Personal tools

FFCP PHASE1:Mm9::chr9:86775533..86775547,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
(Created page with "{{FFCP |id=chr9:86775533..86775547,- |short_description=p4@Snap91 |description=CAGE_peak_4_at_Snap91_5end |association_with_transcript=-44bp_to_ENSMUST00000167014,uc009qxz...")
 
No edit summary
 
(8 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr9:86775533..86775547,-
|DHSsupport=NA
|short_description=p4@Snap91
|DPIdataset=NA
|description=CAGE_peak_4_at_Snap91_5end
|association_with_transcript=-44bp_to_ENSMUST00000167014,uc009qxz.1_5end
|EntrezGene=20616
|EntrezGene=20616
|HGNC=
|HGNC=
|MCL_coexpression_id=121
|TSSclassifier=NA
|UniProt=Q8BQA2
|UniProt=Q8BQA2
|association_with_transcript=-44bp_to_ENSMUST00000167014,uc009qxz.1_5end
|cluster_id=chr9:86775533..86775547,-
|description=CAGE_peak_4_at_Snap91_5end
|id=chr9:86775533..86775547,-
|ontology_enrichment_celltype=CL:0000540!1.91e-11!33;CL:0000047!1.91e-11!33;CL:0000031!1.91e-11!33;CL:0000404!1.91e-11!33;CL:0000117!4.90e-11!23;CL:0000337!4.90e-11!23;CL:0000393!9.28e-08!39;CL:0000211!9.28e-08!39;CL:0000221!2.27e-07!44;CL:0000133!2.27e-07!44;CL:0002319!2.69e-07!43
|ontology_enrichment_celltype_v019_2=CL:0000117,1.50e-13,23;CL:0000337,1.50e-13,23;CL:0000540,8.73e-11,33;CL:0000047,8.73e-11,33;CL:0000031,8.73e-11,33;CL:0000404,8.73e-11,33;CL:0000393,1.73e-08,39;CL:0000211,1.73e-08,39;CL:0002319,2.51e-07,43;CL:0000221,4.53e-07,44;CL:0000133,4.53e-07,44
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!1.22e-26!71;UBERON:0003075!1.22e-26!71;UBERON:0007284!1.22e-26!71;UBERON:0001017!3.73e-25!73;UBERON:0005743!3.73e-25!73;UBERON:0004121!3.97e-25!102;UBERON:0000924!3.97e-25!102;UBERON:0006601!3.97e-25!102;UBERON:0000033!2.72e-24!63;UBERON:0000073!3.45e-24!75;UBERON:0001016!3.45e-24!75;UBERON:0001049!4.52e-22!52;UBERON:0005068!4.52e-22!52;UBERON:0006241!4.52e-22!52;UBERON:0007135!4.52e-22!52;UBERON:0000955!1.09e-21!50;UBERON:0006238!1.09e-21!50;UBERON:0002616!4.73e-21!49;UBERON:0003056!2.22e-20!49;UBERON:0007811!8.80e-19!86;UBERON:0003080!1.64e-17!40;UBERON:0000153!7.09e-17!94;UBERON:0002780!1.01e-16!39;UBERON:0001890!1.01e-16!39;UBERON:0006240!1.01e-16!39;UBERON:0002020!6.01e-15!34;UBERON:0002791!9.99e-13!29;UBERON:0003528!9.99e-13!29;UBERON:0001893!9.99e-13!29;UBERON:0000956!2.33e-08!21;UBERON:0001869!2.33e-08!21;UBERON:0000203!2.33e-08!21;UBERON:0002619!5.76e-08!17;UBERON:0004111!1.32e-07!122;UBERON:0000025!1.33e-07!114;UBERON:0002021!5.59e-07!10;UBERON:0000411!5.59e-07!10;UBERON:0001950!5.59e-07!10;UBERON:0000483!9.76e-07!181
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.09e-30,73;UBERON:0001016,3.74e-29,75;UBERON:0000073,6.35e-29,54;UBERON:0010314,2.48e-27,92;UBERON:0002346,2.51e-26,64;UBERON:0003075,2.51e-26,64;UBERON:0007284,2.51e-26,64;UBERON:0001049,3.90e-26,52;UBERON:0005068,3.90e-26,52;UBERON:0006241,3.90e-26,52;UBERON:0007135,3.90e-26,52;UBERON:0004121,2.42e-25,95;UBERON:0000924,2.42e-25,95;UBERON:0006601,2.42e-25,95;UBERON:0000955,1.21e-23,47;UBERON:0006238,1.21e-23,47;UBERON:0002616,2.02e-22,46;UBERON:0010371,6.36e-22,73;UBERON:0003056,3.43e-18,49;UBERON:0003080,6.89e-18,40;UBERON:0002780,1.80e-16,39;UBERON:0001890,1.80e-16,39;UBERON:0006240,1.80e-16,39;UBERON:0002020,1.45e-15,34;UBERON:0000025,3.06e-15,114;UBERON:0003528,1.36e-13,29;UBERON:0002791,1.36e-13,29;UBERON:0001893,1.36e-13,29;UBERON:0004111,1.39e-13,122;UBERON:0002021,7.42e-10,10;UBERON:0000411,7.42e-10,10;UBERON:0001950,7.42e-10,10;UBERON:0000483,2.30e-09,174;UBERON:0000119,3.89e-09,176;UBERON:0003076,6.51e-09,12;UBERON:0003057,6.51e-09,12;UBERON:0002950,1.99e-08,4;UBERON:0001891,1.99e-08,4;UBERON:0009616,1.99e-08,4;UBERON:0010286,1.99e-08,4;UBERON:0002619,3.34e-08,17;UBERON:0002420,8.96e-08,8;UBERON:0007245,8.96e-08,8;UBERON:0010009,8.96e-08,8;UBERON:0010011,8.96e-08,8;UBERON:0000454,8.96e-08,8;UBERON:0000956,9.27e-08,21;UBERON:0001869,9.27e-08,21;UBERON:0000203,9.27e-08,21
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,2.53532561402472,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0,0.630974884054146,0.856952953211411,0.441737081903227,0.489963196859816,0.479227355091182,1.83843757322004,2.20231761998777,8.04430229936683,6.14426133024974,1.45074916503213,2.19570344645783,0.52091337055676,8.09630697104005,3.37657566019008,4.73674568108111,2.35702868378934,1.13897344639282,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,14.0534782565543,7.95897485891129,0,0,0,0,9.58660092190865,4.11750542536764,0.753926112677186,4.34560800480691,3.3243009452943,7.48036960414416,4.05603157669394,0.101839363850316,0,0,4.62972082950243,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.680364991513279,0.2562274405697,1.40552586839593,4.65666067330228,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,1.62055855314913,3.78791576936336,1.77087808572663,1.69693824176116,1.39520366850245,1.3413670069981,1.40118410840603,0.822799249567402,1.47750717671186,0.972825714550269,0.584799949701329,1.09775057645525,0.939444931