FFCP PHASE1:Hg19::chr4:90759440..90759472,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr4:90759440..90759472,-
|short_description=p4@SNCA
|description=CAGE_peak_4_at_SNCA_5end
|association_with_transcript=0bp_to_ENST00000336904,NM_001146055,uc00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6622 | |EntrezGene=6622 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11138 | |HGNC=11138 | ||
|TSSclassifier=strong | |||
|UniProt=P37840 | |UniProt=P37840 | ||
|association_with_transcript=0bp_to_ENST00000336904,NM_001146055,uc003hsr.2_5end | |||
|cluster_id=chr4:90759440..90759472,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_4_at_SNCA_5end | |||
|id=chr4:90759440..90759472,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.77e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-31!57;UBERON:0005068!1.95e-31!57;UBERON:0006241!1.95e-31!57;UBERON:0007135!1.95e-31!57;UBERON:0003075!1.56e-30!86;UBERON:0007284!1.56e-30!86;UBERON:0007023!2.76e-30!115;UBERON:0005743!4.16e-30!86;UBERON:0000033!1.56e-29!123;UBERON:0000073!2.74e-29!94;UBERON:0001016!2.74e-29!94;UBERON:0002346!9.28e-29!90;UBERON:0000153!1.06e-28!129;UBERON:0007811!1.06e-28!129;UBERON:0001017!3.01e-28!82;UBERON:0002616!1.00e-27!59;UBERON:0000955!5.20e-27!69;UBERON:0006238!5.20e-27!69;UBERON:0002780!1.12e-26!41;UBERON:0001890!1.12e-26!41;UBERON:0006240!1.12e-26!41;UBERON:0003056!8.24e-26!61;UBERON:0003080!1.29e-25!42;UBERON:0004121!2.11e-24!169;UBERON:0000924!1.45e-23!173;UBERON:0006601!1.45e-23!173;UBERON:0002020!7.92e-22!34;UBERON:0003528!7.92e-22!34;UBERON:0001893!1.29e-21!34;UBERON:0002791!8.45e-21!33;UBERON:0001869!1.11e-20!32;UBERON:0002619!1.67e-18!22;UBERON:0001950!7.73e-17!20;UBERON:0000956!4.06e-15!25;UBERON:0000203!4.06e-15!25;UBERON:0000119!1.30e-11!312;UBERON:0004111!2.13e-11!241;UBERON:0000483!3.60e-11!309;UBERON:0000477!9.47e-10!286;UBERON:0000025!9.95e-10!194;UBERON:0002420!1.85e-08!9;UBERON:0007245!1.85e-08!9;UBERON:0010009!1.85e-08!9;UBERON:0010011!1.85e-08!9;UBERON:0000454!1.85e-08!9;UBERON:0002308!2.66e-08!9;UBERON:0000125!2.66e-08!9;UBERON:0000475!3.39e-08!365;UBERON:0000064!7.59e-08!219;UBERON:0000922!2.02e-07!612;UBERON:0000481!3.44e-07!347;UBERON:0003076!4.06e-07!15;UBERON:0003057!4.06e-07!15;UBERON:0009663!8.04e-07!7;UBERON:0000200!8.92e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.06e-37;32!UBERON:0003528;2.64e-36;34!UBERON:0002020;2.64e-36;34!UBERON:0002619;3.93e-36;22!UBERON:0002791;3.41e-35;32!UBERON:0002780;4.71e-34;41!UBERON:0001890;4.71e-34;41!UBERON:0001893;5.22e-34;34!UBERON:0001950;8.79e-33;20!UBERON:0000073;1.40e-31;53!UBERON:0002616;1.40e-31;53!UBERON:0000956;4.46e-31;25!UBERON:0000203;4.46e-31;25!UBERON:0001017;3.75e-24;75!UBERON:0000955;9.40e-24;68!UBERON:0001016;2.76e-18;83!UBERON:0002420;1.12e-12;9!UBERON:0007245;1.12e-12;9!UBERON:0010009;1.12e-12;9!UBERON:0010011;1.12e-12;9!UBERON:0000454;1.12e-12;9!UBERON:0000125;1.97e-12;9!UBERON:0002308;1.97e-12;9!UBERON:0000200;5.53e-12;6!UBERON:0007023;8.80e-12;114!UBERON:0004733;1.51e-10;12!UBERON:0002028;1.51e-10;12!UBERON:0002298;2.71e-10;6!UBERON:0001872;6.75e-10;5!UBERON:0000349;7.00e-10;5!UBERON:0001871;1.10e-09;6!UBERON:0002021;1.17e-09;5!UBERON:0000178;1.35e-09;15!UBERON:0000179;1.35e-09;15!UBERON:0000463;1.35e-09;15!UBERON:0004732;1.41e-09;13!UBERON:0009663;1.74e-09;7!UBERON:0001894;5.41e-09;7!UBERON:0011216;5.51e-09;132!UBERON:0000369;2.53e-08;4!UBERON:0002435;2.53e-08;4!UBERON:0000204;2.53e-08;4!UBERON:0003296;1.26e-07;4!UBERON:0010133;1.26e-07;4!UBERON:0001870;6.89e-07;3!UBERON:0002680;8.65e-07;9!UBERON:0001895;8.65e-07;9 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.263766978228454,0.495065411840187,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383829398097213,0,0,0.6024118375565,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.79616152611729,1.33037638477538,0.790513071238134,2.61958150995425,0.364295288292542,0.370784442784429,0,0,0.398873881556595,0.715471872916026,0.571994910780128,0.371457501329565,1.19257444420023,0.860234595106124,0.694281003215189,0,0.838998872419812,0,0.417989933073621,0.516833518338658,0.71153252537342,0,0,0,0.24406205754817,0.735326160691737,0,1.60739510911344,1.34717623575702,1.80178368773316,0,0.949265659568129,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