FFCP PHASE1:Hg19::chr3:147127177..147127194,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:147127177..147127194,+ to FFCP PHASE1:Hg19::chr3:147127177..147127194,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |UniProt=Q15915 | ||
|association_with_transcript=0bp_to_NM_003412,uc003ewe.2_5end | |||
|cluster_id=chr3:147127177..147127194,+ | |||
|coexpression_cluster_id=C711 | |||
|description=CAGE_peak_2_at_ZIC1_5end | |||
|id=chr3:147127177..147127194,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.63e-10!25;CL:0000133!6.18e-10!59;CL:0000243!4.69e-09!15;CL:0000125!4.69e-09!15;CL:0000030!4.69e-09!15;CL:0000339!4.69e-09!15;CL:0000095!7.90e-09!17;CL:0000123!7.90e-09!17;CL:0000221!4.62e-08!71;CL:0000333!1.17e-07!41;CL:0000128!2.38e-07!7;CL:0000126!2.38e-07!7;CL:0000127!2.38e-07!7;CL:0002453!2.38e-07!7;CL:0002620!3.23e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.90e-10;25!CL:0000243;1.08e-08;15!CL:0000125;1.08e-08;15!CL:0002559;1.09e-08;5!CL:0000128;6.96e-08;7!CL:0000126;6.96e-08;7!CL:0000127;6.96e-08;7!CL:0000095;1.69e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,4.72e-13,59;CL:0000221,4.37e-12,72;CL:0002319,1.71e-10,25;CL:0000333,7.23e-09,41;CL:0000243,1.05e-08,15;CL:0000125,1.05e-08,15;CL:0000030,1.05e-08,15;CL:0000339,1.05e-08,15;CL:0002559,1.13e-08,5;CL:0000128,6.54e-08,7;CL:0000126,6.54e-08,7;CL:0000127,6.54e-08,7;CL:0002453,6.54e-08,7;CL:0000095,1.64e-07,17;CL:0000123,1.64e-07,17 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.82e-11;82!CL:0000339;1.08e-08;15!CL:0000133;9.99e-07;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0000073;4.03e-32;53!UBERON:0002616;4.03e-32;53!UBERON:0003528;1.14e-30;34!UBERON:0002020;1.14e-30;34!UBERON:0001893;1.32e-30;34!UBERON:0002791;2.85e-30;32!UBERON:0001869;3.09e-30;32!UBERON:0001017;4.33e-29;75!UBERON:0002780;4.66e-29;41!UBERON:0001890;4.66e-29;41!UBERON:0000955;1.93e-26;68!UBERON:0001016;2.41e-26;83!UBERON:0000956;5.20e-25;25!UBERON:0000203;5.20e-25;25!UBERON:0002619;8.02e-22;22!UBERON:0004732;9.02e-21;13!UBERON:0001950;1.83e-19;20!UBERON:0004733;2.06e-19;12!UBERON:0002028;2.06e-19;12!UBERON:0002680;4.85e-15;9!UBERON:0001895;4.85e-15;9!UBERON:0000125;2.86e-12;9!UBERON:0002308;2.86e-12;9!UBERON:0002420;6.55e-12;9!UBERON:0007245;6.55e-12;9!UBERON:0010009;6.55e-12;9!UBERON:0010011;6.55e-12;9!UBERON:0000454;6.55e-12;9!UBERON:0006876;1.06e-11;11!UBERON:0002037;2.86e-11;6!UBERON:0011216;1.34e-10;132!UBERON:0009663;7.21e-10;7!UBERON:0002298;7.76e-10;6!UBERON:0005284;6.30e-09;5!UBERON:0002073;1.09e-08;5!UBERON:0004121;1.91e-08;165!UBERON:0010314;2.10e-08;132!UBERON:0011135;9.48e-08;5!UBERON:0002216;9.48e-08;5!UBERON:0011134;9.48e-08;5!UBERON:0002209;9.48e-08;5!UBERON:0002213;9.48e-08;5!UBERON:0007844;9.48e-08;5!UBERON:0011138;9.48e-08;5!UBERON:0001130;9.48e-08;5!UBERON:0001066;9.48e-08;5!UBERON:0001468;9.48e-08;5!UBERON:0000488;1.42e-07;4!UBERON:0000349;3.59e-07;5!UBERON:0007023;4.12e-07;114!UBERON:0001872;4.89e-07;5!UBERON:0002021;7.77e-07;5!UBERON:0007625;9.34e-07;11!UBERON:0004905;9.81e-07;8!UBERON:0000982;9.81e-07;8!UBERON:0004770;9.81e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.64e-77,89;UBERON:0001017,1.85e-75,81;UBERON:0000955,9.66e-65,68;UBERON:0006238,9.66e-65,68;UBERON:0001049,1.12e-62,56;UBERON:0005068,1.12e-62,56;UBERON:0006241,1.12e-62,56;UBERON:0007135,1.12e-62,56;UBERON:0000073,5.79e-58,53;UBERON:0002616,5.79e-58,53;UBERON:0003075,3.89e-56,82;UBERON:0007284,3.89e-56,82;UBERON:0002346,1.32e-52,86;UBERON:0010371,5.48e-51,104;UBERON:0004121,5.07e-50,171;UBERON:0000924,5.07e-50,171;UBERON:0006601,5.07e-50,171;UBERON:0003056,1.92e-40,61;UBERON:0002780,6.56e-40,41;UBERON:0001890,6.56e-40,41;UBERON:0