,82;UBERON:0007284,1.10e-17,82;UBERON:0001950,1.45e-17,20;UBERON:0000055,2.37e-17,68;UBERON:0000956,2.41e-17,25;UBERON:0000203,2.41e-17,25;UBERON:0007500,7.20e-17,59;UBERON:0001981,7.20e-17,59;UBERON:0004537,7.20e-17,59;UBERON:0006965,7.20e-17,59;UBERON:0007023,1.38e-16,114;UBERON:0002346,2.07e-16,86;UBERON:0001017,3.52e-15,81;UBERON:0004535,6.10e-15,109;UBERON:0000483,7.14e-15,306;UBERON:0004573,7.82e-15,33;UBERON:0004571,7.82e-15,33;UBERON:0000119,1.53e-14,309;UBERON:0001009,2.97e-14,112;UBERON:0002049,5.27e-14,78;UBERON:0007798,5.27e-14,78;UBERON:0001016,8.93e-14,89;UBERON:0003914,3.35e-13,117;UBERON:0010371,6.10e-12,104;UBERON:0000200,4.26e-10,6;UBERON:0002118,6.74e-10,5;UBERON:0002420,8.92e-10,9;UBERON:0007245,8.92e-10,9;UBERON:0010009,8.92e-10,9;UBERON:0010011,8.92e-10,9;UBERON:0000454,8.92e-10,9;UBERON:0009663,1.17e-09,7;UBERON:0000947,4.37e-09,21;UBERON:0010191,4.37e-09,21;UBERON:0000992,1.19e-08,13;UBERON:0000369,1.99e-08,4;UBERON:0002435,1.99e-08,4;UBERON:0000204,1.99e-08,4;UBERON:0010082,1.99e-08,4;UBERON:0000948,2.26e-07,24;UBERON:0005498,2.26e-07,24;UBERON:0004140,2.26e-07,24;UBERON:0009881,2.26e-07,24;UBERON:0004141,2.26e-07,24;UBERON:0003084,2.26e-07,24;UBERON:0007005,2.26e-07,24;UBERON:0004139,2.26e-07,24;UBERON:0004291,2.26e-07,24;UBERON:0000125,2.60e-07,9;UBERON:0002308,2.60e-07,9;UBERON:0000923,2.75e-07,560;UBERON:0010316,2.75e-07,560;UBERON:0005291,2.75e-07,560;UBERON:0006598,2.75e-07,560;UBERON:0010317,2.75e-07,560;UBERON:0002532,2.75e-07,560;UBERON:0000922,4.40e-07,592;UBERON:0002050,4.43e-07,564;UBERON:0003834,5.90e-07,5;UBERON:0001533,5.90e-07,5 | |||
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| ||
|short_description=p2@KCNAB1 | |||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p2@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNAB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000389634_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | F8W6W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.42e-10 | 32 |
cardiocyte | 2.88e-08 | 16 |
cardiac mesenchymal cell | 4.23e-08 | 4 |
migratory trunk neural crest cell | 4.23e-08 | 4 |
smooth muscle cell of the subclavian artery | 5.90e-07 | 5 |
smooth muscle cell | 7.08e-07 | 43 |
smooth muscle myoblast | 7.08e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.02e-12 | 14 |