FFCP PHASE1:Hg19::chr3:156009623..156009647,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:156009623..156009647,+ to FFCP PHASE1:Hg19::chr3:156009623..156009647,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7881 | |EntrezGene=7881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6228 | |HGNC=6228 | ||
|TSSclassifier=strong | |||
|UniProt=F8W6W4 | |UniProt=F8W6W4 | ||
|association_with_transcript=-49bp_to_ENST00000389634_5end | |||
|cluster_id=chr3:156009623..156009647,+ | |||
|description=CAGE_peak_2_at_KCNAB1_5end | |||
|id=chr3:156009623..156009647,+ | |||
|ontology_enrichment_celltype=CL:0000359!4.31e-11!32;CL:0000192!8.09e-07!42;CL:0000514!8.09e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000359;2.88e-10;32!CL:0002494;3.56e-08;16!CL:0000569;5.08e-08;4!CL:0002595;6.06e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,1.42e-10,32;CL:0002494,2.88e-08,16;CL:0000569,4.23e-08,4;CL:0000011,4.23e-08,4;CL:0002595,5.90e-07,5;CL:0000192,7.08e-07,43;CL:0000514,7.08e-07,43 | |||
|ontology_enrichment_development_v019=CL:0000011;5.08e-08;4 | |||
|ontology_enrichment_disease=DOID:2394!2.91e-10!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;8.94e-13;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.02e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.47e-37!115;UBERON:0000025!1.42e-32!194;UBERON:0004111!2.20e-30!241;UBERON:0001049!6.97e-26!57;UBERON:0005068!6.97e-26!57;UBERON:0006241!6.97e-26!57;UBERON:0007135!6.97e-26!57;UBERON:0000477!1.96e-25!286;UBERON:0002780!1.17e-23!41;UBERON:0001890!1.17e-23!41;UBERON:0006240!1.17e-23!41;UBERON:0001637!1.44e-23!42;UBERON:0003509!1.44e-23!42;UBERON:0004572!1.44e-23!42;UBERON:0004872!8.28e-23!84;UBERON:0003080!8.52e-23!42;UBERON:0001893!3.92e-22!34;UBERON:0002020!1.68e-21!34;UBERON:0003528!1.68e-21!34;UBERON:0002791!2.90e-21!33;UBERON:0002616!5.97e-21!59;UBERON:0001869!9.08e-21!32;UBERON:0000955!2.92e-20!69;UBERON:0006238!2.92e-20!69;UBERON:0005743!4.12e-20!86;UBERON:0003075!7.73e-20!86;UBERON:0007284!7.73e-20!86;UBERON:0001017!8.13e-20!82;UBERON:0001981!1.60e-19!60;UBERON:0007500!1.60e-19!60;UBERON:0004537!1.60e-19!60;UBERON:0006965!1.60e-19!60;UBERON:0000055!2.27e-19!69;UBERON:0000073!4.69e-19!94;UBERON:0001016!4.69e-19!94;UBERON:0002346!6.33e-19!90;UBERON:0004573!1.96e-18!33;UBERON:0004571!1.96e-18!33;UBERON:0002619!2.22e-17!22;UBERON:0001950!1.04e-15!20;UBERON:0002049!1.18e-15!79;UBERON:0007798!1.18e-15!79;UBERON:0000483!3.77e-15!309;UBERON:0001009!6.16e-15!113;UBERON:0000119!1.11e-14!312;UBERON:0003056!1.24e-14!61;UBERON:0000956!1.80e-14!25;UBERON:0000203!1.80e-14!25;UBERON:0004535!1.94e-14!110;UBERON:0003914!1.52e-13!118;UBERON:0000947!2.09e-12!21;UBERON:0010191!2.09e-12!21;UBERON:0000153!2.93e-12!129;UBERON:0007811!2.93e-12!129;UBERON:0000033!1.25e-11!123;UBERON:0000467!1.80e-09!625;UBERON:0002420!2.08e-09!9;UBERON:0007245!2.08e-09!9;UBERON:0010009!2.08e-09!9;UBERON:0010011!2.08e-09!9;UBERON:0000454!2.08e-09!9;UBERON:0000480!2.23e-09!626;UBERON:0000481!7.00e-09!347;UBERON:0000468!7.05e-09!659;UBERON:0002308!1.01e-08!9;