FFCP PHASE1:Hg19::chr1:156117128..156117137,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:156117128..156117137,+ to FFCP PHASE1:Hg19::chr1:156117128..156117137,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=64218 | |EntrezGene=64218 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10729 | |HGNC=10729 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TCI6 | |UniProt=Q5TCI6 | ||
|association_with_transcript=-19bp_to_ENST00000435124_5end | |||
|cluster_id=chr1:156117128..156117137,+ | |||
|coexpression_cluster_id=C3878 | |||
|description=CAGE_peak_11_at_SEMA4A_5end | |||
|id=chr1:156117128..156117137,+ | |||
|ontology_enrichment_celltype=CL:0002586!1.91e-11!3;CL:0000149!1.09e-08!4 | |||
|ontology_enrichment_celltype_v019=CL:0002586;8.14e-07;3 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;5.80e-07;3!UBERON:0006241;8.14e-07;3!UBERON:0003057;8.14e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.23e-68!57;UBERON:0005068!3.23e-68!57;UBERON:0006241!3.23e-68!57;UBERON:0007135!3.23e-68!57;UBERON:0005743!1.52e-66!86;UBERON:0000073!2.39e-62!94;UBERON:0001016!2.39e-62!94;UBERON:0003075!1.42e-60!86;UBERON:0007284!1.42e-60!86;UBERON:0002020!2.97e-59!34;UBERON:0003528!2.97e-59!34;UBERON:0001893!3.37e-59!34;UBERON:0001869!4.43e-58!32;UBERON:0002616!1.11e-57!59;UBERON:0002346!1.80e-57!90;UBERON:0000955!2.56e-57!69;UBERON:0006238!2.56e-57!69;UBERON:0002780!1.14e-56!41;UBERON:0001890!1.14e-56!41;UBERON:0006240!1.14e-56!41;UBERON:0001017!2.19e-56!82;UBERON:0002791!3.10e-56!33;UBERON:0003080!3.49e-55!42;UBERON:0003056!3.10e-52!61;UBERON:0002619!2.29e-42!22;UBERON:0000033!3.61e-41!123;UBERON:0000153!8.11e-39!129;UBERON:0007811!8.11e-39!129;UBERON:0007023!1.11e-38!115;UBERON:0000956!5.84e-37!25;UBERON:0000203!5.84e-37!25;UBERON:0001950!5.30e-36!20;UBERON:0004121!2.96e-32!169;UBERON:0000924!2.79e-31!173;UBERON:0006601!2.79e-31!173;UBERON:0002308!1.44e-24!9;UBERON:0000125!1.44e-24!9;UBERON:0002420!3.06e-19!9;UBERON:0007245!3.06e-19!9;UBERON:0010009!3.06e-19!9;UBERON:0010011!3.06e-19!9;UBERON:0000454!3.06e-19!9;UBERON:0009663!2.66e-18!7;UBERON:0000025!3.24e-16!194;UBERON:0001871!7.35e-16!7;UBERON:0000369!2.43e-15!4;UBERON:0002435!2.43e-15!4;UBERON:0000204!2.43e-15!4;UBERON:0010082!2.43e-15!4;UBERON:0000200!9.00e-15!6;UBERON:0003076!6.93e-14!15;UBERON:0003057!6.93e-14!15;UBERON:0000064!2.15e-13!219;UBERON:0000475!2.29e-13!365;UBERON:0000349!1.32e-12!5;UBERON:0001872!2.57e-12!5;UBERON:0000966!4.55e-12!5;UBERON:0005388!4.55e-12!5;UBERON:0001802!4.55e-12!5;UBERON:0005383!8.98e-12!3;UBERON:0005382!8.98e-12!3;UBERON:0001781!1.91e-11!3;UBERON:0001782!1.91e-11!3;UBERON:0005424!1.91e-11!3;UBERON:0000483!1.98e-11!309;UBERON:0004111!2.39e-11!241;UBERON:0000119!3.17e-11!312;UBERON:0002771!3.48e-11!3;UBERON:0000988!3.73e-11!3;UBERON:0002298!8.14e-11!8;UBERON:0004733!5.89e-10!12;UBERON:0002028!5.89e-10!12;UBERON:0007277!5.89e-10!12;UBERON:0000477!1.16e-09!286;UBERON:0004732!3.87e-09!13;UBERON:0000062!7.95e-09!511;UBERON:0001954!1.39e-08!2;UBERON:0003022!1.39e-08!2;UBERON:0002421!1.39e-08!2;UBERON:0002600!1.39e-08!2;UBERON:0001873!2.40e-08!2;UBERON:0010122!2.40e-08!2;UBERON:0001897!4.43e-08!2;UBERON:0002148!4.59e-08!2;UBERON:0009662!4.59e-08!2;UBERON:0001875!7.52e-08!2;UBERON:0006514!7.52e-08!2;UBERON:0000481!1.48e-07!347;UBERON:0002021!4.94e-07!5;UBERON:0005174!6.59e-07!5;UBERON:0001137!6.59e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.16e-34;22!UBERON:0003528;3.47e-34;34!UBERON:0002020;3.47e-34;34!UBERON:0