003080,6.56e-40,41;UBERON:0006240,6.56e-40,41;UBERON:0010314,4.35e-37,132;UBERON:0003528,5.86e-36,34;UBERON:0002020,5.86e-36,34;UBERON:0001893,5.94e-36,34;UBERON:0001869,1.44e-33,32;UBERON:0002791,1.56e-33,32;UBERON:0011216,2.41e-25,223;UBERON:0000956,3.29e-25,25;UBERON:0000203,3.29e-25,25;UBERON:0003076,7.10e-24,15;UBERON:0003057,7.10e-24,15;UBERON:0002619,5.40e-22,22;UBERON:0004732,1.04e-20,13;UBERON:0001950,1.33e-19,20;UBERON:0004733,2.39e-19,12;UBERON:0002028,2.39e-19,12;UBERON:0007277,2.39e-19,12;UBERON:0007023,3.45e-19,114;UBERON:0002680,5.44e-15,9;UBERON:0001895,5.44e-15,9;UBERON:0010092,5.44e-15,9;UBERON:0000119,5.85e-13,309;UBERON:0000125,3.33e-12,9;UBERON:0002308,3.33e-12,9;UBERON:0002420,6.07e-12,9;UBERON:0007245,6.07e-12,9;UBERON:0010009,6.07e-12,9;UBERON:0010011,6.07e-12,9;UBERON:0000454,6.07e-12,9;UBERON:0006876,1.01e-11,11;UBERON:0000483,2.70e-11,306;UBERON:0002037,2.84e-11,6;UBERON:0006215,2.84e-11,6;UBERON:0009663,7.64e-10,7;UBERON:0002298,9.00e-10,6;UBERON:0005284,6.16e-09,5;UBERON:0002073,1.13e-08,5;UBERON:0005086,1.13e-08,5;UBERON:0000025,1.77e-08,192;UBERON:0005085,2.87e-08,31;UBERON:0011135,8.55e-08,5;UBERON:0002216,8.55e-08,5;UBERON:0011134,8.55e-08,5;UBERON:0002209,8.55e-08,5;UBERON:0002213,8.55e-08,5;UBERON:0005856,8.55e-08,5;UBERON:0005866,8.55e-08,5;UBERON:0005863,8.55e-08,5;UBERON:0007844,8.55e-08,5;UBERON:0011138,8.55e-08,5;UBERON:0001130,8.55e-08,5;UBERON:0001066,8.55e-08,5;UBERON:0001468,8.55e-08,5;UBERON:0000488,1.36e-07,4;UBERON:0000349,2.94e-07,5;UBERON:0001872,4.37e-07,5;UBERON:0002021,7.21e-07,5;UBERON:0004905,9.06e-07,8;UBERON:0000982,9.06e-07,8;UBERON:0004770,9.06e-07,8;UBERON:0007625,9.52e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,5.81701858912219,8.28493439319789,0,0,0,0,55.8969603668617,23.8680808755776,44.1971157284104,5.43848375549008,3.69560947696787,2.63639543149086,0,0,0,0,0,1.23852898652861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,37.3412527798068,16.8514342071549,25.9112617794722,0.72038491523742,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0.838998872419812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48485975847659,0,0,0,0.354668382198357,0.560677600142307,0,0,0,0,0,79.1599346582991,53.5843609766399,0.234321431833797,0.312160076830321,0,0,0.587172493218824,2.26622122115384,2.52811452064047,0,0,0.309977343527296,0,0,0,0,0,0,0,0,0,0,0,1.97328599257748,0.640672166455702,0.635795703478686,1.50045548042201,1.03052529238439,3.86460810068444,4.28068769562657,0,0,3.5340728394176,0.368199594569197,0.161646056818812,2.84007674013291,1.61203357164224,0,0,0,0,0.121973706129595,0.132529768321485,1.85910308591229,10.7807497215985,1.00928340350251,0,18.7739438795779,45.6701066116949,16.5761905622977,9.28735856063958,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77236972004421,0,0,15.7842385474644,0,0,0,0,0,0,8.6598805215164,33.9676086576975,4.22671299248958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,5.13217338068116,0,0,0,80.9586428973504,58.8546092924928,75.1717429664738,0,7.15312891703765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,0,5.70547620162874,0.289562613335158,0.410952645100767,3.22309733831812,0,0,0,0,24.6471785495789,2.60279707715243,4.63973287666617,2.84777651068393,11.4828975297569,0,0,0,9.69262784581205,6.00204625271613,4.88277042659524,0,0,0,0,0,0,2.0694614258501,0,0.368738337083406,0,140.193628743322,113.923616705204,0,0,0,0,0,0.30239029332968,0,0.153461973288062,0.280660094433074,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0.915694648183434,0.577566499444116,1.72279661398852,0,0,0.193341436584244,0.770243085573222,1.07452572308291,1.10269257987624,0,0,1.44885266607372,0