UBERON:0000125!1.01e-08!9;UBERON:0000922!1.07e-08!612;UBERON:0002050!2.29e-08!605;UBERON:0005423!2.29e-08!605;UBERON:0000923!4.24e-08!604;UBERON:0005291!4.24e-08!604;UBERON:0006598!4.24e-08!604;UBERON:0002532!4.24e-08!604;UBERON:0004121!4.69e-08!169;UBERON:0007100!5.13e-08!27;UBERON:0009663!6.99e-08!7;UBERON:0000924!7.56e-08!173;UBERON:0006601!7.56e-08!173;UBERON:0000948!1.28e-07!24;UBERON:0005498!1.28e-07!24;UBERON:0004140!1.28e-07!24;UBERON:0009881!1.28e-07!24;UBERON:0004141!1.28e-07!24;UBERON:0003084!1.28e-07!24;UBERON:0007005!1.28e-07!24;UBERON:0004139!1.28e-07!24;UBERON:0004291!1.28e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.04e-24;32!UBERON:0001893;6.35e-24;34!UBERON:0002791;7.72e-23;32!UBERON:0003528;7.02e-21;34!UBERON:0002020;7.02e-21;34!UBERON:0002619;1.88e-20;22!UBERON:0002780;2.85e-19;41!UBERON:0001890;2.85e-19;41!UBERON:0001950;8.81e-18;20!UBERON:0000956;1.64e-17;25!UBERON:0000203;1.64e-17;25!UBERON:0001637;4.51e-15;42!UBERON:0003509;4.51e-15;42!UBERON:0004572;4.51e-15;42!UBERON:0000073;1.29e-13;53!UBERON:0002616;1.29e-13;53!UBERON:0004573;5.67e-13;33!UBERON:0004571;5.67e-13;33!UBERON:0000955;1.62e-10;68!UBERON:0000200;4.35e-10;6!UBERON:0002118;5.71e-10;5!UBERON:0002420;9.78e-10;9!UBERON:0007245;9.78e-10;9!UBERON:0010009;9.78e-10;9!UBERON:0010011;9.78e-10;9!UBERON:0000454;9.78e-10;9!UBERON:0009663;1.13e-09;7!UBERON:0000947;5.51e-09;21!UBERON:0010191;5.51e-09;21!UBERON:0000992;1.05e-08;13!UBERON:0007500;1.13e-08;56!UBERON:0001981;1.13e-08;56!UBERON:0004537;1.13e-08;56!UBERON:0001017;1.24e-08;75!UBERON:0000369;1.80e-08;4!UBERON:0002435;1.80e-08;4!UBERON:0000204;1.80e-08;4!UBERON:0000055;3.56e-08;65!UBERON:0000125;2.55e-07;9!UBERON:0002308;2.55e-07;9!UBERON:0003834;6.06e-07;5!UBERON:0001533;6.06e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000025,4.55e-29,192;UBERON:0001893,1.17e-27,34;UBERON:0001869,1.79e-27,32;UBERON:0002780,4.21e-26,41;UBERON:0001890,4.21e-26,41;UBERON:0003080,4.21e-26,41;UBERON:0006240,4.21e-26,41;UBERON:0002791,4.73e-25,32;UBERON:0003528,3.28e-23,34;UBERON:0002020,3.28e-23,34;UBERON:0000073,4.91e-23,53;UBERON:0002616,4.91e-23,53;UBERON:0001049,5.55e-23,56;UBERON:0005068,5.55e-23,56;UBERON:0006241,5.55e-23,56;UBERON:0007135,5.55e-23,56;UBERON:0004111,5.79e-23,240;UBERON:0004872,1.26e-21,83;UBERON:0002619,2.92e-20,22;UBERON:0010314,2.79e-19,132;UBERON:0001637,6.41e-19,42;UBERON:0003509,6.41e-19,42;UBERON:0004572,6.41e-19,42;UBERON:0000955,2.15e-18,68;UBERON:0006238,2.15e-18,68;UBERON:0003056,7.15e-18,61;UBERON:0003075,1.10e-17,82;UBERON:0007284,1.10e-17,82;UBERON:0001950,1.45e-17,20;UBERON:0000055,2.37e-17,68;UBERON:0000956,2.41e-17,25;UBERON:0000203,2.41e-17,25;UBERON:0007500,7.20e-17,59;UBERON:0001981,7.20e-17,59;UBERON:0004537,7.20e-17,59;UBERON:0006965,7.20e-17,59;UBERON:0007023,1.38e-16,114;UBERON:0002346,2.07e-16,86;UBERON:0001017,3.52e-15,81;UBERON:0004535,6.10e-15,109;UBERON:0000483,7.14e-15,306;UBERON:0004573,7.82e-15,33;UBERON:0004571,7.82e-15,33;UBERON:0000119,1.53e-14,309;UBERON:0001009,2.97e-14,112;UBERON:0002049,5.27e-14,78;UBERON:0007