FFCP PHASE1:Hg19::chrX:20236970..20237027,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6197 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10432 | |||
|TSSclassifier=strong | |||
|UniProt=F5GYC4 | |||
|association_with_transcript=0bp_to_ENST00000379548,ENST00000474266,uc011mjk.1_5end | |||
|cluster_id=chrX:20236970..20237027,- | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_4_at_RPS6KA3_5end | |||
|id=chrX:20236970..20237027,- | |||
|ontology_enrichment_celltype=CL:0002139!1.94e-23!24;CL:0000115!9.35e-18!35;CL:0000071!1.29e-17!18;CL:0002546!1.29e-17!18;CL:0002078!1.11e-11!44;CL:1000413!1.71e-09!9;CL:0005020!2.21e-07!6;CL:0002138!2.21e-07!6;CL:0005022!2.21e-07!6;CL:0002543!6.01e-07!6;CL:0002544!8.51e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.01e-33;24!CL:0000071;3.82e-25;18!CL:0000115;6.90e-23;36!CL:0002078;2.75e-13;45!CL:1000413;3.41e-13;9!CL:0002138;4.13e-10;6!CL:0002543;1.77e-09;6!CL:0002544;2.92e-09;6!CL:0000213;1.32e-08;58!CL:0000215;1.32e-08;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.03e-33,24;CL:0000115,4.62e-27,36;CL:0000071,3.88e-25,18;CL:0002546,3.88e-25,18;CL:0002078,1.45e-19,45;CL:1000413,3.35e-13,9;CL:0000213,5.32e-13,58;CL:0000215,5.32e-13,58;CL:0005020,4.13e-10,6;CL:0002138,4.13e-10,6;CL:0005022,4.13e-10,6;CL:0002543,1.78e-09,6;CL:0002544,2.96e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.82e-25;18!CL:0005022;4.13e-10;6!UBERON:0004872;6.51e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.70e-49!115;UBERON:0004111!9.90e-31!241;UBERON:0000025!1.85e-27!194;UBERON:0000477!3.22e-27!286;UBERON:0001049!6.02e-24!57;UBERON:0005068!6.02e-24!57;UBERON:0006241!6.02e-24!57;UBERON:0007135!6.02e-24!57;UBERON:0002616!1.07e-20!59;UBERON:0003080!2.69e-19!42;UBERON:0003075!1.50e-18!86;UBERON:0007284!1.50e-18!86;UBERON:0002780!1.89e-18!41;UBERON:0001890!1.89e-18!41;UBERON:0006240!1.89e-18!41;UBERON:0002346!1.26e-17!90;UBERON:0001986!1.29e-17!18;UBERON:0004638!1.29e-17!18;UBERON:0004852!1.29e-17!18;UBERON:0000483!3.79e-17!309;UBERON:0000119!6.25e-17!312;UBERON:0000955!1.57e-16!69;UBERON:0006238!1.57e-16!69;UBERON:0001017!3.94e-16!82;UBERON:0002020!1.81e-15!34;UBERON:0003528!1.81e-15!34;UBERON:0005743!2.39e-15!86;UBERON:0000487!3.24e-15!22;UBERON:0001893!4.80e-15!34;UBERON:0002791!1.37e-14!33;UBERON:0001869!6.23e-14!32;UBERON:0000073!2.27e-13!94;UBERON:0001016!2.27e-13!94;UBERON:0002619!1.07e-12!22;UBERON:0003056!2.25e-12!61;UBERON:0006914!2.31e-12!25;UBERON:0001950!1.42e-11!20;UBERON:0004872!1.53e-11!84;UBERON:0000467!5.69e-11!625;UBERON:0000480!7.50e-11!626;UBERON:0000956!2.50e-10!25;UBERON:0000203!2.50e-10!25;UBERON:0000055!3.19e-10!69;UBERON:0000468!3.31e-10!659;UBERON:0000153!4.89e-10!129;UBERON:0007811!4.89e-10!129;UBERON:0001009!5.34e-10!113;UBERON:0003914!8.86e-10!118;UBERON:0002049!1.05e-09!79;UBERON:0007798!1.05e-09!79;UBERON:0003915!1.71e-09!9;UBERON:0004700!1.71e-09!9;UBERON:0001917!1.71e-09!9;UBERON:0000033!3.12e-09!123;UBERON:0004535!6.36e-09!110;UBERON:0000481!1.73e-08!347;UBERON:0000