.267096106940212,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,40.1931038908441,16.7681095100925,4.5751246541718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,1.239293992399,0,0,0,0,0,0.211107635297664,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07875276582847,0,6.95903353436409,1.96937182974718,0,0,0,0.996239941255349,0,0,0.306806047506464,0,0,0,0,0,0,0,0,8.72399471485697,6.02992638052033,0,0,0,0,0,0,0.236387681767936,0,0.874813840149763,0,5.31444831488303,3.61789315876224,225.820969749283,148.95026312736,203.336761840041,22.5966959068592,0,0,0,0,0.69169171316418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0,0,0,0,7.14452009595177,0,9.60484227473891,0,0,0,0,0,15.3036380815245,31.4037300753585,0,0,0,0,0,0,0,0,0,0,0,0,1.54787429224455,0,0,0,0.0969890164884194,0.0882561266915003,8.3612874088797,0,0.397429223405979,3.41878298161745,0.195551382734803,0,0,0,0,0,0,0,0,0,9.92100704337382,8.78663909023599,0.101998217636322,0.577901179803038,12.6088260629056,4.65478288232776,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,11.1332156573302,3.94989877723569,0,0,0,0,0,1.70098758642469,0,0.157611414598396,0,0,0,0,0,0,0,0,0,0,0,0,3.40776043570843,0,0,0,12.2818808543473,3.04134984008187,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0,0,0.471162288750703,8.86068179966986,0.366078794705889,5.38321002037949,37.2715977198546,21.2983778950756,11.1152561265076,13.4198175888144,0,0,0.285465333544967,0,0,0.724605143054126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,1.03018711554838,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35039341457942,0,0,0,0,0,0,0,0,0,0,2.94569520402945,0,5.59869534029676,0,19.4084660514027,1.41539347670307,0,0,0,0,0,0,0,0,0,0,4.43181653165571,4.25089728976755,2.87340946302872,2.66651273512982,5.79764901309952,3.31954811828246,9.04263615538366,11.4215536207324,0,0,0,0,0,0,0.397832444232549,0,0,0,0,0,0,4.52501816943244,3.90539049306924,3.9270491335225,2.7902956485319,12.0334457984008,0,0.496211178389294,0,0,6.96412386641773,13.451348888753,0.606965604236632,0,0,0,0,15.2931899197871,3.28863867814245,0,0,0,9.58405098487612,0,0.913158720509496,0,0,5.36074081324923,0,1.3948971044175,60.5026787612976,0,0,0,0,0,1.41998400876678,1.19298766662821,0,0,0,0,0,0,0,0.647428837187895,0.718639647993729,2.3196288626764,0.485710993059139,0,0,0.475680363110274,0.22589216407792,0.109940516745429,0,0,0,0,0,0,23.1643991195635,13.664134415046,76.5006866925954,0,0,0.128915775947154,0,0.178553938605658,0,0,0,0,4.01350832824064,53.6423311456828,4.48743835260037,6.98161104544604,5.290268405154,0,0.462175628631418,0,1.00933139868063,0,0,0,0.26721740526556,0.459474497674225,0,0,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| ||
|short_description=p2@ZIC1 | |||
}} | }} |
Latest revision as of 18:48, 15 September 2015
Short description: | p2@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZIC1_5end |
Coexpression cluster: | C711_cerebellum_Pericytes_Fibroblast_Meningeal_spinal_Astrocyte_Hair |
Association with transcript: | 0bp_to_NM_003412, uc003ewe.2_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 4.72e-13 | 59 |
ectodermal cell | 4.37e-12 | 72 |
neural cell | 1.71e-10 | 25 |
migratory neural crest cell | 7.23e-09 | 41 |
glial cell (sensu Vertebrata) | 1.05e-08 | 15 |
glial cell | 1.05e-08 | 15 |
glioblast | 1.05e-08 | 15 |
glioblast (sensu Vertebrata) | 1.05e-08 | 15 |
hair follicle cell | 1.13e-08 | 5 |
oligodendrocyte | 6.54e-08 | 7 |
macroglial cell | 6.54e-08 | 7 |
astrocyte | 6.54e-08 | 7 |
oligodendrocyte precursor cell | 6.54e-08 | 7 |
neuron associated cell | 1.64e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 1.64e-07 | 17 |