000956;1.22e-30;25!UBERON:0000203;1.22e-30;25!UBERON:0000349;2.85e-30;5!UBERON:0002791;4.82e-29;32!UBERON:0001869;4.82e-29;32!UBERON:0001950;4.68e-28;20!UBERON:0001893;4.64e-26;34!UBERON:0002780;2.19e-22;41!UBERON:0001890;2.19e-22;41!UBERON:0002581;7.36e-18;1!UBERON:0001882;7.36e-18;1!UBERON:0002022;7.36e-18;1!UBERON:0005403;7.36e-18;1!UBERON:0000966;2.25e-14;5!UBERON:0005388;2.25e-14;5!UBERON:0001802;2.25e-14;5!UBERON:0001872;3.36e-14;5!UBERON:0000073;8.41e-14;53!UBERON:0002616;8.41e-14;53!UBERON:0001871;2.03e-10;6!UBERON:0001876;1.33e-09;2!UBERON:0001954;1.33e-09;2!UBERON:0002148;1.33e-09;2!UBERON:0006331;1.33e-09;2!UBERON:0009662;1.33e-09;2!UBERON:0003022;1.33e-09;2!UBERON:0002421;1.33e-09;2!UBERON:0002600;1.33e-09;2!UBERON:0001016;8.93e-09;83!UBERON:0002420;2.65e-08;9!UBERON:0000125;2.65e-08;9!UBERON:0007245;2.65e-08;9!UBERON:0002308;2.65e-08;9!UBERON:0010009;2.65e-08;9!UBERON:0010011;2.65e-08;9!UBERON:0000454;2.65e-08;9!UBERON:0001017;1.15e-07;75!UBERON:0000988;8.14e-07;3!UBERON:0001870;8.14e-07;3!UBERON:0002240;8.14e-07;3!UBERON:0001781;8.14e-07;3!UBERON:0005174;8.14e-07;3!UBERON:0001782;8.14e-07;3!UBERON:0001137;8.14e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.92e-37,34;UBERON:0002020,1.92e-37,34;UBERON:0002619,9.04e-35,22;UBERON:0002791,1.72e-31,32;UBERON:0001869,1.72e-31,32;UBERON:0000956,9.75e-31,25;UBERON:0000203,9.75e-31,25;UBERON:0000349,1.56e-30,5;UBERON:0001893,1.14e-29,34;UBERON:0001049,3.65e-28,56;UBERON:0005068,3.65e-28,56;UBERON:0006241,3.65e-28,56;UBERON:0007135,3.65e-28,56;UBERON:0001950,3.88e-28,20;UBERON:0003075,8.85e-28,82;UBERON:0007284,8.85e-28,82;UBERON:0002346,1.81e-26,86;UBERON:0003056,6.69e-26,61;UBERON:0002780,1.16e-24,41;UBERON:0001890,1.16e-24,41;UBERON:0003080,1.16e-24,41;UBERON:0006240,1.16e-24,41;UBERON:0000073,4.34e-24,53;UBERON:0002616,4.34e-24,53;UBERON:0010371,8.36e-22,104;UBERON:0001017,3.93e-19,81;UBERON:0000955,1.90e-18,68;UBERON:0006238,1.90e-18,68;UBERON:0002022,3.75e-18,1;UBERON:0001882,5.26e-18,1;UBERON:0005403,5.26e-18,1;UBERON:0002581,1.03e-17,1;UBERON:0001016,3.45e-17,89;UBERON:0010314,4.81e-17,132;UBERON:0001872,4.11e-14,5;UBERON:0007023,9.23e-14,114;UBERON:0004121,8.03e-13,171;UBERON:0000924,8.03e-13,171;UBERON:0006601,8.03e-13,171;UBERON:0000966,4.81e-12,6;UBERON:0005388,4.81e-12,6;UBERON:0001802,4.81e-12,6;UBERON:0001871,1.39e-10,6;UBERON:0001876,1.03e-09,2;UBERON:0001954,1.22e-09,2;UBERON:0003022,1.22e-09,2;UBERON:0002421,1.22e-09,2;UBERON:0002600,1.22e-09,2;UBERON:0002148,1.71e-09,2;UBERON:0006331,1.71e-09,2;UBERON:0009662,1.71e-09,2;UBERON:0002420,2.20e-08,9;UBERON:0007245,2.20e-08,9;UBERON:0010009,2.20e-08,9;UBERON:0010011,2.20e-08,9;UBERON:0000454,2.20e-08,9;UBERON:0000125,2.75e-08,9;UBERON:0002308,2.75e-08,9;UBERON:0000025,9.56e-08,192;UBERON:0000483,7.99e-07,306;UBERON:0002240,8.15e-07,3;UBERON:0005174,8.15e-07,3;UBERON:0001137,8.15e-07,3;UBERON:0000119,9.54e-07,309;UBERON:0000988,9.64e-07,3 | |||
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|short_description=p11@SEMA4A | |||
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Latest revision as of 15:10, 17 September 2015
Short description: | p11@SEMA4A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_SEMA4A_5end |
Coexpression cluster: | C3878_retina_temporal_amygdala_nucleus_putamen_insula_olfactory |
Association with transcript: | -19bp_to_ENST00000435124_5end |
EntrezGene: | SEMA4A |
HGNC: | 10729 |
UniProt: | Q5TCI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data