922!2.02e-08!612;UBERON:0002050!2.03e-08!605;UBERON:0005423!2.03e-08!605;UBERON:0007100!3.64e-08!27;UBERON:0000923!3.80e-08!604;UBERON:0005291!3.80e-08!604;UBERON:0006598!3.80e-08!604;UBERON:0002532!3.80e-08!604;UBERON:0003103!5.91e-08!69;UBERON:0001981!9.33e-08!60;UBERON:0007500!9.33e-08!60;UBERON:0004537!9.33e-08!60;UBERON:0006965!9.33e-08!60;UBERON:0002298!5.56e-07!8;UBERON:0002308!7.35e-07!9;UBERON:0000125!7.35e-07!9;UBERON:0002420!9.38e-07!9;UBERON:0007245!9.38e-07!9;UBERON:0010009!9.38e-07!9;UBERON:0010011!9.38e-07!9;UBERON:0000454!9.38e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.82e-25;18!UBERON:0001986;3.82e-25;18!UBERON:0004852;3.82e-25;18!UBERON:0000487;2.35e-19;22!UBERON:0006914;2.97e-16;25!UBERON:0003915;3.41e-13;9!UBERON:0004700;3.41e-13;9!UBERON:0001917;3.41e-13;9!UBERON:0007023;8.01e-13;114!UBERON:0003528;2.28e-11;34!UBERON:0002020;2.28e-11;34!UBERON:0000073;1.48e-10;53!UBERON:0002616;1.48e-10;53!UBERON:0002791;1.58e-10;32!UBERON:0001869;2.67e-10;32!UBERON:0002780;3.49e-10;41!UBERON:0001890;3.49e-10;41!UBERON:0000490;4.71e-10;33!UBERON:0001893;5.06e-10;34!UBERON:0002619;2.24e-09;22!UBERON:0001950;5.09e-09;20!UBERON:0000956;7.96e-08;25!UBERON:0000203;7.96e-08;25!UBERON:0000125;1.02e-07;9!UBERON:0002308;1.02e-07;9!UBERON:0001638;1.25e-07;9!UBERON:0003920;1.25e-07;9!UBERON:0004582;1.25e-07;9!UBERON:0002420;1.38e-07;9!UBERON:0007245;1.38e-07;9!UBERON:0010009;1.38e-07;9!UBERON:0010011;1.38e-07;9!UBERON:0000454;1.38e-07;9!UBERON:0000055;1.74e-07;65!UBERON:0001473;3.11e-07;8!UBERON:0004536;3.11e-07;8!UBERON:0006558;3.11e-07;8!UBERON:0002465;3.45e-07;10!UBERON:0002298;7.78e-07;6!UBERON:0007100;8.12e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.48e-51,114;UBERON:0004111,3.08e-27,240;UBERON:0000025,3.36e-26,192;UBERON:0004638,3.88e-25,18;UBERON:0001986,3.88e-25,18;UBERON:0004852,3.88e-25,18;UBERON:0000487,2.38e-19,22;UBERON:0001049,2.18e-18,56;UBERON:0005068,2.18e-18,56;UBERON:0006241,2.18e-18,56;UBERON:0007135,2.18e-18,56;UBERON:0000073,3.93e-17,53;UBERON:0002616,3.93e-17,53;UBERON:0006914,2.99e-16,25;UBERON:0010314,3.22e-14,132;UBERON:0000055,1.57e-13,68;UBERON:0003528,2.86e-13,34;UBERON:0002020,2.86e-13,34;UBERON:0003915,3.35e-13,9;UBERON:0004700,3.35e-13,9;UBERON:0001917,3.35e-13,9;UBERON:0000483,3.87e-13,306;UBERON:0002780,3.95e-13,41;UBERON:0001890,3.95e-13,41;UBERON:0003080,3.95e-13,41;UBERON:0006240,3.95e-13,41;UBERON:0003075,5.48e-13,82;UBERON:0007284,5.48e-13,82;UBERON:0000119,9.04e-13,309;UBERON:0004872,9.30e-13,83;UBERON:0002346,1.34e-12,86;UBERON:0000955,8.51e-12,68;UBERON:0006238,8.51e-12,68;UBERON:0001017,9.45e-12,81;UBERON:0001893,1.01e-11,34;UBERON:0002791,1.17e-11,32;UBERON:0001869,2.27e-11,32;UBERON:0001009,5.48e-11,112;UBERON:0003914,6.92e-11,117;UBERON:0002049,1.68e-10,78;UBERON:0007798,1.68e-10,78;UBERON:0007500,1.30e-09,59;UBERON:0001981,1.30e-09,59;UBERON:0004537,1.30e-09,59;UBERON:0006965,1.30e-09,59;UBERON:0004535,1.40e-09,109;UBERON:0001016,1.42e-09,89;UBERON:0002619,2.19e-09,22;UBERON:0010371,2