FFCP PHASE1:Hg19::chr1:54519134..54519145,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9528 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1239 | |||
|TSSclassifier=strong | |||
|UniProt=Q5T706 | |||
|association_with_transcript=-20bp_to_ENST00000440019_5end | |||
|cluster_id=chr1:54519134..54519145,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_6_at_TMEM59_5end | |||
|id=chr1:54519134..54519145,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.38e-07;82 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.52e-20!115;UBERON:0001049!4.78e-13!57;UBERON:0005068!4.78e-13!57;UBERON:0006241!4.78e-13!57;UBERON:0007135!4.78e-13!57;UBERON:0001017!5.58e-13!82;UBERON:0005743!7.75e-13!86;UBERON:0000073!1.61e-12!94;UBERON:0001016!1.61e-12!94;UBERON:0002780!1.28e-11!41;UBERON:0001890!1.28e-11!41;UBERON:0006240!1.28e-11!41;UBERON:0003080!6.31e-11!42;UBERON:0000955!1.51e-10!69;UBERON:0006238!1.51e-10!69;UBERON:0002616!2.39e-10!59;UBERON:0000033!1.54e-09!123;UBERON:0003075!2.47e-09!86;UBERON:0007284!2.47e-09!86;UBERON:0000153!4.87e-09!129;UBERON:0007811!4.87e-09!129;UBERON:0002346!1.60e-08!90;UBERON:0001893!1.85e-08!34;UBERON:0002020!4.79e-08!34;UBERON:0003528!4.79e-08!34;UBERON:0002791!6.67e-08!33;UBERON:0001869!1.60e-07!32;UBERON:0003056!1.85e-07!61;UBERON:0004121!4.29e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.11e-18;41!UBERON:0001890;1.11e-18;41!UBERON:0002619;1.28e-17;22!UBERON:0001893;2.78e-16;34!UBERON:0001869;2.23e-15;32!UBERON:0000956;2.29e-15;25!UBERON:0000203;2.29e-15;25!UBERON:0000073;1.99e-13;53!UBERON:0002616;1.99e-13;53!UBERON:0002791;3.48e-13;32!UBERON:0001950;1.87e-12;20!UBERON:0003528;1.12e-11;34!UBERON:0002020;1.12e-11;34!UBERON:0001905;5.48e-10;2!UBERON:0001954;5.48e-10;2!UBERON:0005162;5.48e-10;2!UBERON:0000122;5.48e-10;2!UBERON:0002757;5.48e-10;2!UBERON:0010134;5.48e-10;2!UBERON:0003022;5.48e-10;2!UBERON:0005408;5.48e-10;2!UBERON:0002421;5.48e-10;2!UBERON:0001899;5.48e-10;2!UBERON:0002600;5.48e-10;2!UBERON:0007023;2.35e-09;114!UBERON:0000955;5.86e-09;68!UBERON:0001872;1.16e-08;5!UBERON:0000349;1.16e-08;5!UBERON:0001017;1.55e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.72e-25,114;UBERON:0002780,1.74e-23,41;UBERON:0001890,1.74e-23,41;UBERON:0003080,1.74e-23,41;UBERON:0006240,1.74e-23,41;UBERON:0000073,1.48e-22,53;UBERON:0002616,1.48e-22,53;UBERON:0001049,3.79e-21,56;UBERON:0005068,3.79e-21,56;UBERON:0006241,3.79e-21,56;UBERON:0007135,3.79e-21,56;UBERON:0000955,6.24e-21,68;UBERON:0006238,6.24e-21,68;UBERON:0003056,4.90e-19,61;UBERON:0001893,5.54e-19,34;UBERON:0002619,8.08e-18,22;UBERON:0001869,3.42e-17,32;UBERON:0001017,6.41e-17,81;UBERON:0003075,9.34e-17,82;UBERON:0007284,9.34e-17,82;UBERON:0001016,1.44e-16,89;UBERON:0002346,8.97e-16,86;UBERON:0000956,1.53e-15,25;UBERON:0000203,1.53e-15,25;UBERON:0002791,2.79e-14,32;UBERON:0003528,2.44e-13,34;UBERON:0002020,2.44e-13,34;UBERON:0001950,1.23e-12,20;UBERON:0010314,2.66e-12,132;UBERON:0010371,2.75e-12,104;UBERON:0005162,4.42e-10,2;UBERON:0000122,4.42e-10,2;UBERON:0001954,5.81e-10,2;UBERON:0003022,5.81e-10,2;UBERON:0002421,5.81e-10,2;UBERON:0002600,5.81e-10,2;UBERON:0001905,2.63e-09,2;UBERON:0002757,2.63e-09,2;UBERON:0010134,2.63e-09,2;UBERON:0005408,2.63e-09,2;UBERON:0001899,2.63e-09,2;UBERON:0001872,8.10e-09,5;UBERON:0000349,1.88e-08,5;UBERON:0004121,2.53e-08,171;UBERON:0000924,2.53e-08,171;UBERON:0006601,2.53e-08,171;UBERON:0011216,2.97e-08,223 