FFCP PHASE1:Hg19::chr5:146258291..146258364,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr5:146258291..146258364,- to FFCP PHASE1:Hg19::chr5:146258291..146258364,-: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5521 | |EntrezGene=5521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9305 | |HGNC=9305 | ||
|TSSclassifier=strong | |||
|UniProt=Q00005,E9PCT7 | |UniProt=Q00005,E9PCT7 | ||
|association_with_transcript=0bp_to_ENST00000394411,ENST00000532154,NM_181675,uc003log.3_5end | |||
|cluster_id=chr5:146258291..146258364,- | |||
|coexpression_cluster_id=C4475 | |||
|description=CAGE_peak_1_at_PPP2R2B_5end | |||
|id=chr5:146258291..146258364,- | |||
|ontology_enrichment_celltype=CL:0000791!1.03e-08!18;CL:0000789!1.03e-08!18;CL:0002420!1.03e-08!18;CL:0002419!1.03e-08!18;CL:0000790!1.03e-08!18;CL:0000084!8.72e-07!25;CL:0000827!8.72e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000791;1.86e-10;18!CL:0000789;1.86e-10;18!CL:0002419;1.86e-10;18!CL:0000084;7.48e-09;25!CL:0002319;1.48e-07;25!CL:0000625;2.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,1.95e-10,18;CL:0000789,1.95e-10,18;CL:0002420,1.95e-10,18;CL:0002419,1.95e-10,18;CL:0000790,1.95e-10,18;CL:0000084,7.73e-09,25;CL:0000827,7.73e-09,25;CL:0002319,1.37e-07,25;CL:0000047,1.68e-07,8;CL:0000625,2.31e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.86e-10;18!UBERON:0006601;3.33e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!2.25e-40!86;UBERON:0001017!2.98e-38!82;UBERON:0000073!9.74e-37!94;UBERON:0001016!9.74e-37!94;UBERON:0007023!1.34e-32!115;UBERON:0001049!7.50e-32!57;UBERON:0005068!7.50e-32!57;UBERON:0006241!7.50e-32!57;UBERON:0007135!7.50e-32!57;UBERON:0000955!9.44e-31!69;UBERON:0006238!9.44e-31!69;UBERON:0003075!9.53e-31!86;UBERON:0007284!9.53e-31!86;UBERON:0002346!9.33e-29!90;UBERON:0002616!6.30e-27!59;UBERON:0003056!9.13e-27!61;UBERON:0002780!2.33e-26!41;UBERON:0001890!2.33e-26!41;UBERON:0006240!2.33e-26!41;UBERON:0003080!3.81e-26!42;UBERON:0001893!2.52e-22!34;UBERON:0002020!3.06e-22!34;UBERON:0003528!3.06e-22!34;UBERON:0001869!8.22e-22!32;UBERON:0002791!1.35e-21!33;UBERON:0000153!6.32e-20!129;UBERON:0007811!6.32e-20!129;UBERON:0000033!1.23e-18!123;UBERON:0004121!1.24e-18!169;UBERON:0000924!7.78e-18!173;UBERON:0006601!7.78e-18!173;UBERON:0000956!3.56e-17!25;UBERON:0000203!3.56e-17!25;UBERON:0002619!1.89e-16!22;UBERON:0001950!2.72e-15!20;UBERON:0000064!1.27e-10!219;UBERON:0003076!4.89e-07!15;UBERON:0003057!4.89e-07!15;UBERON:0002420!9.27e-07!9;UBERON:0007245!9.27e-07!9;UBERON:0010009!9.27e-07!9;UBERON:0010011!9.27e-07!9;UBERON:0000454!9.27e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;3.04e-24;32!UBERON:0001893;1.02e-23;34!UBERON:0002791;1.06e-23;32!UBERON:0003528;1.24e-23;34!UBERON:0002020;1.24e-23;34!UBERON:0002780;2.83e-23;41!UBERON:0001890;2.83e-23;41!UBERON:0000073;4.73e-21;53!UBERON:0002616;4.73e-21;53!UBERON:0000956;5.87e-21;25!UBERON:0000203;5.87e-21;25!UBERON:0002619;5.00e-20;22!UBERON:0001950;1.39e-18;20!UBERON:0000955;1.23e-17;68!UBERON:0001017;1.45e-17;75!UBERON:0001016;9.29e-15;83!UBERON:0007023;8.98e-09;114!UBERON:0002420;4.94e-08;9!UBERON:0007245;4.94e-08;9!UBERON:0010009;4.94e-08;9!UBERON:0010011;4.94e-08;9!UBERON:0000454;4.94e-08;9!UBERON:0000125;9.63e-08;9!UBERON:0002308;9.63e-08;9!UBERON:0001737;7.12e-07;9!UBERON:0001557;7.12e-07;9!UBERON:0001871;9.67e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.29e-47,81;UBERON:0001016,1.33e-43,89;UBERON:0001049,1.62e-38,56;UBERON:0005068,1.62e-38,56;UBERON:0006241,1.62e-38,56;UBERON:0007135,1.62e-38,56;UBERON:0000955,1.74e-37,68;UBERON:0006238,1.74e-37,68;UBERON:0003075,6.22e-37,82;UBERON:0007284,6.22e-37,82;UBERON:0000073,9.73e-37,53;UBERON:0002616,9.73e-37,53;UBERON:0002346,9.03e-34,86;UBERON:0003056,4.68e-33,61;UBERON:0002780,2.36e-32,41;UBERON:0001890,2.36e-32,41;UBERON:0003080,2.36e-32,41;UBERON:0006240,2.36e-32,41;UBERON:0007023,2.79e-31,114;UBERON:0001893,2.46e-27,34;UBERON:0003528,3.12e-27,34;UBERON:0002020,3.12e-27,34;UBERON:0001869,1.07e-26,32;UBERON:0002791,5.68e-26,32;UBERON:0010371,1.64e-23,104;UBERON:0004121,4.05e-23,171;UBERON:0000924,4.05e-23,171;UBERON:0006601,4.05e-23,171;UBERON:0011216,5.17e-22,223;UBERON:0000956,6.17e-21,25;UBERON:0000203,6.17e-21,25;UBERON:0002619,4.92e-20,22;UBERON:0001950,1.35e-18,20;UBERON:0010314,1.01e-17,132;UBERON:0002420,5.12e-08,9;UBERON:0007245,5.12e-08,9;UBERON:0010009,5.12e-08,9;UBERON:0010011,5.12e-08,9;UBERON:0000454,5.12e-08,9;UBERON:0000125,1.01e-07,9;UBERON:0002308,1.01e-07,9;UBERON:0003076,1.16e-07,15;UBERON:0003057,1.16e-07,15;UBERON:0001737,7.15e-07,9;UBERON:0001871,9.42e-07,6 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,2.53299878168311,0.631719873426831,0,0,0,0,0,0,0,0,0,0.730310090387373,0,2.70866327768933,0.612002073732759,1.56727360739044,6.5834277040143,6.29622355335267,3.26410862946487,0,0,0,5.50709987588466,37.2314516154296,6.03782880932696,0,0,0,0,0,0.293600439334847,4.43196326825502,8.62341124121609,6.94434786290726,0.223915474239924,3.2389366601898,1.80302897343931,0.290796477559129,0,0.242584061187816,0.697287110717054,0,0.309706370895104,0,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.188242339542605,0,0.224723484445085,0.306083892370903,0.641858054152187,0,1.64925650093358,0.398927315243264,0.426224750532694,0.580418477257168,0,0,1.00499466102697,0.521482918420201,0.65156653411535,4.84319602106695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,3.92355994087075,0.263384084775077,5.70458333330116,9.43225830597995,4.11202997999018,0,2.28145586643513,2.36723902867367,3.89653456815823,1.44833593950726,12.668054021418,4.65221178625604,20.0394859186112,0.128091319725675,2.73124629875744,0,0,0,0.14828656316206,0.267540828089713,1.04535523804977,0.566546713487831,12.2630557952615,2.40539211837841,13.9160830610727,7.00843911513013,7.81300144627702,10.4549724889321,5.87242964403314,6.52731716887534,4.99722906209383,8.52398107358461,10.6746639599736,35.2811800643282,52.9531587651345,25.7787438911382,2.43806866313962,0,0,0,0,5.35932120155048,0.795285947051099,0,12.7622003171492,10.1995522832779,17.5669571386252,8.8410875960956,0,0.370784442784429,0.97364218096405,1.39303789839414,0.398873881556595,0.476981248610684,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.709336764396714,1.68203280042692,0,0.49333509683432,0,0.269421344139376,0,1.36221684880438,0.576175924479999,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0.423863802319124,0,0,1.8034837803194,3.53622027030021,0.506328996723799,0,0,0,2.42469085228218,0.355009592516614,0.302256294682921,0,0,0,0.286804595389004,43.422639382136,77.3973846997474,36.8334798896373,19.9029225629511,44.6607906049862,20.4387321082465,0,0,0,0,0,14.0785092047414,18.5443159085912,13.7376287033585,14.558804400676,17.4303555273925,10.6771778599993,12.9438055833758,16.4826030705291,14.6203919639628,0,0,0,0,0,0,1.18157981336281,0,0.614942192715568