798,5.27e-14,78;UBERON:0001016,8.93e-14,89;UBERON:0003914,3.35e-13,117;UBERON:0010371,6.10e-12,104;UBERON:0000200,4.26e-10,6;UBERON:0002118,6.74e-10,5;UBERON:0002420,8.92e-10,9;UBERON:0007245,8.92e-10,9;UBERON:0010009,8.92e-10,9;UBERON:0010011,8.92e-10,9;UBERON:0000454,8.92e-10,9;UBERON:0009663,1.17e-09,7;UBERON:0000947,4.37e-09,21;UBERON:0010191,4.37e-09,21;UBERON:0000992,1.19e-08,13;UBERON:0000369,1.99e-08,4;UBERON:0002435,1.99e-08,4;UBERON:0000204,1.99e-08,4;UBERON:0010082,1.99e-08,4;UBERON:0000948,2.26e-07,24;UBERON:0005498,2.26e-07,24;UBERON:0004140,2.26e-07,24;UBERON:0009881,2.26e-07,24;UBERON:0004141,2.26e-07,24;UBERON:0003084,2.26e-07,24;UBERON:0007005,2.26e-07,24;UBERON:0004139,2.26e-07,24;UBERON:0004291,2.26e-07,24;UBERON:0000125,2.60e-07,9;UBERON:0002308,2.60e-07,9;UBERON:0000923,2.75e-07,560;UBERON:0010316,2.75e-07,560;UBERON:0005291,2.75e-07,560;UBERON:0006598,2.75e-07,560;UBERON:0010317,2.75e-07,560;UBERON:0002532,2.75e-07,560;UBERON:0000922,4.40e-07,592;UBERON:0002050,4.43e-07,564;UBERON:0003834,5.90e-07,5;UBERON:0001533,5.90e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.842079540005,21.0943084808392,25.5608531635581,19.0293791528298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0.087834785693126,0.458426764241994,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,11.3061588384802,19.2969740656557,31.0883387392276,0.208994966536811,0.258416759169329,8.18262404179434,1.00416183829401,0,0,0,0.735326160691737,4.86085168729056,0,0,0,10.7321646226118,0,25.648244150257,0,0,0,0,0.25326102332916,1.32409180813219,5.73673241497627,1.41867352879343,10.6528744027038,0,11.1000396787722,1.55605517699883,0.134710672069688,3.59616186849609,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,0,0,0,0,0,0,0,0,0,0.340296549480063,0.358779271377724,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,1.58803092537181,0,0,0,0,0,0,0.445893486866185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,17.7849232465156,0,5.99837947092342,1.2162378064119,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0.321707842287215,0,0,0.710246901252508,0.0821271560138091,2.59627214591811,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57196781080683,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0.464845549297286,0,0.6970372701606,0.924100740528266,2.66153015158511,0,2.03856641014312,0,0,0,0,0,0,0.318203247925937,6.27958912159384,0,0,0,4.65019707618627,0,0.421258456238981,0,0.243713489631284,7.39551027297288,0,0,11.3008116620243,4.96228809191512,15.2590964305481,9.64591947558278,0,0,0.202910376962704,1.54911749049875,5.91560765317707,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,2.67060177818683,0,0,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98244294329889,0.984685914873589,6.67852230137435,0,0,1.79323189425963,1.10513566212459,0,0,0,0,0,0,0,0.295930216910801,0,0,2.90799823828566,1.94813006139888,0,0,0,0,0,0,0,0,0,0,7.97167247232455,3.0149109656352,0,0.110579259931225,1.18219047581419,0.87754158861589,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,1.28062152663