0.269421344139376,0.163461903113459,0,0,0,0.312160076830321,0,0.597794722207204,0.117434498643765,0,0,0.816616685019573,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,1.09098448236334,0.573609190778008,0.243947412259191,0.662648841607426,0.813357600086629,0.725627385107593,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.514703430895577,1.42675371031213,0,1.80952150340936,0.555530670951178,0,0,0,0.579652024875384,0.587043471179108,0.721832238805369,0.925971025153221,0.380508304469197,0,0,1.47730203652438,0,0.891786973732369,0.93733833986777,1.34385702559088,1.13420077793909,0.179117045405697,0,0.383382679165211,0,0,0,0,0,2.22242630022592,1.52795370223311,1.17217447210047,0,1.13110241973656,2.70308752059526,1.42913216315289,0.112131084345361,0.43596006883328,0.1466765716419,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0.60818530127658,0.587403472388222,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00253235151642,0.0920809889358963,0,0,0.655622074797121,0,0.693138033939733,0,0,0.422206515571503,0,0.510281115829547,0.431831832204279,0,0.270946437543853,0,0,0.831076008928724,0,7.89335555925364,6.79732172664741,2.82095137628028,0.328014645699706,0.976135183992909,0.309123034943167,0.183138929636687,0.082509499920588,0,0,0,0,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,0.330569830721956,0.192190067365106,1.78657797492418,0.30347334256665,0,0,0,0,0,0,0.18532421910392,0,0.744316738719335,1.58189712359363,0,0,0.42793898803392,0,0,2.69808686374972,0.54907405947211,0.589062011728432,0,0,0,0.975267478179181,0,0,0,0.282810863907425,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0.717056761020258,0.196498082026242,0,1.06428319221179,0,0,0,0,1.15466535270614,1.34060455107157,0,0,0,0,0.886860307073351,0.229723400206959,211.098205440582,204.922771514157,191.401454890519,20.2497009139121,16.4544909234478,162.118327798179,197.65150602915,216.523173128336,3.31154620495167,0,1.96032172784825,0,0,0,0,0,0.5745161103971,1.69338866179106,0,1.40398589056729,0,0,0,1.52362600021443,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,1.35227839237992,0.99921590399346,0,0,0.293016358543788,0,0,0,0,0,0,9.94147647766298,26.3051808687659,0,0,0,0,0,0.251932747854276,0,0,0,0,0.358042349351218,0,0,23.948309234694,0,11.6319929531426,29.4074871173069,3.99227596002388,0,0,0,3.64139034513599,0,0,0.689486746482929,0.583209226766509,0.347249989866585,13.2861207872076,23.63690197058,4.5774520895125,12.9377734119533,5.31985714116385,39.0506006934071,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0.156980256395025,1.16348177330109,0.225595660617181,0,0.503464760927528,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0.876214728748802,0,6.79366892603483,0,0,0,0,0,3.67287313956588,1.01098527405581,0,0.207376382794494,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,3.38971111170799,0,0,29.5028309154395,0.782205530939212,0,0,0,0,5.8413664044617,0,0,0,0,0,0,0,2.60055530911367,9.00630433064684,3.83335060897581,0,0.429765441419957,0,0,0.458320848023367,0.717873024576814,0.599037001496973,0,0,0.470284307407084,0,0,0,0,0,0.590564889088493,0,23.0616610044698,16.7530189517238,1.12527203925513,0.550157746388935,1.24632101408756,0.674921674654501,0,28.1877942893234,0,0.0788057072991982,0.367182116944987,0.105600336519406,0.717149357331379,0.191915197319445,0,0,0,0,0,0,2.39460383124975,0.082092520749339,0,0,0,2.65013777824443,6.07629894899288,5.15707146796491,1.88195521672762,0,0.320362237703084,0.943225830597996,0,0,0,0,0,0,0,0.306345576763462,0,1.09937867375164,25.6959772190426,38.5602997090204,36.1801789741785,2.29363678276028,4.21530395840039,3.35320575883471,0.138348634936231,0.37494122388632,0.454947352624943,0.856396000634902,0,0,0.579684114443301,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0.380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| ||
|short_description=p4@SNCA | |||
}} | }} |
Latest revision as of 08:52, 19 September 2015
Short description: | p4@SNCA |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNCA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 0bp_to_ENST00000336904, NM_001146055, uc003hsr.2_5end |
EntrezGene: | SNCA |
HGNC: | 11138 |
UniProt: | P37840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data