FFCP PHASE1:Hg19::chr10:128359008..128359022,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:128359008..128359022,- to FFCP PHASE1:Hg19::chr10:128359008..128359022,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=118611 | |EntrezGene=118611 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26563 | |HGNC=26563 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000488181_5end | |||
|cluster_id=chr10:128359008..128359022,- | |||
|coexpression_cluster_id=C327 | |||
|description=CAGE_peak_4_at_C10orf90_5end | |||
|id=chr10:128359008..128359022,- | |||
|ontology_enrichment_celltype=CL:0000148!1.87e-12!10;CL:0000541!1.87e-12!10;CL:0000147!1.14e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000148;5.19e-18;10!CL:0000147;1.09e-12;14!CL:0000710;1.09e-08;20!CL:0002567;1.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,4.63e-18,10;CL:0000541,4.63e-18,10;CL:0000147,1.01e-12,14;CL:0000710,1.03e-08,20;CL:0002567,1.07e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.03e-15;82!UBERON:0006241;7.38e-08;3!UBERON:0003057;7.38e-08;3 | |||
|ontology_enrichment_disease=DOID:1909!1.56e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;9.00e-12;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,8.78e-12,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!7.19e-79!57;UBERON:0005068!7.19e-79!57;UBERON:0006241!7.19e-79!57;UBERON:0007135!7.19e-79!57;UBERON:0002616!1.31e-63!59;UBERON:0001017!2.26e-63!82;UBERON:0005743!4.84e-63!86;UBERON:0002780!1.05e-59!41;UBERON:0001890!1.05e-59!41;UBERON:0006240!1.05e-59!41;UBERON:0000955!8.05e-59!69;UBERON:0006238!8.05e-59!69;UBERON:0003080!3.93e-58!42;UBERON:0002020!1.08e-57!34;UBERON:0003528!1.08e-57!34;UBERON:0001893!1.16e-57!34;UBERON:0000073!3.48e-56!94;UBERON:0001016!3.48e-56!94;UBERON:0002791!8.04e-55!33;UBERON:0003075!8.60e-55!86;UBERON:0007284!8.60e-55!86;UBERON:0002346!6.30e-52!90;UBERON:0001869!1.40e-51!32;UBERON:0007023!1.75e-50!115;UBERON:0002619!1.05e-41!22;UBERON:0003056!9.72e-41!61;UBERON:0000033!8.72e-37!123;UBERON:0000956!2.38e-36!25;UBERON:0000203!2.38e-36!25;UBERON:0001950!3.56e-36!20;UBERON:0000153!1.27e-34!129;UBERON:0007811!1.27e-34!129;UBERON:0004121!1.15e-33!169;UBERON:0000924!1.22e-32!173;UBERON:0006601!1.22e-32!173;UBERON:0002308!1.73e-23!9;UBERON:0000125!1.73e-23!9;UBERON:0002420!3.52e-23!9;UBERON:0007245!3.52e-23!9;UBERON:0010009!3.52e-23!9;UBERON:0010011!3.52e-23!9;UBERON:0000454!3.52e-23!9;UBERON:0003076!8.67e-21!15;UBERON:0003057!8.67e-21!15;UBERON:0002298!1.53e-20!8;UBERON:0000025!1.31e-17!194;UBERON:0009663!2.19e-17!7;UBERON:0000349!1.88e-16!5;UBERON:0001871!2.27e-14!7;UBERON:0004111!4.21e-14!241;UBERON:0000200!1.37e-13!6;UBERON:0004733!5.93e-13!12;UBERON:0002028!5.93e-13!12;UBERON:0007277!5.93e-13!12;UBERON:0004732!7.10e-12!13;UBERON:0006331!3.04e-11!3;UBERON:0000988!3.73e-11!3;UBERON:0000477!3.94e-11!286;UBERON:0002240!5.23e-11!3;UBERON:0001872!6.23e-11!5;UBERON:0001896!6.62e-11!3;UBERON:0005290!6.62e-11!3;UBERON:0010096!6.62e-11!3;UBERON:0002021!1.25e-10!5;UBERON:0002771!1.33e-10!3;UBERON:0000483!2.05e-10!309;UBERON:0000119!3.23e-10!312;UBERON:0000475!7.78e-10!365;UBERON:0000064!6.81e-09!219;UBERON:0001875!2.38e-08!2;UBERON:0006514!2.38e-08!2;UBERON:0001897!3.26e-08!2;UBERON:0000369!5.88e-08!4;UBERON:0002435!5.88e-08!4;UBERON:0000204!5.88e-08!4;UBERON:0010082!5.88e-08!4;UBERON:0002148!6.50e-08!2;UBERON:0009662!6.50e-08!2;UBERON:0001876!1.46e-07!2;UBERON:0001954!1.90e-07!2;UBERON:0003022!1.90e-07!2;UBERON:0002421!1.90e-07!2;UBERON:0002600!1.90e-07!2;UBERON:0005174!9.47e-07!5;UBERON:0001137!9.47e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.33e-43;34!UBERON:0000073;9.10e-41;53!UBERON:0002616;9.10e-41;53!UBERON:0003528;7.45e-40;34!UBERON:0002020;7.45e-40;34!UBERON:0002780;2.50e-39;41!UBERON:0001890;2.50e-39;41!UBERON:0002791;7.87e-39;32!UBERON:0001869;1.13e-37;32!UBERON:0002