FFCP PHASE1:Hg19::chrX:71525756..71525771,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chrX:71525756..71525771,- to FFCP PHASE1:Hg19::chrX:71525756..71525771,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4435 | |EntrezGene=4435 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1986 | |HGNC=1986 | ||
|TSSclassifier=strong | |||
|UniProt=Q99966 | |UniProt=Q99966 | ||
|association_with_transcript=0bp_to_ENST00000431381,ENST00000445983,NM_001144885,NM_001144887,uc011mqc.1,uc011mqd.1_5end | |||
|cluster_id=chrX:71525756..71525771,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_CITED1_5end | |||
|id=chrX:71525756..71525771,- | |||
|ontology_enrichment_celltype=CL:0000148!1.16e-07!10;CL:0000541!1.16e-07!10 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.89e-11;10!CL:0002567;2.28e-08;3!CL:0002521;8.10e-08;3!CL:0000147;8.69e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.91e-11,10;CL:0000541,1.91e-11,10;CL:0002567,2.30e-08,3;CL:0002521,8.34e-08,3;CL:0000147,8.75e-08,14;CL:0000047,2.36e-07,8;CL:0000133,9.48e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.36e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-33!57;UBERON:0005068!1.05e-33!57;UBERON:0006241!1.05e-33!57;UBERON:0007135!1.05e-33!57;UBERON:0001017!4.93e-33!82;UBERON:0005743!4.19e-32!86;UBERON:0000073!4.53e-32!94;UBERON:0001016!4.53e-32!94;UBERON:0002616!8.29e-29!59;UBERON:0000955!9.78e-27!69;UBERON:0006238!9.78e-27!69;UBERON:0003075!1.63e-25!86;UBERON:0007284!1.63e-25!86;UBERON:0007023!1.66e-24!115;UBERON:0002346!1.66e-23!90;UBERON:0003080!2.93e-23!42;UBERON:0002780!2.96e-22!41;UBERON:0001890!2.96e-22!41;UBERON:0006240!2.96e-22!41;UBERON:0002020!1.01e-19!34;UBERON:0003528!1.01e-19!34;UBERON:0001893!2.47e-19!34;UBERON:0002791!1.48e-18!33;UBERON:0001869!2.93e-18!32;UBERON:0004121!1.42e-17!169;UBERON:0003056!5.34e-17!61;UBERON:0000924!1.28e-16!173;UBERON:0006601!1.28e-16!173;UBERON:0000956!1.70e-14!25;UBERON:0000203!1.70e-14!25;UBERON:0000153!1.89e-14!129;UBERON:0007811!1.89e-14!129;UBERON:0000033!5.77e-14!123;UBERON:0002619!2.97e-12!22;UBERON:0004732!3.01e-12!13;UBERON:0003076!1.39e-11!15;UBERON:0003057!1.39e-11!15;UBERON:0004733!3.05e-11!12;UBERON:0002028!3.05e-11!12;UBERON:0007277!3.05e-11!12;UBERON:0001950!1.25e-10!20;UBERON:0002298!1.53e-08!8;UBERON:0002680!2.04e-08!9;UBERON:0001895!2.04e-08!9;UBERON:0010092!2.04e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;7.93e-15;53!UBERON:0002616;7.93e-15;53!UBERON:0002298;4.21e-12;6!UBERON:0003528;1.88e-11;34!UBERON:0002020;1.88e-11;34!UBERON:0004732;2.39e-11;13!UBERON:0002780;3.61e-11;41!UBERON:0001890;3.61e-11;41!UBERON:0001869;8.08e-11;32!UBERON:0000349;3.21e-10;5!UBERON:0001893;3.39e-10;34!UBERON:0000955;4.65e-10;68!UBERON:0003296;5.83e-10;4!UBERON:0010133;5.83e-10;4!UBERON:0002791;6.60e-10;32!UBERON:0004733;1.04e-09;12!UBERON:0002028;1.04e-09;12!UBERON:0001017;7.53e-09;75!UBERON:0000956;8.92e-09;25!UBERON:0000203;8.92e-09;25!UBERON:0001016;3.12e-08;83!UBERON:0002190;8.10e-08;3!UBERON:0006947;1.80e-07;3!UBERON:0004054;1.80e-07;3!UBERON:0003135;5.15e-07;11!UBERON:0001896;5.94e-07;3!UBERON:0005290;5.94e-07;3!UBERON:0002619;7.48e-07;22!UBERON:0000988;8.56e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.45e-23,81;UBERON:0001016,7.42e-23,89;UBERON:0001049,1.18e-22,56;UBERON:0005068,1.18e-22,56;UBERON:0006241,1.18e-22,56;UBERON:0007135,1.18e-22,56;UBERON:0000073,1.43e-22,53;UBERON:0002616,1.43e-22,53;UBERON:0000955,4.90e-17,68;UBERON:0006238,4.90e-17,68;UBERON:0007023,2.49e-16,114;UBERON:0003075,1.19e-15,82;UBERON:0007284,1.19e-15,82;UBERON:0002780,9.17e-15,41;UBERON:0001890,9.17e-15,41;UBERON:0003080,9.17e-15,41;UBERON:0006240,9.17e-15,41;UBERON:0010371,1.03e-14,104;UBERON:0002346,1.51e-14,86;UBERON:0003528,8.68e-13,34;UBERON:0002020,8.68e-13,34;UBERON:0002298,3.22e-12,6;UBERON:0001869,6.94e-12,32;UBERON:0004121,1.11e-11,171;UBERON:0000924,1.11e-11,171;UBERON:0006601,1.11e-11,171;UBERON:0004732,2.24e-11,13;UBERON:0001893,5.57e-11,34;UBERON:0003056,1.07e-10,61;UBERON:0002791,2.18e-10,32;UBERON:0000349,2.38e-10,5;UBERON:0010314,2.41e-10,132;UBERON:0003296,6.51e-10,4;UBERON:0010133,6.51e-10,4;UBERON:0004733,9.79e-10,12;UBERON:0002028,9.79e-10,12;UBERON:0007277,9.79e-10,12;UBERON:0003076,2.11e-09,15;UBERON:0003057,2.11e-09,15;UBERON:0000956,9.03e-09,25;UBERON:0000203,9.03e-09,25;UBERON:0002190,8.34e-08,3;UBERON:0006947,2.12e-07,3;UBERON:0004054,2.12e-07,3;UBERON:0001896,4.59e-07,3;UBERON:0005290,4.59e-07,3;UBERON:0010096,4.59e-07,3;UBERON:0003135,5.50e-07,11;UBERON:0002619,7.55e-07,22;UBERON:0000988,8.43e-07,3 | |||
|phase1_expression=0,1.07050261945492,0.563817616383885,0,0.893922188854576,0,55.7259731970283,8.84407822797563,6.00726944859629,0,0,0,0,0,0,0,0,0,0,1.23121058076788,0.204000691244253,0.940364164434263,8.5870796139317,0.136874425072884,2.51085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0.251248665256743,0,0,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.087834785693126,129.40732659174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.55605517699883,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.414644220061482,0,0,1.56449532329816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0.176096868026452,0,0,0,117.97908759485,233.776916441666,151.210506900961,131.725783437483,65.3982853593137,54.0617504119051,34.2991719156694,0,0,0,0,7.15312891703765,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,32.0159226520304,26.0279707715243,17.0123538811093,13.4013012267479,22.3278563078607,0,0,0,0.24538298343828,1.00034104211935,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,0,0,0,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0.0821271560138091,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0.290012154876366,1.84858340537573,1.84204409671355,0,0.214840489736547,0.145016693914229,0.681813019328807,0.979352392114111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0.551365343546124,0,0,0,2.62357900818653,0,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0.320472213382419,43.3115934868511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.2897173040096,194.478090337385,0,0,1.4098700508785,0.18714054040822,0.439524537815682,0.121360521749513,0,0,0,0,0.307160702099232,1.9882952955326,2.39138007897872,0,0,0.211125408127993,0.19924798825107,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0.969332746095218,0.927680981618513,1.99613798001194,0,0,15.9499906595655,0,0,0,0.344743373241465,0,0.173624994933292,0,1.5677537021303,1.