FFCP PHASE1:Hg19::chr17:2496922..2496954,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5048 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8574 | |||
|TSSclassifier=strong | |||
|UniProt=P43034 | |||
|association_with_transcript=0bp_to_ENST00000397195,NM_000430,uc002fuw.3,uc010ckb.1_5end | |||
|cluster_id=chr17:2496922..2496954,+ | |||
|description=CAGE_peak_1_at_PAFAH1B1_5end | |||
|id=chr17:2496922..2496954,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.84e-19!42;CL:0000766!1.10e-17!76;CL:0000860!2.05e-17!45;CL:0000557!2.23e-15!71;CL:0002009!1.01e-13!65;CL:0000839!1.32e-13!70;CL:0002194!8.10e-13!63;CL:0000576!8.10e-13!63;CL:0000040!8.10e-13!63;CL:0000559!8.10e-13!63;CL:0000738!1.41e-10!140;CL:0002031!4.72e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-17;33!CL:0002057;2.96e-17;33!CL:0000473;4.11e-13;39!CL:0000234;4.11e-13;39!CL:0000576;3.73e-10;48!CL:0000766;1.03e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.84e-19,42;CL:0002057,9.84e-19,42;CL:0000766,2.47e-18,72;CL:0000473,6.23e-17,48;CL:0000234,6.23e-17,48;CL:0000557,5.66e-16,67;CL:0002009,2.68e-14,61;CL:0000839,3.98e-14,66;CL:0002194,2.27e-13,59;CL:0000576,2.27e-13,59;CL:0000040,2.27e-13,59;CL:0000559,2.27e-13,59;CL:0000738,1.04e-10,136;CL:0002031,3.69e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;3.84e-14;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.91e-29!115;UBERON:0001049!2.19e-17!57;UBERON:0005068!2.19e-17!57;UBERON:0006241!2.19e-17!57;UBERON:0007135!2.19e-17!57;UBERON:0002780!3.02e-16!41;UBERON:0001890!3.02e-16!41;UBERON:0006240!3.02e-16!41;UBERON:0002616!4.91e-16!59;UBERON:0003080!3.89e-15!42;UBERON:0002020!3.03e-13!34;UBERON:0003528!3.03e-13!34;UBERON:0001893!3.96e-13!34;UBERON:0000955!4.06e-13!69;UBERON:0006238!4.06e-13!69;UBERON:0002791!1.47e-12!33;UBERON:0001017!2.68e-12!82;UBERON:0002371!2.71e-12!80;UBERON:0001869!2.74e-12!32;UBERON:0003075!2.97e-11!86;UBERON:0007284!2.97e-11!86;UBERON:0005743!3.06e-11!86;UBERON:0004765!4.01e-11!101;UBERON:0001434!4.01e-11!101;UBERON:0001474!4.22e-11!86;UBERON:0000153!5.13e-11!129;UBERON:0007811!5.13e-11!129;UBERON:0002390!5.50e-11!102;UBERON:0003061!5.50e-11!102;UBERON:0002619!8.48e-11!22;UBERON:0000033!2.03e-10!123;UBERON:0002346!5.75e-10!90;UBERON:0001950!9.65e-10!20;UBERON:0000073!2.01e-09!94;UBERON:0001016!2.01e-09!94;UBERON:0000956!2.09e-09!25;UBERON:0000203!2.09e-09!25;UBERON:0002193!2.45e-09!112;UBERON:0000062!4.55e-09!511;UBERON:0003056!1.06e-08!61;UBERON:0004121!3.43e-08!169;UBERON:0000924!1.72e-07!173;UBERON:0006601!1.72e-07!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;6.92e-12;41!UBERON:0001890;6.92e-12;41!UBERON:0001893;1.24e-11;34!UBERON:0003528;3.80e-11;34!UBERON:0002020;3.80e-11;34!UBERON:0001869;5.65e-11;32!UBERON:0000073;6.25e-11;53!UBERON:0002616;6.25e-11;53!UBERON:0002791;6.95e-11;32!UBERON:0002619;8.20e-11;22!UBERON:0001950;9.43e-10;20!UBERON:0000956;2.27e-09;25!UBERON:0000203;2.27e-09;25!UBERON:0007023;4.25e-08;114!UBERON:0001017;3.57e-07;75!UBERON:0000955;4.75e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.43e-28,114;UBERON:0001049,2.17e-18,56;UBERON:0005068,2.17e-18,56;UBERON:0006241,2.17e-18,56;UBERON:0007135,2.17e-18,56;UBERON:0000073,1.77e-17,53;UBERON:0002616,1.77e-17,53;UBERON:0002780,3.02e-16,41;UBERON:0001890,3.02e-16,41;UBERON:0003080,3.02e-16,41;UBERON:0006240,3.02e-16,41;UBERON:0000955,7.50e-14,68;UBERON:0006238,7.50e-14,68;UBERON:0003528,3.03e-13,34;UBERON:0002020,3.03e-13,34;UBERON:0001893,3.96e-13,34;UBERON:0001017,6.21e-13,81;UBERON:0002371,1.12e-12,76;UBERON:0003075,1.50e-12,82;UBERON:0007284,1.50e-12,82;UBERON:0001869,2.74e-12,32;UBERON:0002791,3.77e-12,32;UBERON:0001474,2.10e-11,82;UBERON:0002390,3.21e-11,98;UBERON:0003061,3.21e-11,98;UBERON:0002346,4.09e-11,86;UBERON:0001434,4.61e-11,100;UBERON:0004765,5.01e-11,90;UBERON:0001016,8.22e-11,89;UBERON:0002619,8.48e-11,22;UBERON:0002405,1.49e-10,93;UBERON:0010314,2.89e-10,132;UBERON:0010371,6.51e-10,104;UBERON:0001950,9.65e-10,20;UBERON:0003056,1.19e-09,61;UBERON:0002193,1.70e-09,108;UBERON:0000956,2.09e-09,25;UBERON:0000203,2.09e-09,25;UBERON:0004121,5.02e-08,171;UBERON:0000924,5.02e-08,171;UBERON:0006601,5.02e-08,171;UBERON:0002050,6.99e-07,564 | |||
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| |||
|short_description=p1@PAFAH1B1 | |||
}} |
Latest revision as of 03:28, 19 September 2015
Short description: | p1@PAFAH1B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAFAH1B1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000397195, NM_000430, uc002fuw.3, uc010ckb.1_5end |
EntrezGene: | PAFAH1B1 |
HGNC: | 8574 |
UniProt: | P43034 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.84e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.84e-19 | 42 |
myeloid leukocyte | 2.47e-18 | 72 |
defensive cell | 6.23e-17 | 48 |
phagocyte | 6.23e-17 | 48 |
granulocyte monocyte progenitor cell | 5.66e-16 | 67 |
macrophage dendritic cell progenitor | 2.68e-14 | 61 |
myeloid lineage restricted progenitor cell | 3.98e-14 | 66 |
monopoietic cell | 2.27e-13 | 59 |
monocyte | 2.27e-13 | 59 |
monoblast | 2.27e-13 | 59 |
promonocyte | 2.27e-13 | 59 |
leukocyte | 1.04e-10 | 136 |
hematopoietic lineage restricted progenitor cell | 3.69e-08 | 120 |