FFCP PHASE1:Hg19::chr3:27410847..27410917,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:27410847..27410917,-
|short_description=p1@NEK10
|description=CAGE_peak_1_at_NEK10_5end
|association_with_transcript=0bp_to_ENST00000341435,ENST00000396636...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=152110 | |EntrezGene=152110 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18592 | |HGNC=18592 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZWH5,C9JGJ1,Q8N774 | |UniProt=Q6ZWH5,C9JGJ1,Q8N774 | ||
|association_with_transcript=0bp_to_ENST00000341435,ENST00000396636,ENST00000429845,NM_199347,uc003cdt.1_5end | |||
|cluster_id=chr3:27410847..27410917,- | |||
|coexpression_cluster_id=C596 | |||
|description=CAGE_peak_1_at_NEK10_5end | |||
|id=chr3:27410847..27410917,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.16e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001869;1.63e-44;32!UBERON:0002780;1.96e-44;41!UBERON:0001890;1.96e-44;41!UBERON:0001893;4.59e-43;34!UBERON:0003528;1.62e-42;34!UBERON:0002020;1.62e-42;34!UBERON:0002619;8.56e-42;22!UBERON:0002791;1.26e-41;32!UBERON:0001950;9.93e-38;20!UBERON:0000956;3.74e-36;25!UBERON:0000203;3.74e-36;25!UBERON:0000073;7.63e-36;53!UBERON:0002616;7.63e-36;53!UBERON:0000955;1.05e-22;68!UBERON:0001017;5.09e-22;75!UBERON:0007023;1.77e-16;114!UBERON:0001016;1.18e-15;83!UBERON:0002420;2.32e-15;9!UBERON:0007245;2.32e-15;9!UBERON:0010009;2.32e-15;9!UBERON:0010011;2.32e-15;9!UBERON:0000454;2.32e-15;9!UBERON:0000125;1.73e-14;9!UBERON:0002308;1.73e-14;9!UBERON:0001894;9.75e-14;7!UBERON:0000200;2.46e-13;6!UBERON:0000349;6.74e-12;5!UBERON:0002298;1.53e-11;6!UBERON:0009663;2.36e-11;7!UBERON:0002021;3.61e-11;5!UBERON:0001871;4.34e-11;6!UBERON:0001872;7.13e-11;5!UBERON:0000369;2.87e-10;4!UBERON:0002435;2.87e-10;4!UBERON:0000204;2.87e-10;4!UBERON:0003296;4.30e-09;4!UBERON:0010133;4.30e-09;4!UBERON:0005383;3.64e-08;3!UBERON:0005382;3.64e-08;3!UBERON:0002784;1.01e-07;4!UBERON:0001870;1.14e-07;3!UBERON:0001896;5.73e-07;3!UBERON:0005290;5.73e-07;3!UBERON:0011216;9.58e-07;132!UBERON:0006947;9.85e-07;3!UBERON:0004054;9.85e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.32e-63,53;UBERON:0002616,2.32e-63,53;UBERON:0002780,1.90e-62,41;UBERON:0001890,1.90e-62,41;UBERON:0003080,1.90e-62,41;UBERON:0006240,1.90e-62,41;UBERON:0001049,2.12e-62,56;UBERON:0005068,2.12e-62,56;UBERON:0006241,2.12e-62,56;UBERON:0007135,2.12e-62,56;UBERON:0007023,4.41e-55,114;UBERON:0000955,6.40e-51,68;UBERON:0006238,6.40e-51,68;UBERON:0001869,6.49e-50,32;UBERON:0001893,1.00e-49,34;UBERON:0003528,1.99e-49,34;UBERON:0002020,1.99e-49,34;UBERON:0001017,2.21e-49,81;UBERON:0002791,3.73e-46,32;UBERON:0001016,4.31e-43,89;UBERON:0002619,8.40e-42,22;UBERON:0003056,1.04e-40,61;UBERON:0003075,1.65e-40,82;UBERON:0007284,1.65e-40,82;UBERON:0002346,5.15e-38,86;UBERON:0001950,1.00e-37,20;UBERON:0000956,3.68e-36,25;UBERON:0000203,3.68e-36,25;UBERON:0010371,3.59e-29,104;UBERON:0010314,1.15e-22,132;UBERON:0011216,1.33e-22,223;UBERON:0000025,1.20e-20,192;UBERON:0004121,5.07e-17,171;UBERON:0000924,5.07e-17,171;UBERON:0006601,5.07e-17,171;UBERON:0004111,1.04e-15,240;UBERON:0002420,2.51e-15,9;UBERON:0007245,2.51e-15,9;UBERON:0010009,2.51e-15,9;UBERON:0010011,2.51e-15,9;UBERON:0000454,2.51e-15,9;UBERON:0000125,1.76e-14,9;UBERON:0002308,1.76e-14,9;UBERON:0001894,6.09e-14,7;UBERON:0006222,6.09e-14,7;UBERON:0000200,2.61e-13,6;UBERON:0000349,6.76e-12,5;UBERON:0002298,1.31e-11,6;UBERON:0009663,2.50e-11,7;UBERON:0002021,3.77e-11,5;UBERON:0001871,4.67e-11,6;UBERON:0001872,6.37e-11,5;UBERON:0000369,2.95e-10,4;UBERON:0002435,2.95e-10,4;UBERON:0000204,2.95e-10,4;UBERON:0010082,2.95e-10,4;UBERON:0003296,4.35e-09,4;UBERON:0010133,4.35e-09,4;UBERON:0000483,1.41e-08,306;UBERON:0000119,2.32e-08,309;UBERON:0005383,3.69e-08,3;UBERON:0005382,3.69e-08,3;UBERON:0002784,7.13e-08,4;UBERON:0001870,1.18e-07,3;UBERON:0001896,5.56e-07,3;UBERON:0005290,5.56e-07,3;UBERON:0010096,5.56e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0.123766352960047,0,0,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0.125542639594803,0.152826811495903,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0.293600439334847,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0.334231370655521,0,0.221533894583621,0,0.128091319725675,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.283604451492204,0,0,7.72776545436505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.357198913136319,1.12264686313085,0.563