322602,2.94405927989778,0.92614151141356,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0.189667900953082,0.685491075658373,0,0.407302655690628,0.775809948670503,0.350679099451593,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,9.31193421929193,6.44664276257117,0,0,0,1.17131623288992,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0.388076051348264,1.07168517515796,1.77340233642274,0.713475270408282,0.822745103010605,0.304464949114599,0,0.42366414172764,0.441056796109924,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,8.71498919449395,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.387479470433193,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.205421914329655,0.25984164595559,0.537080087002444,0,0.120195449519969,0.590758108698309,0.201932899896295,0.381034033274999,0.201652370273681,0.292373642219257,0,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,2.29158205375759,0.859265911718438,1.37016503954128,3.7769694869485,2.02506750069542,3.60256962579376,4.53142408984205,4.14208249401456,0,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.468207537349412,0.384150914429216,0.516919220600519,0.952587382566147,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.887379030796687,0.476872379894642,0.726732083161643,0.188218760830661,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.429742108096597,0,0.220591419119515,0
|phase1_expression=0.80074423552397,0,0,0,0,0,0,0,0.140788722151667,0,0,0,0,0,0,0,0,0,0,0,1.44573593256819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,2.53532561402472,0.338844532069132,0,0,0,0,0,0,0.622137673850866,0,0.630974884054146,0.856952953211411,0.441737081903227,0.489963196859816,0.479227355091182,1.83843757322004,2.20231761998777,8.04430229936683,6.14426133024974,1.45074916503213,2.19570344645783,0.52091337055676,8.09630697104005,3.37657566019008,4.73674568108111,2.35702868378934,1.13897344639282,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0.593768556259299,0.173485326766136,0.913396434936424,0.230615497256059,0.753613202763113,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,14.0534782565543,7.95897485891129,0,0,0,0,9.58660092190865,4.11750542536764,0.753926112677186,4.34560800480691,3.3243009452943,7.48036960414416,4.05603157669394,0.101839363850316,0,0,4.62972082950243,0.260240885925407,0.229902104433473,0.540186389416048,0.60281927134286,0.680364991513279,0.2562274405697,1.40552586839593,4.65666067330228,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0.414251545071004,0.469052119962192,1.62055855314913,3.78791576936336,1.77087808572663,1.69693824176116,1.39520366850245,1.3413670069981,1.40118410840603,0.822799249567402,1.47750717671186,0.972825714550269,0.584799949701329,1.09775057645525,0.939444931322602,2.94405927989778,0.92614151141356,0,0,0.213288250535234,0,0,0,0,0.190225626112559,0,0.164698954724011,0,0,0,0.898819408654221,0,0,0.189667900953082,0.685491075658373,0,0.407302655690628,0.775809948670503,0.350679099451593,0.126473074248515,0,0.31399745568275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0.238043640886014,0,0,0,0,0,0.172684981865896,0,0,0,0,0,9.31193421929193,6.44664276257117,0,0,0,1.17131623288992,0.646270193198397,0.238968797952552,0,0.283076530788832,0.404810701674894,0.876767573733936,1.18586333383957,1.92792789853084,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,3.74483566329167,0.36012218806262,0.388076051348264,1.07168517515796,1.77340233642274,0.713475270408282,0.822745103010605,0.304464949114599,0,0.42366414172764,0.441056796109924,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0.291480836629851,8.71498919449395,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.216010681643603,0.418176592028937,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0.388902376688095,0.387479470433193,0.168956125490778,0,0,0.104859344425711,0,0,0.316011120628178,0.608175645870493,0.205421914329655,0.25984164595559,0.537080087002444,0,0.120195449519969,0.590758108698309,0.201932899896295,0.381034033274999,0.201652370273681,0.292373642219257,0,0.467507608726276,0.226730383615211,0,0.0897138566094757,0,0.386379188064381,0,0.183151624267265,0,0,1.12950368523413,0.920650473014354,2.29158205375759,0.859265911718438,1.37016503954128,3.7769694869485,2.02506750069542,3.60256962579376,4.53142408984205,4.14208249401456,0,0.399024873401031,0.512200817262403,0.486213434136588,0.419226325255965,0.551530525350042,0.222246727801615,0.618105171716683,0.320919209591815,0.505394423527595,0.50695859978048,0.943131706930381,0.468207537349412,0.384150914429216,0.516919220600519,0.952587382566147,0.347652977834566,0.38581844092741,0,0.441596760403192,0.342869252385415,0.887379030796687,0.476872379894642,0.726732083161643,0.188218760830661,0.25384382367503,0.548783918618318,0,0.407412341537585,0,0.237270036248348,0.394017929502254,0,0.309873682371932,0.192906610981141,0.499621155875892,0.935726433781634,0.429742108096597,0,0.220591419119515,0
|short_description=p4@Snap91
}}
}}

