FFCP PHASE1:Hg19::chr9:10612660..10612702,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:10612660..10612702,-
|short_description=p3@PTPRD
|description=CAGE_peak_3_at_PTPRD_5end
|association_with_transcript=20bp_to_ENST00000463477,NM_002839,uc00...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5789 | |EntrezGene=5789 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9668 | |HGNC=9668 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8S8,P23468,Q2HXI4 | |UniProt=C9J8S8,P23468,Q2HXI4 | ||
|association_with_transcript=20bp_to_ENST00000463477,NM_002839,uc003zkt.1_5end | |||
|cluster_id=chr9:10612660..10612702,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_3_at_PTPRD_5end | |||
|id=chr9:10612660..10612702,- | |||
|ontology_enrichment_celltype=CL:0000047!1.50e-08!8 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.96e-18;82!UBERON:0006241;4.09e-10;3!UBERON:0003057;4.09e-10;3!UBERON:0010122;4.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.41e-66!82;UBERON:0005743!1.60e-64!86;UBERON:0001049!1.13e-63!57;UBERON:0005068!1.13e-63!57;UBERON:0006241!1.13e-63!57;UBERON:0007135!1.13e-63!57;UBERON:0000073!4.32e-59!94;UBERON:0001016!4.32e-59!94;UBERON:0002780!9.38e-58!41;UBERON:0001890!9.38e-58!41;UBERON:0006240!9.38e-58!41;UBERON:0003080!3.85e-56!42;UBERON:0002616!2.91e-52!59;UBERON:0001893!1.29e-51!34;UBERON:0002020!1.98e-51!34;UBERON:0003528!1.98e-51!34;UBERON:0000955!8.35e-50!69;UBERON:0006238!8.35e-50!69;UBERON:0002791!1.49e-49!33;UBERON:0001869!2.16e-48!32;UBERON:0003075!8.29e-44!86;UBERON:0007284!8.29e-44!86;UBERON:0002346!4.04e-43!90;UBERON:0001950!2.42e-41!20;UBERON:0002619!3.86e-41!22;UBERON:0003056!1.63e-37!61;UBERON:0007023!9.94e-37!115;UBERON:0000956!1.39e-35!25;UBERON:0000203!1.39e-35!25;UBERON:0000924!2.32e-32!173;UBERON:0006601!2.32e-32!173;UBERON:0004121!2.91e-32!169;UBERON:0000033!1.06e-27!123;UBERON:0000153!8.81e-26!129;UBERON:0007811!8.81e-26!129;UBERON:0002420!1.05e-17!9;UBERON:0007245!1.05e-17!9;UBERON:0010009!1.05e-17!9;UBERON:0010011!1.05e-17!9;UBERON:0000454!1.05e-17!9;UBERON:0002308!3.25e-17!9;UBERON:0000125!3.25e-17!9;UBERON:0000025!2.55e-14!194;UBERON:0000200!3.71e-14!6;UBERON:0001871!5.01e-14!7;UBERON:0009663!1.09e-13!7;UBERON:0002021!2.04e-12!5;UBERON:0001872!5.19e-12!5;UBERON:0002298!1.20e-11!8;UBERON:0004111!2.02e-11!241;UBERON:0000064!1.25e-10!219;UBERON:0003076!1.01e-09!15;UBERON:0003057!1.01e-09!15;UBERON:0000483!4.55e-09!309;UBERON:0000369!5.60e-09!4;UBERON:0002435!5.60e-09!4;UBERON:0000204!5.60e-09!4;UBERON:0010082!5.60e-09!4;UBERON:0000119!7.62e-09!312;UBERON:0000477!1.20e-08!286;UBERON:0002771!4.95e-08!3;UBERON:0000475!6.10e-08!365;UBERON:0001894!1.04e-07!7;UBERON:0006222!1.04e-07!7;UBERON:0000349!1.06e-07!5;UBERON:0000922!1.97e-07!612;UBERON:0002050!2.76e-07!605;UBERON:0005423!2.76e-07!605;UBERON:0002240!4.52e-07!3;UBERON:0000988!4.62e-07!3;UBERON:0005383!5.68e-07!3;UBERON:0005382!5.68e-07!3;UBERON:0000923!7.56e-07!604;UBERON:0005291!7.56e-07!604;UBERON:0006598!7.56e-07!604;UBERON:0002532!7.56e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0001950;1.70e-63;20!UBERON:0002619;1.93e-63;22!UBERON:0001869;1.54e-62;32!UBERON:0001893;3.47e-61;34!UBERON:0003528;5.91e-61;34!UBERON:0002020;5.91e-61;34!UBERON:0002791;3.12e-58;32!UBERON:0002780;3.85e-57;41!UBERON:0001890;3.85e-57;41!UBERON:0000956;1.95e-55;25!UBERON:0000203;1.95e-55;25!UBERON:0000073;1.93e-45;53!UBERON:0002616;1.93e-45;53!UBERON:0001017;4.33e-35;75!UBERON:0000955;5.78e-33;68!UBERON:0001016;2.29e-26;83!UBERON:0000200;4.92e-21;6!UBERON:0002021;2.56e-18;5!UBERON:0001871;7.46e-18;6!UBERON:0001872;1.05e-17;5!UBERON:0002420;8.51e-17;9!UBERON:0007245;8.51e-17;9!UBERON:0010009;8.51e-17;9!UBERON:0010011;8.51e-17;9!UBERON:0000454;8.51e-17;9!UBERON:0000125;2.93e-16;9!UBERON:0002308;2.93e-16;9!UBERON:0000369;4.96e-13;4!UBERON:0002435;4.96e-13;4!UBERON:0000204;4.96e-13;4!UBERON:0002298;1.04e-12;6!UBERON:0007023;1.14e-12;114!UBERON:0001870;1.76e-11;3!UBERON:0001894;2.08e-11;7!UBERON:0000349;2.76e-11;5!UBERON:0009663;4.21e-11;7!UBERON:0011216;1.19e-10;132!UBERON:0002240;4.09e-10;3!UBERON:0005174;4.09e-10;3!UBERON:0001137;4.09e-10;3!UBERON:0000988;4.73e-10;3!UBERON:0005383;6.20e-10;3!UBERON:0005382;6.20e-10;3!UBERON:0002771;2.94e-08;2!UBERON:0002702;3.88e-08;2!UBERON:0001876;5.86e-08;2!UBERON:0010314;1.10e-07;132!UBERON:0000007;1.69e-07;2!UBERON:0001897;1.83e-07;2!UBERON:0010225;1.83e-07;2!UBERON:0002148;3.14e-07;2!UBERON:0006331;3.14e-07;2!UBERON:0009662;3.14e-07;2!UBERON:0001873;4.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.06e-89,56;UBERON:0005068,1.06e-89,56;UBERON:0006241,1.06e-89,56;UBERON:0007135,1.06e-89,56;UBERON:0001017,5.30e-86,81;UBERON:0000073,2.19e-81,53;UBERON:0002616,2.19e-81,53;UBERON:0002780,6.50e-81,41;UBERON:0001890,6.50e-81,41;UBERON:0003080,6.50e-81,41;UBERON:0006240,6.50e-81,41;UBERON:0001016,1.84e-76,89;UBERON:0000955,1.16e-71,68;UBERON:0006238,1.16e-71,68;UBERON:0001893,1.04e-70,34;UBERON:0003528,1.94e-70,34;UBERON:0002020,1.94e-70,34;UBERON:0001869,2.62e-70,32;UBERON:0002791,6.74e-65,32;UBERON:0001950,1.73e-63,20;UBERON:0002619,2.00e-63,22;UBERON:0003075,2.45e-58,82;UBERON:0007284,2.45e-58,82;UBERON:0000956,2.01e-55,25;UBERON:0000203,2.01e-55,25;UBERON:0002346,3.54e-55,86;UBERON:0003056,6.18e-52,61;UBERON:0010371,2.04e-46,104;UBERON:0007023,4.61e-37,114;UBERON:0004121,9.04e-37,171;UBERON:0000924,9.04e-37,171;UBERON:0006601,9.04e-37,171;UBERON:0010314,1.69e-34,132;UBERON:0011216,8.02e-30,223;UBERON:0000025,9.58e-22,192;UBERON:0000200,5.10e-21,6;UBERON:0002021,2.52e-18,5;UBERON:0001871,7.58e-18,6;UBERON:0001872,1.07e-17,5;UBERON:0002420,8.84e-17,9;UBERON:0007245,8.84e-17,9;UBERON:0010009,8.84e-17,9;UBERON:0010011,8.84e-17,9;UBERON:0000454,8.84e-17,9;UBERON:0000125,3.48e-16,9;UBERON:0002308,3.48e-16,9;UBERON:0004111,2.45e-15,240;UBERON:0000369,5.13e-13,4;UBERON:0002435,5.13e-13,4;UBERON:0000204,5.13e-13,4;UBERON:0010082,5.13e-13,4;UBERON:0002298,9.89e-13,6;UBERON:0003076,5.01e-12,15;UBERON:0003057,5.01e-12,15;UBERON:0001870,1.76e-11,3;UBERON:0001894,1.95e-11,7;UBERON:0006222,1.95e-11,7;UBERON:0000349,2.83e-11,5;UBERON:0009663,4.36e-11,7;UBERON:0000483,1.30e-10,306;UBERON:0000119,2.07e-10,309;UBERON:0002240,4.43e-10,3;UBERON:0005174,4.43e-10,3;UBERON:0001137,4.43e-10,3;UBERON:0000988,4.58e-10,3;UBERON:0005383,6.30e-10,3;UBERON:0005382,6.30e-10,3;UBERON:0002771,3.04e-08,2;UBERON:0002702,3.88e-08,2;UBERON:0001876,5.86e-08,2;UBERON:0000007,1.77e-07,2;UBERON:0001897,1.83e-07,2;UBERON:0010225,1.83e-07,2;UBERON:0001873,3.40e-07,2;UBERON:0010122,3.40e-07,2;UBERON:0002148,3.75e-07,2;UBERON:0006331,3.75e-07,2;UBERON:0009662,3.75e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,18.8888053075597,12.6602474769461,0,0,5.91151142758382,0,0,0,0,0,0,0,0,0,0,0,0,10.6626602070474,8.62743312905217,19.9613798001194,0,0,0,0,0,0,1.03423011972439,0.291604613383254,12.8482496250636,2.65722415744152,1.68835014075571,0,0,0,3.94893714877151,0,2.37020365273626,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0.802577647298789,2.81117334870407,0,0,0,0,0,27.2404757851136,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2610075863956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,8.44461117891769,0,0.275078873194468,0,0,0,21.0193466036765,0,0,0,0,0,0,0,0,4.068296602476,0.542999601753713,0,0,0,0,0,0,0,0,3.49063982176186,1.05786081394152,0,0,0.106787412567695,2.82967749179399,0.828478110694391,0,0,0,0,0,0,0,0,0,16.8352954193727,20.1343337088239,23.786276834235,1.14681839138014,0.887432412294818,1.80079568530012,0,0,0,0,0,0,