057402416611,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0.103325781175765,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0.337552664482532,0.0974370051611986,0,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0.731842236777572,0.132529768321485,0.348581828608555,0.10366105501537,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0.201057944823262,0,0,0,0,0.34779121492523,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0,0,0,0,0.264145302039678,0,0,0.12624243342638,0.063497894292169,0,0,0,0,0.300343057843917,0.571652865261156,0.112131084345361,0,0.07333828582095,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0.431255149719035,0,0.508189248444927,1.30139853857622,1.54657762555539,0.335032530668698,0,0,0,0,0,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.0821271560138091,0,0.116210378459959,0.483437798366489,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0.340187410553031,0.215915916102139,0,0,0,0,0,0,0,0,0,0.328014645699706,0.650756789328606,3.29731237272711,0,0,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0,0,0,0,0,0,0.682499557039929,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,3.10674542563371,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0.320472213382419,0.962479855263359,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0.169291777801603,0.1605880751037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,15.9063623642608,6.6114625712941,0,0,1.47787785689595,4.78195171802567,0.828851746593443,0,0,0.246169610922139,0,0.0898683511473268,0,0,0.493217028184668,0,0,5.81599647657131,4.73117300625441,0,0,0.0874599999961957,5.07499702804355,0,0,0,0.689486746482929,0,1.73624994933292,15.9433449446491,16.5217120916809,0,0.331737779793674,0.591095237907095,6.14279112031123,0,0,0.461701551022782,0,0.46112780877612,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0.163232808159148,0,0,0,1.14994833854341,0.611030144933625,0.296521128680622,0.247127877893006,0,1.68502832451693,0,4.91955336023212,0,0,0,2.36750641709634,0,3.0607276163049,0.695052375913368,1.50323419414493,0.207376382794494,0,0,0,0,3.69992409838731,0,0,0.293977192243133,0.34823682632161,9.78469342155369,0.687944129886466,0,0,0,0.0969890164884194,0,1.58186518546373,0.137041924646751,0,8.9268222297789,1.36885967914362,0,3.62870091056899,1.19885765749278,1.00863292007874,0.114536596165916,1.02956998717179,0,0.248505071130865,0.471388069233591,0,0,0,0.288950589901519,2.40168115483916,2.19048606227189,5.10986352267889,0.859530882839914,0,0.837847203816763,0.458320848023367,0,0.399358000997982,0.429226048136571,0.223171457441873,1.00775208730089,0,0,3.46646002151784,3.62629776877132,2.76354529802158,2.55911451938347,0,12.7236750369489,5.72054305668618,0.160753148465019,0.412618309791701,0.415440338029185,0,0,7.95819192220123,0,1.02447419488958,0.681909645754975,0,0,0,0.714695326373367,0.662091970365432,0.25426853765475,0,0,0,0,0.082092520749339,0,0.339936274560377,0.146552233678082,0,3.23207390903876,1.58679122091228,0,0,5.23258321581704,34.8993557321258,7.45630299624952,0,0,0,0,0,0,0,0,2.98402782875445,15.9492272394057,6.83347083450994,4.38168257472749,5.73409195690071,4.54809111301094,2.29756690883119,0.415045904808692,0,0.303298235083296,0,0,0,0.579684114443301,0,0,0,0,0,0,0,0.151230923763239,0,0,0.159296767163702,0,0,0,0,0.521745061811734,0,0,0,0,0.107410557042488,0,0.796191777397232,0,0,0,0,0,0.428883182749851,0,0.226705925512272,0,0.489473409012935,1.07453304648892,0,0.219284049578707,0,0.192914038270915,0.168942440653073,0.256241518587947,0,0.303859956177382,4.83904526531058,0,0,0,0.327609848846413,0.737318726261158,0,0,0,0,0,0,0,0,0.127894371303652,0,0.629063767423586,0.218419276384028,0.509197589862076,0,0.495743057036009,0,0,0,0,0,0,11.047426716591,11.3357261060468,4.46974805360024,6.97395638418567,3.02486035466062,5.87836645945852,7.9123066359607,0,0,0,0,0,0.3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| ||
|short_description=p1@NEK10 | |||
}} | }} |
Latest revision as of 21:04, 17 September 2015
Short description: | p1@NEK10 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NEK10_5end |
Coexpression cluster: | C596_testis_medulla_pituitary_caudate_amygdala_hippocampus_putamen |
Association with transcript: | 0bp_to_ENST00000341435, ENST00000396636, ENST00000429845, NM_199347, uc003cdt.1_5end |
EntrezGene: | NEK10 |
HGNC: | 18592 |
UniProt: | Q6ZWH5C9JGJ1Q8N774 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data