.94e-09,104;UBERON:0001950,4.96e-09,20;UBERON:0011216,3.27e-08,223;UBERON:0000956,7.82e-08,25;UBERON:0000203,7.82e-08,25;UBERON:0000125,1.16e-07,9;UBERON:0002308,1.16e-07,9;UBERON:0001638,1.32e-07,9;UBERON:0003920,1.32e-07,9;UBERON:0004582,1.32e-07,9;UBERON:0002420,1.59e-07,9;UBERON:0007245,1.59e-07,9;UBERON:0010009,1.59e-07,9;UBERON:0010011,1.59e-07,9;UBERON:0000454,1.59e-07,9;UBERON:0003056,2.70e-07,61;UBERON:0001473,3.11e-07,8;UBERON:0004536,3.11e-07,8;UBERON:0006558,3.11e-07,8;UBERON:0002465,3.46e-07,10;UBERON:0002298,4.54e-07,6;UBERON:0003103,4.75e-07,68;UBERON:0002050,9.00e-07,564 | |||
|phase1_expression=0.54503513781167,0,0.563817616383885,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0.217010870715852,0.223915474239924,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,2.68280343881454,1.2786256184353,0,0,0,0,0,0.283604451492204,0.221729397462564,0.087834785693126,1.17881167947941,0,0,0,0.174129737299267,0.132957960518865,0.238490624305342,0.571994910780128,0,16.0997549967031,7.74211135595512,10.7613555498354,6.21838736116411,13.423981958717,15.9568464325239,8.98678356108286,71.5814422899041,76.8455127403294,75.9815790975801,15.7103433672567,15.2054421143703,16.1080957981792,23.8981002224815,7.29127753093584,50.6329459370732,18.1868791827198,12.2746513726821,7.66583187329416,8.54339093611316,8.24407847686833,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0.622422070799533,3.77189881795127,1.9615428373615,0.302714855289863,0.576175924479999,0,0,2.85235910772225,0,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0,0,0,0,0.907457465280168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.42893272774789,0,0,0,7.60530208930985,0.982827216677626,9.45263850690247,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,20.9331349253557,11.5746378144153,31.3919351187087,0,0,2.21595305478658,0.468008530278475,0.297262324577456,0,1.17587489739202,1.27597587518148,0,0,0.383382679165211,13.7945706610864,0.352193736052904,0.829312462163088,1.15295962733569,0.12624243342638,0.190493682876507,0.763976851116555,0,0,0.308482478109971,2.70308752059526,2.28661146104463,0,0,0.07333828582095,0,0,0.845302752556,0,0,0,0,0,0.142977993658148,0,0,2.60588947434988,0,0,0,0,0,0,0,0,0,0,0,0.579125226670317,0,1.43248770591916,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0.574072240823034,0,0.131124414959424,0,0,0,0,0,0,6.29346709523108,12.7390390500262,1.54227252690289,0,0,0,0,0,0,0,0,0,0,21.6386124460217,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0,0,0,0,0.924100740528266,0.532306030317022,0,0.37064843820784,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,2.19342140668156,0,0.272999822815972,0.565621727814851,0,0,1.32687795048244,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,23.9125253973019,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.0711418433484141,0,0,0.383010740264733,4.65681881992542,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0.99921590399346,0,0,17.5809815126273,0,0,0,0,0,0,1.9882952955326