FFCP PHASE1:Hg19::chr3:33700553..33700575,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23122 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17078 | |||
|TSSclassifier=strong | |||
|UniProt=E3W994 | |||
|association_with_transcript=21bp_to_ENST00000461133_5end | |||
|cluster_id=chr3:33700553..33700575,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_CLASP2_5end | |||
|id=chr3:33700553..33700575,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.01e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,9.78e-09,5;CL:0002028,9.78e-09,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.61e-19;82!UBERON:0006215;9.06e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!5.05e-50!115;UBERON:0000073!1.53e-46!94;UBERON:0001016!1.53e-46!94;UBERON:0001017!4.19e-46!82;UBERON:0005743!2.20e-45!86;UBERON:0001049!4.36e-42!57;UBERON:0005068!4.36e-42!57;UBERON:0006241!4.36e-42!57;UBERON:0007135!4.36e-42!57;UBERON:0000955!2.02e-40!69;UBERON:0006238!2.02e-40!69;UBERON:0002616!3.71e-38!59;UBERON:0002780!2.11e-34!41;UBERON:0001890!2.11e-34!41;UBERON:0006240!2.11e-34!41;UBERON:0003075!1.88e-33!86;UBERON:0007284!1.88e-33!86;UBERON:0003080!3.87e-33!42;UBERON:0002346!9.35e-33!90;UBERON:0001893!4.48e-28!34;UBERON:0002020!5.64e-28!34;UBERON:0003528!5.64e-28!34;UBERON:0002791!3.87e-27!33;UBERON:0001869!4.41e-26!32;UBERON:0004121!8.04e-26!169;UBERON:0000924!9.09e-26!173;UBERON:0006601!9.09e-26!173;UBERON:0000153!1.01e-25!129;UBERON:0007811!1.01e-25!129;UBERON:0003056!1.51e-25!61;UBERON:0000033!1.64e-24!123;UBERON:0002619!9.42e-21!22;UBERON:0000956!6.77e-20!25;UBERON:0000203!6.77e-20!25;UBERON:0001950!4.13e-19!20;UBERON:0003076!5.82e-10!15;UBERON:0003057!5.82e-10!15;UBERON:0002308!1.47e-09!9;UBERON:0000125!1.47e-09!9;UBERON:0002420!2.21e-09!9;UBERON:0007245!2.21e-09!9;UBERON:0010009!2.21e-09!9;UBERON:0010011!2.21e-09!9;UBERON:0000454!2.21e-09!9;UBERON:0004732!2.28e-08!13;UBERON:0001871!5.77e-08!7;UBERON:0009663!9.17e-08!7;UBERON:0001894!1.05e-07!7;UBERON:0006222!1.05e-07!7;UBERON:0004733!1.72e-07!12;UBERON:0002028!1.72e-07!12;UBERON:0007277!1.72e-07!12;UBERON:0000200!6.20e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.43e-41;41!UBERON:0001890;1.43e-41;41!UBERON:0001893;2.91e-39;34!UBERON:0003528;6.01e-39;34!UBERON:0002020;6.01e-39;34!UBERON:0000073;1.04e-38;53!UBERON:0002616;1.04e-38;53!UBERON:0002791;1.92e-38;32!UBERON:0001869;2.14e-38;32!UBERON:0002619;9.35e-37;22!UBERON:0001950;9.99e-34;20!UBERON:0000956;1.33e-31;25!UBERON:0000203;1.33e-31;25!UBERON:0000955;1.75e-26;68!UBERON:0001017;3.22e-26;75!UBERON:0001016;8.14e-25;83!UBERON:0000125;3.44e-16;9!UBERON:0002308;3.44e-16;9!UBERON:0002420;7.35e-16;9!UBERON:0007245;7.35e-16;9!UBERON:0010009;7.35e-16;9!UBERON:0010011;7.35e-16;9!UBERON:0000454;7.35e-16;9!UBERON:0007023;1.05e-15;114!UBERON:0004732;1.54e-13;13!UBERON:0009663;6.66e-13;7!UBERON:0001894;8.74e-13;7!UBERON:0004733;5.94e-12;12!UBERON:0002028;5.94e-12;12!UBERON:0001871;1.07e-11;6!UBERON:0002298;1.23e-11;6!UBERON:0000200;2.18e-11;6!UBERON:0011216;1.10e-09;132!UBERON:0001872;1.47e-09;5!UBERON:0000349;2.84e-09;5!UBERON:0002021;3.68e-09;5!UBERON:0002784;1.79e-08;4!UBERON:0000369;9.01e-08;4!UBERON:0002435;9.01e-08;4!UBERON:0000204;9.01e-08;4!UBERON:0002680;1.57e-07;9!UBERON:0001895;1.57e-07;9!UBERON:0003296;1.82e-07;4!UBERON:0010133;1.82e-07;4!UBERON:0010314;4.12e-07;132!UBERON:0000988;9.75e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.43e-74,56;UBERON:0005068,6.43e-74,56;UBERON:0006241,6.43e-74,56;UBERON:0007135,6.43e-74,56;UBERON:0000073,7.13e-69,53;UBERON:0002616,7.13e-69,53;UBERON:0001016,1.18e-65,89;UBERON:0001017,1.16e-64,81;UBERON:0000955,5.08e-59,68;UBERON:0006238,5.08e-59,68;UBERON:0007023,1.96e-58,114;UBERON:0002780,4.94e-58,41;UBERON:0001890,4.94e-58,41;UBERON:0003080,4.94e-58,41;UBERON:0006240,4.94e-58,41;UBERON:0003075,1.07e-55,82;UBERON:0007