,9.95093299731448,0.219500570817251,0,0.100528972411631,0,1.3032332212413,0,7.21656710126366,14.7231614318348,6.69229557144183,0,0,0,0.790204397959275,1.71697232418975,0,0.468008530278475,0,0,0.16798212819886,0,0,0.290633938513962,0,0,0.088048434013226,1.24396869324463,0.144119953416961,0.6312121671319,0.063497894292169,0,0,1.71072446022705,0,0,0,0.112131084345361,0,0.07333828582095,1.55126058909333,0,0,1.32969058292435,2.08014873822732,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,1.42636905040718,0,2.87666851570537,0.179060963239896,20.8478367827961,39.6031828005874,48.7318319182509,34.2675906866928,37.6060043849246,62.4671298516584,18.5589315066647,28.812797637508,25.5175500661265,0,0,0.414415513436035,0,0,0.271265023699736,0.207970861530807,0.356857977594324,0.788512075169673,1.17141414992713,0,0,4.1389228517002,0.664225598535437,0.921845842708516,0.0868836144680828,0,0,11.3722414367588,1.2942852049117,12.8073069364133,0,0,0.30239029332968,0,0.153461973288062,0,0,0,0,0,0.154209693802656,0,0,0,0,0.604297247958111,0.40101294060657,0.644566922551274,0.574072240823034,0,0.524497659837696,0,1.30926073077505,2.35304930753057,0,0.527758144464379,0,0,2.37507507712353,1.54227252690289,2.98041081298238,1.00337954770971,2.54876273045038,1.66215201785745,1.56712328305525,0,0.261435451024901,21.5418105097767,6.88830755969382,7.80908147194327,1.75169719801128,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0.330569830721956,0.384380134730212,0.382838137483752,0.50578890427775,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0.818999468447914,0.141405431953713,0,0,0,0,0,0,0,1.54911749049875,0,2.43799298746888,0.0982490410131212,0,0.354761064070598,1.68886108238131,0,0.379473173765715,0,0.0962221127255121,0.670302275535787,0,2.16530741786592,0.43050537267123,1.68471475667626,0.443430153536676,0.918893600827838,2.02979043692868,3.82318603571188,1.70894156152249,2.85878130549347,3.29089818468955,1.29694662238543,2.70015718619057,1.58625035258854,0,0,0.980160863924127,0,0,0,3.34795172730527,14.5692941145956,0,0,0,0,0,0.313359791546046,2.50634477090067,0,0,0.201799707191048,0,0,0,0,0,1.56310476321632,0,0,0,0,0,0,0.879049075631364,0,0,8.80822055099881,11.9372242368845,14.2543046799667,17.5081600196562,35.7893153195867,31.0879410267233,0,17.9636222907168,0.63337622438398,14.5451031423281,1.10513566212459,6.55025144421118,9.81779352020686,0,0,0,0.179021174675609,0,9.46976694114563,0,0,47.4973045586657,45.0852957066597,27.9459317201672,0.260427761085233,0,0.724999575434793,0,0,6.85524277127015,7.5843542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| ||
|short_description=p1@PPP2R2B | |||
}} | }} |
Latest revision as of 21:11, 15 September 2015
Short description: | p1@PPP2R2B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PPP2R2B_5end |
Coexpression cluster: | C4475_duodenum_parietal_H9_frontal_insula_immature_pons |
Association with transcript: | 0bp_to_ENST00000394411, ENST00000532154, NM_181675, uc003log.3_5end |
EntrezGene: | PPP2R2B |
HGNC: | 9305 |
UniProt: | Q00005E9PCT7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 1.95e-10 | 18 |
alpha-beta T cell | 1.95e-10 | 18 |
immature T cell | 1.95e-10 | 18 |
mature T cell | 1.95e-10 | 18 |
immature alpha-beta T cell | 1.95e-10 | 18 |
T cell | 7.73e-09 | 25 |
pro-T cell | 7.73e-09 | 25 |
neural cell | 1.37e-07 | 25 |
neuronal stem cell | 1.68e-07 | 8 |
CD8-positive, alpha-beta T cell | 2.31e-07 | 11 |