52581736317083,0.774054819518572,0.591095237907095,1.75508317723178,0,0,2.5393585306253,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0.167821586975843,0.37950746544837,0,0,0,0,0,0,0.796118080530053,0,1.18608451472249,1.60633120630454,1.56632924258183,0.67401132980677,1.60515529459758,0,0,0.19566461893209,0,6.31335044559025,0,0.61214552326098,0.63186579628488,1.20258735531594,0.622129148383483,0,0,0.627865836814451,0,0,0.138674673013139,0,0,0,215.787435278907,0.171986032471617,0,0,0,0,0,6.77942222341597,0,0,0.569797163602908,0,0,0.213452994739353,0,0,0.114536596165916,0,0.14405479798815,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0,0,0.717873024576814,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0.0984274815147488,0,3.18091875923721,1.0896272488926,0,0.137539436597234,0,0,0,1.76173714308272,0,0.551639951094387,3.77673034571986,0.105600336519406,0,0,0,0,3.5597595271665,0,0,0.979762080328227,0,0.903017728242729,0,0.113312091520126,0,0,1.80996138906171,5.68600187493567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09823638411767,0.250381861413,1.72022758707021,2.3295100822739,2.6080489235381,0,0,72.0333308322827,1.14186133417987,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,1.59989916683944,0.213383459388282,0,0,0,0,0,0,18.2223931260392,0.314531883711793,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,1.79841830270087,1.41696576325585,0.319267718114302,0.615349092722265,0,0.96820153449905,1.13032951942296,4.28308260777463,0,0.235939446695481,0,0,0,12.4264786690818,0.795664888465099,0.150420656698515,0,0,0,0.163771917510097,0,1.2156765231311,0,1.2401207790071,0.824405532520789,2.18789923607288,0,0,0,0,5.35701835878287,2.01770233331294,253.711622570912,181.674428698336,0.266107110487916,0,0.171488009437418,1.15548546060614,0.920818829879887,0,0,2.90424443546902,1.88538707899202,0,0,0,0,81.3403072730349,0,2.20858708199438,1.39086617842064,0,0,0,0,0,0,0,1.27016115057279,0,0,0,0,0,0,0,0,6.95888658802919,1.94284397223656,0.467878926924211,0.397901550322736,0,0,0,0,0.154348316215889,0.218559560503957,0,0,10.1340915253699,0.785233868459781,0,1.2679671827502,0,0,0,0,0,0.352894871715692,0,0,0,0.143339583151451,0.157771562193185,1.8357702351547,0,0,0,0,0,0.252332849670158,0,0.126698501011437,0,0,0.275684698604535,1.50424523575425,449.973910019906,382.116849602711,0,0.413731983447581,0,1.42838658878244,0.193766729508018,0.186224142887574,0,1.33659032384146,0.404234377916439,0,1.368933204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| 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| ||
|short_description=p1@CITED1 | |||
}} | }} |
Latest revision as of 08:25, 16 September 2015
Short description: | p1@CITED1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CITED1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000431381, ENST00000445983, NM_001144885, NM_001144887, uc011mqc.1, uc011mqd.1_5end |
EntrezGene: | CITED1 |
HGNC: | 1986 |
UniProt: | Q99966 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.91e-11 | 10 |
melanoblast | 1.91e-11 | 10 |
light melanocyte | 2.30e-08 | 3 |
subcutaneous fat cell | 8.34e-08 | 3 |
pigment cell | 8.75e-08 | 14 |
neuronal stem cell | 2.36e-07 | 8 |
neurectodermal cell | 9.48e-07 | 59 |