FFCP PHASE1:Hg19::chr7:30008849..30008863,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:30008849..30008863,- to FFCP PHASE1:Hg19::chr7:30008849..30008863,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9805 | |EntrezGene=9805 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22192 | |HGNC=22192 | ||
|TSSclassifier=strong | |||
|UniProt=Q12765 | |UniProt=Q12765 | ||
|association_with_transcript=23bp_to_ENST00000409497,uc010kvp.2_5end | |||
|cluster_id=chr7:30008849..30008863,- | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_8_at_SCRN1_5end | |||
|id=chr7:30008849..30008863,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.10e-28;3!UBERON:0006601;4.10e-12;82!UBERON:0006222;5.78e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.00e-97!57;UBERON:0005068!4.00e-97!57;UBERON:0006241!4.00e-97!57;UBERON:0007135!4.00e-97!57;UBERON:0001017!3.84e-89!82;UBERON:0005743!3.39e-88!86;UBERON:0002616!3.82e-84!59;UBERON:0000955!2.85e-81!69;UBERON:0006238!2.85e-81!69;UBERON:0000073!5.82e-79!94;UBERON:0001016!5.82e-79!94;UBERON:0002780!4.53e-72!41;UBERON:0001890!4.53e-72!41;UBERON:0006240!4.53e-72!41;UBERON:0003075!4.51e-71!86;UBERON:0007284!4.51e-71!86;UBERON:0001893!1.00e-70!34;UBERON:0002020!1.78e-70!34;UBERON:0003528!1.78e-70!34;UBERON:0003080!3.35e-70!42;UBERON:0002791!1.02e-67!33;UBERON:0002346!1.79e-67!90;UBERON:0001869!3.48e-64!32;UBERON:0003056!1.58e-52!61;UBERON:0007023!2.31e-51!115;UBERON:0002619!6.95e-50!22;UBERON:0000956!3.79e-48!25;UBERON:0000203!3.79e-48!25;UBERON:0000033!3.91e-46!123;UBERON:0001950!1.43e-43!20;UBERON:0000153!1.59e-43!129;UBERON:0007811!1.59e-43!129;UBERON:0004121!1.46e-39!169;UBERON:0000924!2.10e-38!173;UBERON:0006601!2.10e-38!173;UBERON:0003076!1.56e-26!15;UBERON:0003057!1.56e-26!15;UBERON:0002420!1.90e-24!9;UBERON:0007245!1.90e-24!9;UBERON:0010009!1.90e-24!9;UBERON:0010011!1.90e-24!9;UBERON:0000454!1.90e-24!9;UBERON:0002308!1.37e-23!9;UBERON:0000125!1.37e-23!9;UBERON:0004733!1.41e-22!12;UBERON:0002028!1.41e-22!12;UBERON:0007277!1.41e-22!12;UBERON:0000025!1.29e-21!194;UBERON:0001871!3.69e-21!7;UBERON:0004732!1.06e-20!13;UBERON:0002298!1.46e-20!8;UBERON:0000349!5.42e-18!5;UBERON:0009663!1.06e-17!7;UBERON:0004111!1.92e-15!241;UBERON:0000064!2.37e-14!219;UBERON:0000200!2.70e-14!6;UBERON:0002680!8.32e-14!9;UBERON:0001895!8.32e-14!9;UBERON:0010092!8.32e-14!9;UBERON:0000477!2.55e-12!286;UBERON:0000483!3.14e-12!309;UBERON:0000119!5.18e-12!312;UBERON:0001896!2.27e-11!3;UBERON:0005290!2.27e-11!3;UBERON:0010096!2.27e-11!3;UBERON:0002771!2.80e-11!3;UBERON:0001872!3.70e-11!5;UBERON:0006331!4.09e-11!3;UBERON:0000475!7.19e-11!365;UBERON:0000988!1.39e-10!3;UBERON:0002021!1.49e-10!5;UBERON:0001876!1.19e-08!2;UBERON:0001875!1.97e-08!2;UBERON:0006514!1.97e-08!2;UBERON:0001954!3.49e-08!2;UBERON:0003022!3.49e-08!2;UBERON:0002421!3.49e-08!2;UBERON:0002600!3.49e-08!2;UBERON:0000369!4.47e-08!4;UBERON:0002435!4.47e-08!4;UBERON:0000204!4.47e-08!4;UBERON:0010082!4.47e-08!4;UBERON:0000062!6.61e-08!511;UBERON:0002148!1.17e-07!2;UBERON:0009662!1.17e-07!2;UBERON:0000922!9.21e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;9.70e-41;53!UBERON:0002616;9.70e-41;53!UBERON:0002780;5.67e-30;41!UBERON:0001890;5.67e-30;41!UBERON:0004733;4.59e-26;12!UBERON:0002028;4.59e-26;12!UBERON:0002420;2.18e-24;9!UBERON:0007245;2.18e-24;9!UBERON:0010009;2.18e-24;9!UBERON:0010011;2.18e-24;9!UBERON:0000454;2.18e-24;9!UBERON:0004732;4.94e-24;13!UBERON:0001016;2.58e-23;83!UBERON:0001893;2.18e-22;34!UBERON:0003528;4.80e-22;34!UBERON:0002020;4.80e-22;34!UBERON:0002791;2.23e-21;32!UBERON:0000955;8.40e-21;68!UBERON:0001876;5.60e-19;2!UBERON:0001017;1.06e-18;75!UBERON:0001875;3.44e-18;2!UBERON:0006514;3.44e-18;2!UBERON:0002