FFCP PHASE1:Hg19::chr13:112721210..112721227,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:112721210..112721227,+ to FFCP PHASE1:Hg19::chr13:112721210..112721227,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr13:112721210..112721227,+ | |||
|description=CAGE_peak_at_chr13:112721210..112721227,+ | |||
|id=chr13:112721210..112721227,+ | |||
|ontology_enrichment_celltype=CL:0002605!7.19e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.88e-09;25!CL:0002605;7.11e-09;3!CL:0000128;9.98e-09;7!CL:0000126;9.98e-09;7!CL:0000127;9.98e-09;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-09,25;CL:0002605,7.12e-09,3;CL:0000128,8.17e-09,7;CL:0000126,8.17e-09,7;CL:0000127,8.17e-09,7;CL:0002453,8.17e-09,7;CL:0000047,1.45e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.81e-15;82!UBERON:0006215;3.22e-08;3!UBERON:0006241;1.32e-07;3!UBERON:0003057;1.32e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.46e-76!57;UBERON:0005068!5.46e-76!57;UBERON:0006241!5.46e-76!57;UBERON:0007135!5.46e-76!57;UBERON:0001017!3.82e-72!82;UBERON:0005743!3.15e-70!86;UBERON:0000073!5.74e-66!94;UBERON:0001016!5.74e-66!94;UBERON:0002616!5.86e-64!59;UBERON:0000955!2.84e-59!69;UBERON:0006238!2.84e-59!69;UBERON:0002780!1.27e-57!41;UBERON:0001890!1.27e-57!41;UBERON:0006240!1.27e-57!41;UBERON:0002346!4.41e-57!90;UBERON:0003080!5.74e-56!42;UBERON:0002020!1.94e-54!34;UBERON:0003528!1.94e-54!34;UBERON:0001893!2.52e-54!34;UBERON:0003075!5.24e-53!86;UBERON:0007284!5.24e-53!86;UBERON:0002791!1.10e-52!33;UBERON:0001869!2.01e-51!32;UBERON:0000956!1.46e-40!25;UBERON:0000203!1.46e-40!25;UBERON:0003056!7.89e-39!61;UBERON:0002619!2.89e-35!22;UBERON:0000924!4.56e-35!173;UBERON:0006601!4.56e-35!173;UBERON:0007023!1.02e-32!115;UBERON:0004121!5.36e-32!169;UBERON:0001950!7.37e-32!20;UBERON:0000033!2.32e-30!123;UBERON:0000153!2.22e-29!129;UBERON:0007811!2.22e-29!129;UBERON:0003076!3.87e-20!15;UBERON:0003057!3.87e-20!15;UBERON:0004732!4.11e-17!13;UBERON:0004733!7.64e-16!12;UBERON:0002028!7.64e-16!12;UBERON:0007277!7.64e-16!12;UBERON:0000025!2.00e-15!194;UBERON:0002308!4.99e-15!9;UBERON:0000125!4.99e-15!9;UBERON:0002420!8.75e-15!9;UBERON:0007245!8.75e-15!9;UBERON:0010009!8.75e-15!9;UBERON:0010011!8.75e-15!9;UBERON:0000454!8.75e-15!9;UBERON:0009663!6.93e-12!7;UBERON:0002680!8.00e-12!9;UBERON:0001895!8.00e-12!9;UBERON:0010092!8.00e-12!9;UBERON:0001871!5.27e-11!7;UBERON:0000200!7.32e-11!6;UBERON:0002021!3.95e-10!5;UBERON:0004111!6.01e-10!241;UBERON:0002298!6.99e-10!8;UBERON:0001872!1.53e-09!5;UBERON:0000349!2.03e-09!5;UBERON:0000064!8.84e-08!219;UBERON:0000369!1.08e-07!4;UBERON:0002435!1.08e-07!4;UBERON:0000204!1.08e-07!4;UBERON:0010082!1.08e-07!4;UBERON:0000483!1.14e-07!309;UBERON:0000119!1.89e-07!312;UBERON:0002037!1.92e-07!6;UBERON:0006215!1.92e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;6.64e-64;34!UBERON:0003528;1.13e-63;34!UBERON:0002020;1.13e-63;34!UBERON:0001869;1.99e-63;32!UBERON:0002791;4.18e-63;32!UBERON:0000956;2.14e-55;25!UBERON:0000203;2.14e-55;25!UBERON:0000073;1.49e-52;53!UBERON:0002616;1.49e-52;53!UBERON:0002780;2.20e-51;41!UBERON:0001890;2.20e-51;41!UBERON:0002619;4.46e-48;22!UBERON:0001950;2.28e-43;20!UBERON:0000955;5.36e-36;68!UBERON:0001017;1.15e-35;75!UBERON:0001016;4.29e-31;83!UBERON:0004732;5.15e-23;13!UBERON:0004733;3.15e-21;12!UBERON:0002028;3.15e-21;12!UBERON:0000125;4.12e-20;9!UBERON:0002308;4.12e-20;9!UBERON:0002420;1.22e-19;9!UBERON:0007245;1.22e-19;9!UBERON:0010009;1.22e-19;9!UBERON:0010011;1.22e-19;9