FFCP PHASE1:Hg19::chr5:14441222..14441241,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12303 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=294bp_to_ENST00000515710,uc003jfi.1_5end | |||
|cluster_id=chr5:14441222..14441241,+ | |||
|coexpression_cluster_id=C950 | |||
|description=CAGE_peak_4_at_TRIO_5end | |||
|id=chr5:14441222..14441241,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.82e-19!180;CL:0000680!4.49e-15!57;CL:0000056!4.49e-15!57;CL:0000355!4.49e-15!57;CL:0000183!7.67e-15!59;CL:0000057!1.50e-13!75;CL:0000187!2.51e-13!54;CL:0000393!5.76e-12!60;CL:0000211!5.76e-12!60;CL:0000192!1.95e-10!42;CL:0000514!1.95e-10!42;CL:0000359!5.56e-09!32;CL:0002620!1.21e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.95e-08;32!CL:0000188;1.90e-07;9!CL:0002334;2.14e-07;12!CL:0000680;6.76e-07;7!CL:0000187;7.36e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,1.28e-13,58;CL:0000056,1.28e-13,58;CL:0000355,1.28e-13,58;CL:0000187,1.46e-11,55;CL:0000393,5.89e-11,61;CL:0000211,5.89e-11,61;CL:0000057,9.41e-10,76;CL:0000359,1.70e-08,32;CL:0000192,3.46e-08,43;CL:0000514,3.46e-08,43;CL:0002334,1.74e-07,12;CL:0000188,2.50e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000355;4.11e-08;58 | |||
|ontology_enrichment_disease=DOID:2394!8.06e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.05e-23!365;UBERON:0000073!4.77e-20!94;UBERON:0001016!4.77e-20!94;UBERON:0005743!2.24e-19!86;UBERON:0004290!5.18e-19!70;UBERON:0001017!5.29e-19!82;UBERON:0002616!1.86e-18!59;UBERON:0000119!4.14e-18!312;UBERON:0000955!1.09e-17!69;UBERON:0006238!1.09e-17!69;UBERON:0003075!4.94e-17!86;UBERON:0007284!4.94e-17!86;UBERON:0000483!7.07e-17!309;UBERON:0000914!1.29e-16!83;UBERON:0002329!1.29e-16!83;UBERON:0003077!1.29e-16!83;UBERON:0003059!1.29e-16!83;UBERON:0007282!1.29e-16!83;UBERON:0009618!1.29e-16!83;UBERON:0007285!1.29e-16!83;UBERON:0001049!1.38e-16!57;UBERON:0005068!1.38e-16!57;UBERON:0006241!1.38e-16!57;UBERON:0007135!1.38e-16!57;UBERON:0002385!1.92e-16!63;UBERON:0001015!1.92e-16!63;UBERON:0000383!1.92e-16!63;UBERON:0001134!2.80e-16!61;UBERON:0002036!2.80e-16!61;UBERON:0003082!2.80e-16!61;UBERON:0002346!4.21e-16!90;UBERON:0002619!7.07e-16!22;UBERON:0002780!7.40e-16!41;UBERON:0001890!7.40e-16!41;UBERON:0006240!7.40e-16!41;UBERON:0001893!1.98e-15!34;UBERON:0000956!2.72e-15!25;UBERON:0000203!2.72e-15!25;UBERON:0003080!4.24e-15!42;UBERON:0001950!7.28e-15!20;UBERON:0002791!7.86e-15!33;UBERON:0001869!8.18e-15!32;UBERON:0002020!1.63e-14!34;UBERON:0003528!1.63e-14!34;UBERON:0000486!2.02e-14!82;UBERON:0007023!2.19e-14!115;UBERON:0000153!2.29e-14!129;UBERON:0007811!2.29e-14!129;UBERON:0000033!4.25e-14!123;UBERON:0000481!4.40e-14!347;UBERON:0003056!5.00e-14!61;UBERON:0004121!5.50e-13!169;UBERON:0000468!9.20e-13!659;UBERON:0000025!1.39e-12!194;UBERON:0000924!1.43e-12!173;UBERON:0006601!1.43e-12!173;UBERON:0000467!8.11e-11!625;UBERON:0000477!8.30e-11!286;UBERON:0000480!1.15e-10!626;UBERON:0000479!1.75e-10!787;UBERON:0004111!3.62e-09!241;UBERON:0004573!4.48e-09!33;UBERON:0004571!4.48e-09!33;UBERON:0002049!2.62e-08!79;UBERON:0007798!2.62e-08!79;UBERON:0002050!2.93e-08!605;UBERON:0005423!2.93e-08!605;UBERON:0004872!3.54e-08!84;UBERON:0000923!4.22e-08!604;UBERON:0005291!4.22e-08!604;UBERON:0006598!4.22e-08!604;UBERON:0002532!4.22e-08!604;UBERON:0000922!4.65e-08!612;UBERON:0001637!7.84e-08!42;UBERON:0003509!7.84e-08!42;UBERON:0004572!7.84e-08!42;UBERON:0005256!9.22e-08!143;UBERON:0001135!8.90e-07!15;UBERON:0001013!9.97e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.02e-21;22!UBERON:0001950;4.84e-20;20!UBERON:0000956;6.67e-18;25!UBERON:0000203;6.67e-18;25!UBERON:0001869;1.58e-14;32!UBERON:0001893;4.07e-14;34!UBERON:0002385;7.20e-14;31!UBERON:0001015;7.20e-14;31!UBERON:0000383;7.20e-14;31!UBERON:0002791;3.15e-13;32!UBERON:0003528;5.20e-12;34!UBERON:0002020;5.20e-12;34!UBERON:0002780;2.76e-11;41!UBERON:0001890;2.76e-11;41!UBERON:0001134;1.02e-10;16!UBERON:0002036;1.02e-10;16!UBERON:0001017;1.36e-09;75!UBERON:0000073;1.47e-08;53!UBERON:0002616;1.47e-08;53!UBERON:0004573;8.25e-08;33!UBERON:0004571;8.25e-08;33!UBERON:0001013;8.81e-08;14!UBERON:0000955;9.15e-08;68!UBERON:0001016;1.39e-07;83!UBERON:0001871;1.48e-07;6!UBERON:0000200;4.15e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.37e-21,22;UBERON:0001950,5.99e-20,20;UBERON:0001017,2.19e-19,81;UBERON:0001016,6.75e-19,89;UBERON:0007524,1.40e-18,73;UBERON:0003077,2.89e-18,72;UBERON:0007285,2.89e-18,72;UBERON:0000956,7.66e-18,25;UBERON:0000203,7.66e-18,25;UBERON:0002329,1.36e-17,71;UBERON:0003059,1.36e-17,71;UBERON:0007282,1.36e-17,71;UBERON:0004290,1.36e-17,71;UBERON:0009618,1.36e-17,71;UBERON:0000955,2.28e-17,68;UBERON:0006238,2.28e-17,68;UBERON:0010314,3.52e-17,132;UBERON:0001869,3.43e-16,32;UBERON:0001893,4.66e-16,34;UBERON:0002780,1.40e-15,41;UBERON:0001890,1.40e-15,41;UBERON:0003080,1.40e-15,41;UBERON:0006240,1.40e-15,41;UBERON:0002791,1.17e-14,32;UBERON:0007503,1.23e-14,78;UBERON:0001134,1.48e-14,62;UBERON:0002036,1.48e-14,62;UBERON:0003082,1.48e-14,62;UBERON:0000486,1.88e-14,83;UBERON:0001049,2.58e-14,56;UBERON:0005068,2.58e-14,56;UBERON:0006241,2.58e-14,56;UBERON:0007135,2.58e-14,56;UBERON:0003075,3.87e-14,82;UBERON:0007284,3.87e-14,82;UBERON:0000119,4.83e-14,309;UBERON:0000073,5.54e-14,53;UBERON:0002616,5.54e-14,53;UBERON:0002385,1.07e-13,64;UBERON:0001015,1.07e-13,64;UBERON:0000383,1.07e-13,64;UBERON:0003528,2.64e-13,34;UBERON:0002020,2.64e-13,34;UBERON:0002346,8.45e-13,86;UBERON:0000483,9.10e-13,306;UBERON:0003056,1.36e-12,61;UBERON:0010371,1.58e-10,104;UBERON:0000479,5.53e-10,773;UBERON:0000025,2.29e-09,192;UBERON:0004121,2.39e-09,171;UBERON:0000924,2.39e-09,171;UBERON:0006601,2.39e-09,171;UBERON:0004573,1.55e-08,33;UBERON:0004571,1.55e-08,33;UBERON:0002049,6.32e-08,78;UBERON:0007798,6.32e-08,78;UBERON:0001013,6.85e-08,14;UBERON:0001637,1.33e-07,42;UBERON:0003509,1.33e-07,42;UBERON:0004572,1.33e-07,42;UBERON:0001871,1.55e-07,6;UBERON:0005256,1.97e-07,122;UBERON:0000923,2.66e-07,560;UBERON:0010316,2.66e-07,560;UBERON:0005291,2.66e-07,560;UBERON:0006598,2.66e-07,560;UBERON:0010317,2.66e-07,560;UBERON:0002532,2.66e-07,560;UBERON:0000200,4.43e-07,6;UBERON:0002050,5.69e-07,564;UBERON:0007023,5.88e-07,114;UBERON:0004535,9.45e-07,109;UBERON:0004872,9.97e-07,83 | |||
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| |||
|short_description=p4@TRIO | |||
}} |
Latest revision as of 19:26, 15 September 2015
Short description: | p4@TRIO |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIO_5end |
Coexpression cluster: | C950_liposarcoma_extraskeletal_Fibroblast_Smooth_Preadipocyte_neuroblastoma_mesenchymal |
Association with transcript: | 294bp_to_ENST00000515710, uc003jfi.1_5end |
EntrezGene: | TRIO |
HGNC: | 12303 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 1.28e-13 | 58 |
myoblast | 1.28e-13 | 58 |
multi-potent skeletal muscle stem cell | 1.28e-13 | 58 |
muscle cell | 1.46e-11 | 55 |
electrically responsive cell | 5.89e-11 | 61 |
electrically active cell | 5.89e-11 | 61 |
fibroblast | 9.41e-10 | 76 |
vascular associated smooth muscle cell | 1.70e-08 | 32 |
smooth muscle cell | 3.46e-08 | 43 |
smooth muscle myoblast | 3.46e-08 | 43 |
preadipocyte | 1.74e-07 | 12 |
cell of skeletal muscle | 2.50e-07 | 9 |