619;8.31e-18;22!UBERON:0001869;1.29e-17;32!UBERON:0000349;1.49e-16;5!UBERON:0002680;3.49e-16;9!UBERON:0001895;3.49e-16;9!UBERON:0000125;1.09e-15;9!UBERON:0002308;1.09e-15;9!UBERON:0000956;1.14e-15;25!UBERON:0000203;1.14e-15;25!UBERON:0001950;1.57e-14;20!UBERON:0002037;3.03e-14;6!UBERON:0002298;1.66e-13;6!UBERON:0007023;3.11e-13;114!UBERON:0001896;1.89e-12;3!UBERON:0001870;1.89e-12;3!UBERON:0005290;1.89e-12;3!UBERON:0009663;8.27e-12;7!UBERON:0001894;1.17e-11;7!UBERON:0002038;2.47e-10;1!UBERON:0009661;2.47e-10;1!UBERON:0002950;2.47e-10;1!UBERON:0001891;2.47e-10;1!UBERON:0002022;5.78e-10;1!UBERON:0002336;5.78e-10;1!UBERON:0011215;5.78e-10;1!UBERON:0001018;5.78e-10;1!UBERON:0002473;5.78e-10;1!UBERON:0005340;5.78e-10;1!UBERON:0003544;5.78e-10;1!UBERON:0005970;5.78e-10;1!UBERON:0002316;5.78e-10;1!UBERON:0001020;5.78e-10;1!UBERON:0002437;5.78e-10;1!UBERON:0002784;1.45e-09;4!UBERON:0011216;3.10e-08;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.28e-64,56;UBERON:0005068,4.28e-64,56;UBERON:0006241,4.28e-64,56;UBERON:0007135,4.28e-64,56;UBERON:0000073,2.33e-61,53;UBERON:0002616,2.33e-61,53;UBERON:0001017,5.06e-52,81;UBERON:0000955,1.44e-51,68;UBERON:0006238,1.44e-51,68;UBERON:0001016,1.24e-46,89;UBERON:0003075,4.48e-43,82;UBERON:0007284,4.48e-43,82;UBERON:0002346,5.92e-41,86;UBERON:0002780,4.75e-38,41;UBERON:0001890,4.75e-38,41;UBERON:0003080,4.75e-38,41;UBERON:0006240,4.75e-38,41;UBERON:0010371,2.10e-33,104;UBERON:0007023,1.83e-30,114;UBERON:0003528,2.21e-28,34;UBERON:0002020,2.21e-28,34;UBERON:0001893,2.40e-28,34;UBERON:0003076,4.94e-28,15;UBERON:0003057,4.94e-28,15;UBERON:0004733,3.88e-26,12;UBERON:0002028,3.88e-26,12;UBERON:0007277,3.88e-26,12;UBERON:0010314,1.04e-25,132;UBERON:0003056,4.90e-25,61;UBERON:0002791,5.91e-25,32;UBERON:0002420,1.56e-24,9;UBERON:0007245,1.56e-24,9;UBERON:0010009,1.56e-24,9;UBERON:0010011,1.56e-24,9;UBERON:0000454,1.56e-24,9;UBERON:0004732,4.23e-24,13;UBERON:0004121,3.69e-23,171;UBERON:0000924,3.69e-23,171;UBERON:0006601,3.69e-23,171;UBERON:0001869,3.81e-20,32;UBERON:0001876,5.37e-19,2;UBERON:0001875,1.87e-18,2;UBERON:0006514,1.87e-18,2;UBERON:0002619,6.70e-18,22;UBERON:0011216,5.58e-17,223;UBERON:0000025,1.04e-16,192;UBERON:0000349,1.12e-16,5;UBERON:0002680,3.50e-16,9;UBERON:0001895,3.50e-16,9;UBERON:0010092,3.50e-16,9;UBERON:0000125,8.50e-16,9;UBERON:0002308,8.50e-16,9;UBERON:0000956,9.39e-16,25;UBERON:0000203,9.39e-16,25;UBERON:0001950,1.45e-14,20;UBERON:0002037,3.03e-14,6;UBERON:0006215,3.03e-14,6;UBERON:0002298,1.40e-13,6;UBERON:0004111,1.02e-12,240;UBERON:0001870,1.41e-12,3;UBERON:0001896,1.50e-12,3;UBERON:0005290,1.50e-12,3;UBERON:0010096,1.50e-12,3;UBERON:0009663,6.52e-12,7;UBERON:0001894,1.31e-11,7;UBERON:0006222,1.31e-11,7;UBERON:0002038,2.59e-10,1;UBERON:0009661,2.59e-10,1;UBERON:0002950,2.59e-10,1;UBERON:0001891,2.59e-10,1;UBERON:0009616,2.59e-10,1;UBERON:0010286,2.59e-10,1;UBERON:0002022,4.06e-10,1;UBERON:0002336,7.55e-10,1;UBERON:0011215,7.55e-10,1;UBERON:0001018,7.55e-10,1;UBERON:0002473,7.55e-10,1;UBERON:0005340,7.55e-10,1;UBERON:0003544,7.55e-10,1;UBERON:0005970,7.55e-10,1;UBERON:0002316,7.55e-10,1;UBERON:0001020,7.55e-10,1;UBERON:0002437,7.55e-10,1;UBERON:0002784,1.52e-09,4;UBERON:0000483,3.03e-09,306;UBERON:0000119,4.02e-09,309 | |||
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|short_description=p8@SCRN1 | |||
}} | }} |
Latest revision as of 05:05, 18 September 2015
Short description: | p8@SCRN1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SCRN1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 23bp_to_ENST00000409497, uc010kvp.2_5end |
EntrezGene: | SCRN1 |
HGNC: | 22192 |
UniProt: | Q12765 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data