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0,0,0,0.631719873426831,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0.247532705920093,0.331397375727916,0,0.602694528023977,0,0,0.123121058076788,0,0,0.286235987131057,0.273748850145768,0.125542639594803,0,0,0.0787107813136792,0.393364276848904,0.767658796194425,0.154816123316076,1.83884244895785,0,0.739508020333575,0,0,0.293600439334847,1.10799081706375,0,0.217010870715852,0.223915474239924,0,0.257575567634187,0.145398238779565,0,0.242584061187816,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0.224723484445085,0,0.641858054152187,0,0.329851300186716,0,0,0.290209238628584,0,0,0,0,0,0,0.368277635987565,0.632924774881769,0.422510572623884,0,0,0,0.300353785683013,0.32145117339416,0,0.19891667719909,0,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0,0.382273228125229,0,1.12101712596307,0,0.196709770113833,0,0,0,0.977766799900771,1.89379122293893,0,0,0,0.221533894583621,0.270803863765016,0.128091319725675,0.130059347559878,0.328875809207352,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0.383220493601921,0,0,0,0,0,0.451725357233318,0,1.24930726552346,0.473554504088034,0.821127996921047,0.403213486449465,0.534880391567015,0.289648807765598,0,0,0.255725123687061,0,0,0,0,0,0,0,0.087834785693126,4.06035134042909,1.09288586487763,0,0,0,0.132957960518865,0.476981248610684,0,0,0.198762407366705,0,0,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.379891534993739,0.397227542439656,0.286836620748814,0,0,0,0,0,0.404132016209064,0.163461903113459,0.302714855289863,0,0,0,0,0.149448680551801,0.23486899728753,0.161872944368132,0.140450806702248,0.408308342509787,0.122834317311768,0.103325781175765,0,0,0,0.718618141816238,0.336672227908132,0.375355559615893,0,0.877955241761676,0,0.150238058906597,0.567160915800105,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0,0.18611685633159,0.168776332241266,0.292311015483596,0.252433774244115,0.276149695926898,0.161646056818812,0,0.503760491138201,0.169560592310488,0.193260853163297,0.272746120590835,0,0.243947412259191,0.795178609928912,0,0.518305275076852,0,0,0,0.643240938192885,0,0,0,0.473227200159376,0.674338760312407,0.482022059766964,0.772057809126758,1.08939722046203,0.474541238222193,0.404493924480493,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.686271241194102,0.219500570817251,0,0.502644862058154,0.370353780634118,0,0,0,0.34779121492523,0,0.288732895522148,0,0.190254152234598,0,0.858486162094873,0.492434012174795,0,0,0.93733833986777,0.503946384596579,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,0.492663237895943,0.088048434013226,0.414656231081544,0.432359860250884,0.25248486685276,0.063497894292169,0,0,1.71072446022705,0,0.300343057843917,0,0.560655421726804,0,0.07333828582095,0.517086863031111,0,0,0.26593811658487,0,0.514414748524284,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0.602878754119172,0.871533458600294,0.199945982364114,0,0,0,0.239624855491583,0,0,0.723906533337896,0.410952645100767,0.358121926479791,0,0,0,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0.637938751653163,0.749007023947182,0,1.24324654030811,0.24538298343828,0,0.542530047399471,0.207970861530807,0,0.315404830067869,0,0.601892199455438,0,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.256278298511402,1.53512174720