Latest revision as of 05:40, 27 September 2015

Short description:p4@Snap91
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_4_at_Snap91_5end
Coexpression cluster:MCL_coexpression_mm9:121
Association with transcript: -44bp_to_ENSMUST00000167014, uc009qxz.1_5end
EntrezGene:Snap91
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p4@Snap91

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.14
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.62
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.49
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.48
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F38.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.14
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.45
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I64.74
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.36
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.49
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.75
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I27.96
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A49.59
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F10.75
cortex, adult.CNhs10473.12-14D54.35
cortex, neonate N30.CNhs11107.1392-42F23.32
diencephalon, adult.CNhs10482.20-12F27.48
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G44.63
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G81.41
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D43.79
heart, embryo E15.CNhs11017.431-16C81.77
heart, embryo E16.CNhs11021.457-17C61.70
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.34
heart, neonate N00.CNhs11213.639-21E31.40
heart, neonate N03.CNhs11221.1349-25I20.82
heart, neonate N10.CNhs11118.749-24G11.48
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.94
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.69
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.78
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C29.31
medulla oblongata, neonate N30.CNhs11200.1396-42A36.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I91.93
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G83.74
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.82
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C98.71
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.26
thymus, embryo E17.CNhs10581.478-18C10.54
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.20
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.29
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.86
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.53
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.51
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.50e-1323
neuroblast (sensu Vertebrata)1.50e-1323
neuron8.73e-1133
neuronal stem cell8.73e-1133
neuroblast8.73e-1133
electrically signaling cell8.73e-1133
electrically responsive cell1.73e-0839
electrically active cell1.73e-0839
neural cell2.51e-0743
ectodermal cell4.53e-0744
neurectodermal cell4.53e-0744

Uber anatomy
Ontology termp-valuen
central nervous system3.09e-3073
nervous system3.74e-2975
regional part of nervous system6.35e-2954
structure with developmental contribution from neural crest2.48e-2792
neurectoderm2.51e-2664
neural plate2.51e-2664
presumptive neural plate2.51e-2664
neural tube3.90e-2652
neural rod3.90e-2652
future spinal cord3.90e-2652
neural keel3.90e-2652
ectoderm-derived structure2.42e-2595
ectoderm2.42e-2595
presumptive ectoderm2.42e-2595
brain1.21e-2347
future brain1.21e-2347
regional part of brain2.02e-2246
ecto-epithelium6.36e-2273
pre-chordal neural plate3.43e-1849
anterior neural tube6.89e-1840
regional part of forebrain1.80e-1639
forebrain1.80e-1639
future forebrain1.80e-1639
gray matter1.45e-1534
tube3.06e-15114
brain grey matter1.36e-1329
regional part of telencephalon1.36e-1329
telencephalon1.36e-1329
anatomical conduit1.39e-13122
occipital lobe7.42e-1010
visual cortex7.42e-1010
neocortex7.42e-1010
epithelium2.30e-09174
cell layer3.89e-09176
posterior neural tube6.51e-0912
chordal neural plate6.51e-0912
regional part of midbrain1.99e-084
midbrain1.99e-084
presumptive midbrain1.99e-084
midbrain neural tube1.99e-084
regional part of cerebral cortex3.34e-0817
basal ganglion8.96e-088
nuclear complex of neuraxis8.96e-088
aggregate regional part of brain8.96e-088
collection of basal ganglia8.96e-088
cerebral subcortex8.96e-088
cerebral cortex9.27e-0821
cerebral hemisphere9.27e-0821
pallium9.27e-0821
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:86775533..86775547,-&oldid=4295236"