619;2.76e-32;22!UBERON:0001950;2.81e-30;20!UBERON:0002298;7.84e-29;6!UBERON:0000956;3.01e-28;25!UBERON:0000203;3.01e-28;25!UBERON:0000125;1.37e-26;9!UBERON:0002308;1.37e-26;9!UBERON:0001017;1.34e-20;75!UBERON:0000955;1.10e-19;68!UBERON:0002420;1.15e-19;9!UBERON:0007245;1.15e-19;9!UBERON:0010009;1.15e-19;9!UBERON:0010011;1.15e-19;9!UBERON:0000454;1.15e-19;9!UBERON:0009663;4.25e-18;7!UBERON:0001016;6.84e-17;83!UBERON:0000988;1.85e-15;3!UBERON:0001896;3.77e-15;3!UBERON:0005290;3.77e-15;3!UBERON:0004733;3.76e-14;12!UBERON:0002028;3.76e-14;12!UBERON:0000200;4.59e-13;6!UBERON:0004732;5.10e-13;13!UBERON:0001875;1.63e-11;2!UBERON:0006514;1.63e-11;2!UBERON:0001897;2.59e-11;2!UBERON:0010225;2.59e-11;2!UBERON:0001871;3.23e-11;6!UBERON:0007023;3.47e-11;114!UBERON:0002771;8.85e-11;2!UBERON:0002148;8.85e-11;2!UBERON:0006331;8.85e-11;2!UBERON:0009662;8.85e-11;2!UBERON:0001872;2.73e-09;5!UBERON:0000349;2.73e-09;5!UBERON:0002021;4.14e-09;5!UBERON:0011216;2.71e-08;132!UBERON:0002240;7.38e-08;3!UBERON:0005174;7.38e-08;3!UBERON:0001137;7.38e-08;3!UBERON:0001894;5.65e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.42e-76,56;UBERON:0005068,7.42e-76,56;UBERON:0006241,7.42e-76,56;UBERON:0007135,7.42e-76,56;UBERON:0000073,1.52e-69,53;UBERON:0002616,1.52e-69,53;UBERON:0000955,4.01e-56,68;UBERON:0006238,4.01e-56,68;UBERON:0002780,6.25e-56,41;UBERON:0001890,6.25e-56,41;UBERON:0003080,6.25e-56,41;UBERON:0006240,6.25e-56,41;UBERON:0001017,1.41e-53,81;UBERON:0003528,1.23e-50,34;UBERON:0002020,1.23e-50,34;UBERON:0001893,1.34e-50,34;UBERON:0003075,4.82e-50,82;UBERON:0007284,4.82e-50,82;UBERON:0001016,1.11e-47,89;UBERON:0002346,1.93e-47,86;UBERON:0010371,3.24e-44,104;UBERON:0002791,2.97e-43,32;UBERON:0001869,5.57e-43,32;UBERON:0007023,3.22e-37,114;UBERON:0003056,3.34e-36,61;UBERON:0002619,3.99e-32,22;UBERON:0010314,6.75e-31,132;UBERON:0001950,4.48e-30,20;UBERON:0002298,4.27e-29,6;UBERON:0000956,4.16e-28,25;UBERON:0000203,4.16e-28,25;UBERON:0000125,1.73e-26,9;UBERON:0002308,1.73e-26,9;UBERON:0004121,1.03e-25,171;UBERON:0000924,1.03e-25,171;UBERON:0006601,1.03e-25,171;UBERON:0003076,4.52e-20,15;UBERON:0003057,4.52e-20,15;UBERON:0002420,1.36e-19,9;UBERON:0007245,1.36e-19,9;UBERON:0010009,1.36e-19,9;UBERON:0010011,1.36e-19,9;UBERON:0000454,1.36e-19,9;UBERON:0009663,6.18e-18,7;UBERON:0000025,9.61e-18,192;UBERON:0011216,1.48e-16,223;UBERON:0000988,1.28e-15,3;UBERON:0001896,2.96e-15,3;UBERON:0005290,2.96e-15,3;UBERON:0010096,2.96e-15,3;UBERON:0004733,2.80e-14,12;UBERON:0002028,2.80e-14,12;UBERON:0007277,2.80e-14,12;UBERON:0004732,3.89e-13,13;UBERON:0004111,6.89e-13,240;UBERON:0000200,7.77e-13,6;UBERON:0001875,1.63e-11,2;UBERON:0006514,1.63e-11,2;UBERON:0001897,2.59e-11,2;UBERON:0010225,2.59e-11,2;UBERON:0001871,3.86e-11,6;UBERON:0002148,7.09e-11,2;UBERON:0006331,7.09e-11,2;UBERON:0009662,7.09e-11,2;UBERON:0002771,1.35e-10,2;UBERON:0000483,1.45e-10,306;UBERON:0000119,2.15e-10,309;UBERON:0000349,2.37e-09,5;UBERON:0001872,2.66e-09,5;UBERON:0002021,4.85e-09,5;UBERON:0002240,7.64e-08,3;UBERON:0005174,7.64e-08,3;UBERON:0001137,7.64e-08,3;UBERON:0001894,4.84e-07,7;UBERON:0006222,4.84e-07,7 | |||
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|short_description=p4@C10orf90 | |||
}} | }} |
Latest revision as of 00:44, 17 September 2015
Short description: | p4@C10orf90 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C10orf90_5end |
Coexpression cluster: | C327_Melanocyte_corpus_thalamus_substantia_melanoma_globus_optic |
Association with transcript: | 0bp_to_ENST00000488181_5end |
EntrezGene: | C10orf90 |
HGNC: | 26563 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 4.63e-18 | 10 |
melanoblast | 4.63e-18 | 10 |
pigment cell | 1.01e-12 | 14 |
neurecto-epithelial cell | 1.03e-08 | 20 |
light melanocyte | 1.07e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
melanoma | 8.78e-12 | 2 |