!UBERON:0000454;1.22e-19;9!UBERON:0002680;9.03e-16;9!UBERON:0001895;9.03e-16;9!UBERON:0009663;1.01e-15;7!UBERON:0000200;3.19e-14;6!UBERON:0002021;2.07e-13;5!UBERON:0002298;2.57e-13;6!UBERON:0001872;1.64e-12;5!UBERON:0001871;1.73e-12;6!UBERON:0000349;3.04e-12;5!UBERON:0007023;3.82e-12;114!UBERON:0011216;4.72e-10;132!UBERON:0000369;6.75e-10;4!UBERON:0002435;6.75e-10;4!UBERON:0000204;6.75e-10;4!UBERON:0002037;9.64e-10;6!UBERON:0005383;7.03e-08;3!UBERON:0005382;7.03e-08;3!UBERON:0000988;7.55e-08;3!UBERON:0001870;7.55e-08;3!UBERON:0002240;1.32e-07;3!UBERON:0005174;1.32e-07;3!UBERON:0001137;1.32e-07;3!UBERON:0001896;3.86e-07;3!UBERON:0005290;3.86e-07;3!UBERON:0002346;5.37e-07;4!UBERON:0000923;5.37e-07;4!UBERON:0010316;5.37e-07;4!UBERON:0005291;5.37e-07;4!UBERON:0010314;9.16e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,9.11e-100,56;UBERON:0005068,9.11e-100,56;UBERON:0006241,9.11e-100,56;UBERON:0007135,9.11e-100,56;UBERON:0001017,2.85e-94,81;UBERON:0000073,2.46e-93,53;UBERON:0002616,2.46e-93,53;UBERON:0001016,2.20e-86,89;UBERON:0000955,3.51e-79,68;UBERON:0006238,3.51e-79,68;UBERON:0002346,2.60e-75,86;UBERON:0003528,9.86e-75,34;UBERON:0002020,9.86e-75,34;UBERON:0001893,1.41e-74,34;UBERON:0002780,5.15e-72,41;UBERON:0001890,5.15e-72,41;UBERON:0003080,5.15e-72,41;UBERON:0006240,5.15e-72,41;UBERON:0001869,1.45e-70,32;UBERON:0002791,3.45e-70,32;UBERON:0003075,1.40e-69,82;UBERON:0007284,1.40e-69,82;UBERON:0000956,1.51e-55,25;UBERON:0000203,1.51e-55,25;UBERON:0010371,1.86e-54,104;UBERON:0003056,1.46e-50,61;UBERON:0002619,3.16e-48,22;UBERON:0004121,4.12e-47,171;UBERON:0000924,4.12e-47,171;UBERON:0006601,4.12e-47,171;UBERON:0001950,1.62e-43,20;UBERON:0010314,7.94e-40,132;UBERON:0007023,4.24e-36,114;UBERON:0011216,2.86e-29,223;UBERON:0003076,2.55e-27,15;UBERON:0003057,2.55e-27,15;UBERON:0004732,3.84e-23,13;UBERON:0004733,2.16e-21,12;UBERON:0002028,2.16e-21,12;UBERON:0007277,2.16e-21,12;UBERON:0000025,1.10e-20,192;UBERON:0000125,4.28e-20,9;UBERON:0002308,4.28e-20,9;UBERON:0002420,9.29e-20,9;UBERON:0007245,9.29e-20,9;UBERON:0010009,9.29e-20,9;UBERON:0010011,9.29e-20,9;UBERON:0000454,9.29e-20,9;UBERON:0002680,7.52e-16,9;UBERON:0001895,7.52e-16,9;UBERON:0010092,7.52e-16,9;UBERON:0009663,9.14e-16,7;UBERON:0000200,2.34e-14,6;UBERON:0004111,6.51e-14,240;UBERON:0002298,2.09e-13,6;UBERON:0002021,2.38e-13,5;UBERON:0001871,1.35e-12,6;UBERON:0001872,1.53e-12,5;UBERON:0000349,2.25e-12,5;UBERON:0000483,4.58e-10,306;UBERON:0000369,5.32e-10,4;UBERON:0002435,5.32e-10,4;UBERON:0000204,5.32e-10,4;UBERON:0010082,5.32e-10,4;UBERON:0000119,7.66e-10,309;UBERON:0002037,8.11e-10,6;UBERON:0006215,8.11e-10,6;UBERON:0005383,6.23e-08,3;UBERON:0005382,6.23e-08,3;UBERON:0001870,6.39e-08,3;UBERON:0000988,7.56e-08,3;UBERON:0002240,1.31e-07,3;UBERON:0005174,1.31e-07,3;UBERON:0001137,1.31e-07,3;UBERON:0001896,3.15e-07,3;UBERON:0005290,3.15e-07,3;UBERON:0010096,3.15e-07,3 | |||
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|short_description=p@chr13:112721210..112721227,+ | |||
}} | }} |
Latest revision as of 14:40, 24 July 2015
Short description: | p@chr13:112721210..112721227, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:112721210..112721227, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.69e-09 | 25 |
astrocyte of the cerebral cortex | 7.12e-09 | 3 |
oligodendrocyte | 8.17e-09 | 7 |
macroglial cell | 8.17e-09 | 7 |
astrocyte | 8.17e-09 | 7 |
oligodendrocyte precursor cell | 8.17e-09 | 7 |
neuronal stem cell | 1.45e-08 | 8 |