284,1.07e-55,82;UBERON:0002346,2.88e-52,86;UBERON:0001893,1.83e-46,34;UBERON:0003528,2.77e-46,34;UBERON:0002020,2.77e-46,34;UBERON:0002791,6.25e-43,32;UBERON:0001869,7.77e-43,32;UBERON:0010371,8.12e-42,104;UBERON:0003056,2.76e-41,61;UBERON:0002619,9.88e-37,22;UBERON:0010314,7.94e-36,132;UBERON:0001950,1.04e-33,20;UBERON:0004121,6.76e-32,171;UBERON:0000924,6.76e-32,171;UBERON:0006601,6.76e-32,171;UBERON:0000956,1.39e-31,25;UBERON:0000203,1.39e-31,25;UBERON:0011216,1.31e-25,223;UBERON:0000025,1.49e-17,192;UBERON:0003076,2.03e-16,15;UBERON:0003057,2.03e-16,15;UBERON:0000125,3.46e-16,9;UBERON:0002308,3.46e-16,9;UBERON:0002420,7.32e-16,9;UBERON:0007245,7.32e-16,9;UBERON:0010009,7.32e-16,9;UBERON:0010011,7.32e-16,9;UBERON:0000454,7.32e-16,9;UBERON:0004732,1.59e-13,13;UBERON:0004111,3.53e-13,240;UBERON:0009663,6.57e-13,7;UBERON:0001894,8.40e-13,7;UBERON:0006222,8.40e-13,7;UBERON:0004733,6.15e-12,12;UBERON:0002028,6.15e-12,12;UBERON:0007277,6.15e-12,12;UBERON:0001871,1.18e-11,6;UBERON:0002298,1.27e-11,6;UBERON:0000200,2.13e-11,6;UBERON:0000483,1.12e-09,306;UBERON:0001872,1.28e-09,5;UBERON:0000119,2.05e-09,309;UBERON:0000349,2.90e-09,5;UBERON:0002021,4.08e-09,5;UBERON:0002784,1.74e-08,4;UBERON:0000923,2.05e-08,560;UBERON:0010316,2.05e-08,560;UBERON:0005291,2.05e-08,560;UBERON:0006598,2.05e-08,560;UBERON:0010317,2.05e-08,560;UBERON:0002532,2.05e-08,560;UBERON:0002050,3.57e-08,564;UBERON:0000369,9.11e-08,4;UBERON:0002435,9.11e-08,4;UBERON:0000204,9.11e-08,4;UBERON:0010082,9.11e-08,4;UBERON:0002680,1.61e-07,9;UBERON:0001895,1.61e-07,9;UBERON:0010092,1.61e-07,9;UBERON:0003296,1.75e-07,4;UBERON:0010133,1.75e-07,4;UBERON:0000922,1.82e-07,592;UBERON:0005423,3.40e-07,581;UBERON:0000988,9.95e-07,3 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0.123121058076788,0,0,0.85870796139317,0,0.125542639594803,0,0,0.0787107813136792,0,0.383829398097213,0.309632246632152,0,0,0,0,0,0,0.553995408531877,0.401088894940283,0.434021741431704,1.79132379391939,2.59114932815184,1.03030227053675,0,0.377875943688809,0,0,0,0,0,0.256160706529101,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0.150176892841506,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0.95569624297229,0,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0.434473211648397,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0.221729397462564,0.087834785693126,3.01251873644739,0,0,0.324547393654683,0.870648686496336,0.26591592103773,3.57735936458013,2.28797964312051,2.97166001063652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0.570471821544449,0,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0.113432183160021,0,0,0,0,0.103052529238439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0.234817388471643,0,0,0,0,0,1.23108503043699,0.234004265139238,0.594524649154913,0,0,0,0,0,0,3.4486426652716,4.22632483263485,9.74442143041629,12.6825559006926,7.82703087243556,0.507983154337352,0,2.34434894420094,1.71072446022705,0.205654985406647,0.300343057843917,2.28661146104463,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0.710783897485092,0,0,0,0,0,1.00451418286425,2.10833939483032,0.239624855491583,0,0,0,0,0,0,1.37921532141349,0.215627574859517,0.256686072559497,1.01637849688985,2.60279707715243,0.773288812777695,2.68026024534958,1.27587750330633,0,0,0,0.12269149171914,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0.206768026122887,0,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,1.03850885836724,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.618246069886334,0,0,0,0,0,0.290012154876366,0.154048617114644,0,0,0.859361958946189,0.145016693914229,0,1.33548053470106,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.190630193923825,0,0,0,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0.213648142254946,0,0,0,0.144269212976445,0,0,0,0,0,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