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1952263265529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,13.1669911447742,28.339315265117,30.0111655027444,20.921869152557,41.3397581803618,20.4013894769443,17.1164184369762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6948471700194,6.24862478891078,22.9422344116314,15.7905367382828,47.5868083845851,0,0.496211178389294,0.175871244359621,0.255524855279191,0,0,2.42786241694653,7.51285231459282,0,0,0,2.9906682509806,18.4821493711606,0,0.111231401892069,0.078493092850514,2.04250266890802,0,0.913158720509496,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0.475680363110274,0,0,0,0,0.218559560503957,0,0,0,2.1593931382644,2.67341760294377,2.5359343655004,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,13.530306547992,41.4533155823359,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,5.80418607621146,2.58582489654738,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.29213382120997,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286804595389004,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,2.60279707715243,1.54657762555539,1.17261385734044,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14851441245126,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47748896947538,0,0,18.8888053075597,12.6602474769461,0,0,5.91151142758382,0,0,0,0,0,0,0,0,0,0,0,0,10.6626602070474,8.62743312905217,19.9613798001194,0,0,0,0,0,0,1.03423011972439,0.291604613383254,12.8482496250636,2.65722415744152,1.68835014075571,0,0,0,3.94893714877151,0,2.37020365273626,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21322039365219,0.802577647298789,2.81117334870407,0,0,0,0,0,27.2404757851136,0.695052375913368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2610075863956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,0.958337652243951,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,8.44461117891769,0,0.275078873194468,0,0,0,21.0193466036765,0,0,0,0,0,0,0,0,4.068296602476,0.542999601753713,0,0,0,0,0,0,0,0,3.49063982176186,1.05786081394152,0,0,0.106787412567695,2.82967749179399,0.828478110694391,0,0,0,0,0,0,0,0,0,16.8352954193727,20.1343337088239,23.786276834235,1.14681839138014,0.887432412294818,1.80079568530012,0,0,0,0,0,0,3.91286777249228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.1952263265529,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,13.1669911447742,28.339315265117,30.0111655027444,20.921869152557,41.3397581803618,20.4013894769443,17.1164184369762,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.6948471700194,6.24862478891078,22.9422344116314,15.7905367382828,47.5868083845851,0,0.496211178389294,0.175871244359621,0.255524855279191,0,0,2.42786241694653,7.51285231459282,0,0,0,2.9906682509806,18.4821493711606,0,0.111231401892069,0.078493092850514,2.04250266890802,0,0.913158720509496,0,0,0.214429632529969,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0.233939463462106,0,0.475680363110274,0,0,0,0,0.218559560503957,0,0,0,2.1593931382644,2.67341760294377,2.5359343655004,0,0,0,0,0,0,0,0.730336388246517,0,0.143339583151451,0.157771562193185,13.530306547992,41.4533155823359,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,5.80418607621146,2.58582489654738,0,0,0,0,0,0,0,0,0.342233301085281,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0.813792356631477,0,0,0 | ||
|short_description=p3@PTPRD | |||
}} | }} |
Latest revision as of 22:32, 19 September 2015
Short description: | p3@PTPRD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PTPRD_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 20bp_to_ENST00000463477, NM_002839, uc003zkt.1_5end |
EntrezGene: | PTPRD |
HGNC: | 9668 |
UniProt: | C9J8S8P23468Q2HXI4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data