011,0.160853921143607,0,0.771048469013278,0.177561725313127,0.328508624055237,0,0.116210378459959,0,0.40101294060657,0.0920809889358963,0.229628896329213,0.364182336013434,0.524497659837696,0.451199612907412,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0.438519753291869,0.522870902049801,0,0,0.976135183992909,0.309123034943167,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0,0.460511024178389,0.275673144969061,0.107420244868274,0.290033387828457,0.170453254832202,0.356128142586949,0.330569830721956,0.192190067365106,0,0,0,0.94443704049192,0,0,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0,0,0,0.318203247925937,0,0.179872457583315,0,0.117812402345686,0.404364963146632,0,1.26377536871694,0,0,0,0.409499734223957,0.282810863907425,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0.30982349809975,0.281695602532241,0.573645408816206,0.392996164052485,0.35667105148125,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0.288666338176536,0,0,0.282431402330337,0,0,0.443430153536676,0.229723400206959,0.507447609232169,0.764637207142375,1.70894156152249,0.238231775457789,0.411362273086194,0.648473311192717,0.540031437238115,0.79312517629427,0,0.962479855263359,0.735120647943095,0,0,0.142283686696828,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0.687010689511529,0.307240764308458,0.223676107892416,0.333698283423817,0,0,0,0,0,0,0.18714054040822,0.293016358543788,0.36408156524854,0,0,0,0.296964680832639,0,0,0.562677665642051,0.222617410045812,0.16480387422676,0.211125408127993,0.398495976502139,0.276283915531148,0.503865495708552,0.306806047506464,0,0.933118762985422,0.179736702294654,1.07412704805365,0,0.887790650732402,0,0,3.87733098438087,1.57705766875147,0,0,0.437299999980979,0,0.568967241427498,0.254253650292766,0.236387681767936,0.344743373241465,0.874813840149763,0.347249989866585,0,0.723578631752448,0,0.110579259931225,0.886642856860642,0.87754158861589,0.32681539055697,0.139423744278603,0.153900517007594,0.683652335082007,0.46112780877612,0.0897576444097721,0.108647371922008,0.638002319463839,0.0915975934018623,0,0,0,0.166211681900156,0.676786981851542,0.588187602953219,0.503464760927528,0.948768663620925,0.158936578980379,0,0.163232808159148,0,0.216388639742091,0,0.442287822516696,0,0,0,0.104421949505455,1.34802265961354,0,1.1713222286267,0,0,0.242780379534093,0.394584402849391,0,0,0.695052375913368,0,0.72581733978073,0,0.330991955875499,0,0,0,0.138674673013139,0,0.587954384486266,0.174118413160805,0.34945333648406,0.171986032471617,0.387025325156341,0.584714536689484,0.164230914106418,0.775912131907355,0,1.12990370390266,0.274083849293502,0.397429223405979,1.2029051231617,0.195551382734803,0.240476460754601,0,0.39961921916426,0,0,0.171594997861965,0.720273989940749,0.124252535565433,0,0.67952103036807,0.209205692624666,0.203996435272644,0,0.600420288709789,0.547621515567972,0,0.429765441419957,0.262887354279314,0,0.229160424011684,0,0.199679000498991,1.71690419254628,0.89268582976749,0.403100834920358,0,0,0.157566364614447,0.164831716762333,0.0674035438541849,0.196854963029498,0.423366660328922,1.59045937961861,1.0896272488926,0.321506296930038,0.275078873194468,0.83088067605837,0.674921674654501,0,1.21499113316049,0,0.315222829196793,0.367182116944987,0.316801009558219,0.35857467866569,0.383830394638891,0.714695326373367,0,0,1.08599920350743,0,0.979762080328