0.33307196799782,0,0,1.02555725490326,0,0,0,0,0,0,8.94732882989668,13.6449333918197,0,0,0,0.796991953004279,1.10513566212459,1.25966373927138,0,0,0,0,0,0,0.690503839458535,0,0,9.69332746095218,21.3366625772258,9.98068990005971,0,0,0,0,0,0,0,0.291604613383254,0.868124974666461,10.6288966297661,11.0948723535375,25.9388951739042,40.361429874897,15.3684761855845,4.60709334023342,0,0,1.53900517007594,0,0,0,0,0,0.0915975934018623,0,1.02193298195737,0.156980256395025,0.332423363800313,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0,0,0,0.432777279484182,0,0.884575645033392,0,0,0,0,44.9565556981116,3.21031058919516,27.1746757041393,0.182454789215666,0,0,0.394584402849391,1.20990716048664,5.50930970934882,0.821425535170343,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.775912131907355,0,7.23138370497704,0.137041924646751,0,21.4623598290429,0,0,0.85381197895741,0,0,0,0,0,0.248505071130865,0,0.135904206073614,0.209205692624666,0.101998217636322,0.866851769704557,15.6109275064545,30.9406156295904,0,0,0,1.95497680890578,2.7499250881402,0,0,1.71690419254628,1.78537165953498,3.69509098676994,0,0,0,0,0,0,0,7.15706720828373,14.1651542356039,0,0.275078873194468,0,0,0,16.4023802976667,0,0.472834243795189,0.734364233889974,0,0,0,2.1440859791201,1.32418394073086,0,0.542999601753713,0,0,0,0,0,0,0.146552233678082,0,15.3846718070245,22.611774898,0.342173675768659,0,1.06787412567695,4.71612915298998,0,0,0,3.0448149595224,0,1.08803560673895,2.2562090462043,0.612691153526923,1.63936315354902,0,16.8352954193727,12.0806002252944,16.9007756453775,10.3213655224213,19.6344421220229,26.7014532647949,0.138348634936231,0,0.454947352624943,0.856396000634902,0,0,0.434763085832475,0,0.233713309847224,0.554805861502613,0,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2179226250906,0,0,0.163565394255844,0,0,0,0,0,0,0,0,0,0.622077260032973,3.58104239650225,5.28341575843741,0,4.91443371864063,0,0.425149840203366,0.247871528518004,0,0,0.552032215008773,3.20228299314188,0,0,20.6175812559635,15.5866233958143,19.4753308049725,10.4609345762785,2.26864526599546,16.182797076627,14.2098568156029,22.8431072414647,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,20.4638881393736,17.1837181695046,16.7416305165959,21.4979596557344,3.82882366312754,0.548257766857182,2.97726707033577,0,0,12.8568440610789,23.8761442775365,2.42786241694653,6.82986574053893,0.0887023701626388,0,0,37.9950807340489,19.6660592952919,0,0,2.04082041411336,9.26981980504411,0,2.73947616152849,0,0,6.14698279919245,1.42212250559454,0.23248285073625,0,0,0,0,0,0.430227358820278,0.236664001461131,0.0852134047591577,2.11693525095465,0,0,0,0,0,0,0,2.97722139883116,0,3.39997695141398,0,3.18321240258189,0.594600453887843,0,0.659643100472575,0.603851374266694,0.771741581079447,0.874238242015829,0,1.47088993052343,0.235676547101626,14.1342096322761,25.2489440278023,9.2984260068348,0,0.751871343838829,0.773494655682926,0,0,0,0,0,0.458729283404541,32.9681041248338,0.473314686579554,13.8702639989466,2.18175345170189,2.1161073620616,0,0,0,0,0,0.126698501011437,0,0,0,0,0.378893491091197,0,27.3625915021397,42.407528303377,2.55880778281177,1.66645102024618,0.710478008196067,1.24149428591716,0,0,0.606351566874658,2.61260097476354,3.08009970976753,0.5388164241167,0.358611026963382,0.99798106963804,0,0.213454691755431,0,0.179650404213174,2.34640942403454,1.95586310692586,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p4@CLASP2 | |||
}} |
Latest revision as of 00:24, 18 September 2015
Short description: | p4@CLASP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CLASP2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 21bp_to_ENST00000461133_5end |
EntrezGene: | CLASP2 |
HGNC: | 17078 |
UniProt: | E3W994 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 9.78e-09 | 5 |
basophil mast progenitor cell | 9.78e-09 | 5 |