,4.07941307590487,0,0,0.211125408127993,3.18796781201712,3.31540698637377,0,0,0,0,0,0,0,7.10232520585922,0,0,0.969332746095218,2.04089815956073,0,0,0,15.9499906595655,0,0.254253650292766,0,0,0,0,2.65722415744152,4.70326110639091,1.52581736317083,5.63954225649246,0.295547618953547,1.31631238292384,0,0,5.46346835376959,0,0,0,0,0.638002319463839,0,1.06606955203727,0,1.41282230755522,0,0,0,0,0,0,0,0,0,0,0,2.4768118060935,2.4441205797345,0,0,0,0.943615861729479,5.61804353109152,0.468528891450678,0,0.19566461893209,0,1.57833761139756,1.20990716048664,0.61214552326098,10.5521587979575,0.150323419414493,0,0,0,0,0,0.569219092059585,0,0,0,0,2.79562669187248,0,0,0,0,4.17052770900203,0,0.90392296312213,0.137041924646751,0.19871461170299,1.39283751102933,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,1.20084057741958,5.33930977678773,0,0,0,12.5677080572514,6.87481272035051,13.6395874669595,1.39775300349294,2.57535628881943,4.01708623395371,6.85271419364608,0,0,0,0,0,3.6418168160457,0,0.795229689809303,7.49118733613666,0,0,0,0,0,1.27574068981852,0,2.28536551167675,1.36381929150995,0,0.179287339332845,0,8.5763439164804,3.31045985182716,0,0,0,0,0,0.082092520749339,0,0,4.39656701034247,2.65013777824443,1.68067843270016,7.53725829933333,1.53978154095896,0,9.61086713109252,12.1047314926743,2.89967338743037,3.47316215268366,0,0,0,1.63205341010842,6.0165574565448,4.28883807468846,2.95085367638824,0,2.65820453990096,2.68457782784319,7.13588305027049,4.58727356552057,4.43716206147409,1.4903136705932,0,0,1.66814029295813,0,0,0,0,0,0,0,0,0,0,0,0.453692771289717,0,0.443565449968902,0,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.83904526531058,0,0.132864840313363,0,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,1.23935764259002,0,0,0,0,0,0,1.09189682663981,1.41696576325585,7.98169295285756,0.82046545696302,0.252071696221718,0.207471757392654,1.77623210195036,0,0,0,0,0,0,0,0,2.632361492224,0,1.56302802246618,0,0,0.887136517302272,1.35075169236789,1.56215619722769,7.02735108104026,1.07806877329642,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| |||
|short_description=p4@RPS6KA3 | |||
}} |
Latest revision as of 16:16, 24 September 2015
Short description: | p4@RPS6KA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_RPS6KA3_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | 0bp_to_ENST00000379548, ENST00000474266, uc011mjk.1_5end |
EntrezGene: | RPS6KA3 |
HGNC: | 10432 |
UniProt: | F5GYC4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.03e-33 | 24 |
endothelial cell | 4.62e-27 | 36 |
blood vessel endothelial cell | 3.88e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 3.88e-25 | 18 |
meso-epithelial cell | 1.45e-19 | 45 |
endothelial cell of artery | 3.35e-13 | 9 |
lining cell | 5.32e-13 | 58 |
barrier cell | 5.32e-13 | 58 |
lymphangioblast | 4.13e-10 | 6 |
endothelial cell of lymphatic vessel | 4.13e-10 | 6 |
vascular lymphangioblast | 4.13e-10 | 6 |
vein endothelial cell | 1.78e-09 | 6 |
aortic endothelial cell | 2.96e-09 | 6 |