286,0.802577647298789,12.1817511777176,0,0,0,0.789168805698781,0,0.30607276163049,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0.387956065953678,0,2.71176888936639,0,0,4.55837730882327,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,7.80546375322726,1.36905378891993,0,0,0,0.558564802544508,1.14580212005842,0,0.199679000498991,0.858452096273142,0,0.470284307407084,0.360299883542404,0,0,0,0,0,0,3.18091875923721,1.49823746722733,0,0,0,0,0,4.25246896606173,0,0,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0.340776043570843,0,0.146552233678082,2.65013777824443,0.517131825446202,0.26446520348538,0,0,0.213574825135389,0.314408610199332,0.828478110694391,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,1.31149052283922,0,2.65820453990096,2.56255156294123,1.251909307065,1.14681839138014,1.10929051536852,0.869349641179368,0.415045904808692,0.124980407962107,0,0,0,0,0,0,0,0,0,0,0,1.37304041038154,9.07385542579434,16.4763432617747,2.95710299979268,4.77890301491107,0.449803112163605,4.03683687878274,38.5676773291996,22.0648623083136,0,0.751288044986092,7.61610424337591,20.7504073934377,11.0927682113561,3.54454838240212,7.4245401580559,1.19428766609585,0,0,0.673498977531838,0,0,0,0,0,0,0,0,0,0,14.4885099675622,0,3.88567613502067,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0.436838552768056,0,0,0,0,0,0,0,0,0,10.4693636907229,1.41696576325585,0.319267718114302,2.05116364240755,1.00828678488687,3.04291910842559,1.61475645631851,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,2.83657855397258,3.90539049306924,1.03343398250592,3.29762213008315,0.546974809018219,0.548257766857182,1.48863353516788,0.175871244359621,0,0,0.336283722218824,0.606965604236632,0.227662191351298,0.975726071789027,0,0,0.40781839786099,3.6175025459567,0,0,0.863424021355654,5.65616123697607,0,0,0,0,8.43423221284545,0,0,0,0,0,0,0,0.430227358820278,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.385870790539723,0.437119121007915,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.6906229103336,0,1.03382309777839,2.2560260790752,0,0,0,0,1.46067277649303,0.458729283404541,0.716697915757256,0,2.24371917630019,0.436350690340377,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.682008283964155,0,0,3.41328886344254,2.77204176471275,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| ||
|short_description=p2@KCNAB1 | |||
}} | }} |
Latest revision as of 06:11, 16 September 2015
Short description: | p2@KCNAB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCNAB1_5end |
Coexpression cluster: | NA |
Association with transcript: | -49bp_to_ENST00000389634_5end |
EntrezGene: | KCNAB1 |
HGNC: | 6228 |
UniProt: | F8W6W4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 1.42e-10 | 32 |
cardiocyte | 2.88e-08 | 16 |
cardiac mesenchymal cell | 4.23e-08 | 4 |
migratory trunk neural crest cell | 4.23e-08 | 4 |
smooth muscle cell of the subclavian artery | 5.90e-07 | 5 |
smooth muscle cell | 7.08e-07 | 43 |
smooth muscle myoblast | 7.08e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.02e-12 | 14 |