FFCP PHASE1:Hg19::chr13:78271840..78271862,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr13:78271840..78271862,+ to FFCP PHASE1:Hg19::chr13:78271840..78271862,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=122060 | |EntrezGene=122060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26387 | |HGNC=26387 | ||
|TSSclassifier=strong | |||
|UniProt=Q7L0J2 | |UniProt=Q7L0J2 | ||
|association_with_transcript=-126bp_to_NM_001242868_5end | |||
|cluster_id=chr13:78271840..78271862,+ | |||
|description=CAGE_peak_2_at_SLAIN1_5end | |||
|id=chr13:78271840..78271862,+ | |||
|ontology_enrichment_celltype=CL:0000542!1.93e-19!53;CL:0000051!1.93e-19!53;CL:0000838!3.45e-19!52;CL:0000084!4.68e-11!25;CL:0000827!4.68e-11!25;CL:0000791!9.33e-09!18;CL:0000789!9.33e-09!18;CL:0002420!9.33e-09!18;CL:0002419!9.33e-09!18;CL:0000790!9.33e-09!18;CL:0000945!1.36e-08!24;CL:0000826!1.36e-08!24;CL:0002087!1.41e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.33e-12;53!CL:0000084;1.88e-12;25!CL:0000791;9.51e-10;18!CL:0000789;9.51e-10;18!CL:0002419;9.51e-10;18!CL:0000945;1.56e-09;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,4.41e-22,53;CL:0000051,4.41e-22,53;CL:0000838,8.60e-22,52;CL:0000084,1.87e-12,25;CL:0000827,1.87e-12,25;CL:0000791,8.09e-10,18;CL:0000789,8.09e-10,18;CL:0002420,8.09e-10,18;CL:0002419,8.09e-10,18;CL:0000790,8.09e-10,18;CL:0000945,1.24e-09,24;CL:0000826,1.24e-09,24 | |||
|ontology_enrichment_development_v019=CL:0000051;1.33e-12;53!CL:0000790;9.51e-10;18!UBERON:0006601;1.37e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.56e-31!115;UBERON:0000073!3.86e-31!94;UBERON:0001016!3.86e-31!94;UBERON:0005743!1.63e-29!86;UBERON:0001049!3.46e-28!57;UBERON:0005068!3.46e-28!57;UBERON:0006241!3.46e-28!57;UBERON:0007135!3.46e-28!57;UBERON:0001017!3.76e-28!82;UBERON:0002346!5.65e-24!90;UBERON:0002780!7.72e-24!41;UBERON:0001890!7.72e-24!41;UBERON:0006240!7.72e-24!41;UBERON:0002616!5.46e-23!59;UBERON:0003080!1.31e-22!42;UBERON:0003075!2.53e-22!86;UBERON:0007284!2.53e-22!86;UBERON:0000955!5.34e-22!69;UBERON:0006238!5.34e-22!69;UBERON:0001893!2.43e-21!34;UBERON:0002791!1.16e-20!33;UBERON:0002020!1.20e-20!34;UBERON:0003528!1.20e-20!34;UBERON:0001869!2.18e-20!32;UBERON:0003056!2.01e-19!61;UBERON:0000956!2.41e-16!25;UBERON:0000203!2.41e-16!25;UBERON:0002619!9.20e-15!22;UBERON:0001950!1.43e-13!20;UBERON:0000153!2.18e-11!129;UBERON:0007811!2.18e-11!129;UBERON:0000924!5.90e-11!173;UBERON:0006601!5.90e-11!173;UBERON:0000033!5.39e-10!123;UBERON:0004121!6.89e-10!169;UBERON:0003076!7.67e-07!15;UBERON:0003057!7.67e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.88e-21;32!UBERON:0001893;3.99e-21;34!UBERON:0002791;8.70e-21;32!UBERON:0003528;1.47e-20;34!UBERON:0002020;1.47e-20;34!UBERON:0002780;1.07e-19;41!UBERON:0001890;1.07e-19;41!UBERON:0000956;1.59e-18;25!UBERON:0000203;1.59e-18;25!UBERON:0000073;2.28e-18;53!UBERON:0002616;2.28e-18;53!UBERON:0002619;1.10e-16;22!UBERON:0001950;2.65e-15;20!UBERON:0000955;1.88e-12;68!UBERON:0001017;1.90e-12;75!UBERON:0001016;2.44e-12;83!UBERON:0007023;9.20e-10;114!UBERON:0002420;4.71e-07;9!UBERON:0007245;4.71e-07;9!UBERON:0010009;4.71e-07;9!UBERON:0010011;4.71e-07;9!UBERON:0000454;4.71e-07;9 | |||
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| ||
|short_description=p2@SLAIN1 | |||
}} | }} |
Latest revision as of 01:36, 18 September 2015
Short description: | p2@SLAIN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLAIN1_5end |
Coexpression cluster: | NA |
Association with transcript: | -126bp_to_NM_001242868_5end |
EntrezGene: | SLAIN1 |
HGNC: | 26387 |
UniProt: | Q7L0J2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 4.41e-22 | 53 |
common lymphoid progenitor | 4.41e-22 | 53 |
lymphoid lineage restricted progenitor cell | 8.60e-22 | 52 |
T cell | 1.87e-12 | 25 |
pro-T cell | 1.87e-12 | 25 |
mature alpha-beta T cell | 8.09e-10 | 18 |
alpha-beta T cell | 8.09e-10 | 18 |
immature T cell | 8.09e-10 | 18 |
mature T cell | 8.09e-10 | 18 |
immature alpha-beta T cell | 8.09e-10 | 18 |
lymphocyte of B lineage | 1.24e-09 | 24 |
pro-B cell | 1.24e-09 | 24 |