227,0,0.082092520749339,0,0.566560457600628,0.293104467356165,0,0.517131825446202,0.66116300871345,0.342173675768659,0.704815022316672,0.320362237703084,0.157204305099666,0,0,0,0,0,0.544017803369474,0,0,0.983617892129413,0.471162288750703,0.886068179966986,0.854183854313742,0.250381861413,1.14681839138014,0.554645257684261,0.931446044120752,0.138348634936231,0.37494122388632,0,0,0,0,0.28984205722165,0.298509605773748,0,0.554805861502613,0,0.251567901752575,0.889811221596536,0.457680136793847,0.302461847526478,0.310874401165561,0.295710299979268,0.477890301491107,0,0.465788870628778,0,0,0,0.150257608997218,0,0.813741466409323,0.363697318405119,0.214821114084977,0.464033759878494,0.398095888698616,0.800055529326307,0,0.336749488765919,0,0.385239660814607,0,0,0,0,0,0.537266523244462,0.308801447160972,0,0,0.192914038270915,0.506827321959218,0.256241518587947,0.690860683462397,0,0.414775308455192,0,0.132864840313363,0.163565394255844,0.327609848846413,0.245772908753719,0,0,0.320075189082423,0.344429959321631,0,0.184105950251841,0.699397538597222,0,0.127894371303652,0.323474434190045,0,0.436838552768056,0,0.637724760305049,0,0.558644917973244,0.318004350653419,0.0788617450012534,0.80057074828547,0.352675943690684,0.6124909547064,1.02766760154335,0,0.638535436228605,1.43581454968528,0.504143392443436,1.45230230174858,1.45328081068666,1.42769420259154,0.392590874004102,0.353909170043221,0.550285795565037,0.115525666150338,0.762764190934334,0,0.397832444232549,0.82731361184183,0,0,0.523813388962845,0.49131575253029,0.295712172434091,1.68843961545987,0.781078098613847,1.2401207790071,1.58539525484767,0,1.64477330057155,0,0,0.127762427639595,1.07140367175657,1.00885116665647,0.606965604236632,0.455324382702595,0.354809480650555,0.115233987555779,0.171488009437418,1.63127359144396,1.51277379194553,0,0.333694205676207,0.78493092850514,0.314231179832004,0,0,0.215927591218621,0.47775168788705,0.714765441766563,0.158013611732727,0.116241425368125,0.521574816907738,0,0.207216164163037,0.51215543128185,0,0,0,0,0.423387050190929,0.22910686854405,0.31020638566432,0,0.111855431797792,0.196300467230486,0.243835849964539,0,0.615976841137482,0,0,0,0,0.118920090777569,0.22589216407792,0.219881033490858,0.301925687133347,0.231522474323834,0,0.470317296361523,0,0.235676547101626,0.981542335574726,0.891139200981258,0.8453114551668,0,0.0939839179798536,0,0.199882311849858,0.178553938605658,0,1.28386186702669,0,0,0.716697915757256,0.157771562193185,1.63179576458195,0,0,0,0,0,0.504665699340316,0.218531143927391,0.380095503034311,0.509944148709909,0.534434810531121,0.0918948995348449,0.50141507858475,6.21385325389563,10.1826369459348,0.829169439458779,0.930896962757057,0,0.476128862927481,0.0645889098360061,0.0620747142958579,0.33639558774184,1.01835453245064,0.808468755832877,0.653150243690884,0.684466602170562,0.471464371102113,0.932388670104793,0,0.0814032686109745,0.106727345877715,0,0.449126010532934,0,0.366724332548599,0,0,0.201273793591026,0 | |||
|short_description=p6@TMEM59 | |||
}} |
Latest revision as of 14:31, 18 September 2015
Short description: | p6@TMEM59 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_TMEM59_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -20bp_to_ENST00000440019_5end |
EntrezGene: | TMEM59 |
HGNC: | 1239 |
UniProt: | Q5T706 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data