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FFCP PHASE1:Mm9::chr9:55174766..55174787,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr9:55174766..55174787,+
|DHSsupport=NA
|short_description=p1@AI118078
|DPIdataset=NA
|description=CAGE_peak_1_at_AI118078_5end
|association_with_transcript=10bp_to_ENSMUST00000034862,NM_172923,uc009psj.1,uc009psk.1_5end
|EntrezGene=244886
|EntrezGene=244886
|HGNC=
|HGNC=
|MCL_coexpression_id=30
|TSSclassifier=NA
|UniProt=Q8BZB3,B1B1B2
|UniProt=Q8BZB3,B1B1B2
|association_with_transcript=10bp_to_ENSMUST00000034862,NM_172923,uc009psj.1,uc009psk.1_5end
|cluster_id=chr9:55174766..55174787,+
|description=CAGE_peak_1_at_AI118078_5end
|id=chr9:55174766..55174787,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000117,1.54e-07,23;CL:0000337,1.54e-07,23;CL:0000192,7.08e-07,3;CL:0000359,7.08e-07,3;CL:0002539,7.08e-07,3;CL:0000514,7.08e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.99e-14!71;UBERON:0003075!9.99e-14!71;UBERON:0007284!9.99e-14!71;UBERON:0000033!8.33e-13!63;UBERON:0001049!1.37e-11!52;UBERON:0005068!1.37e-11!52;UBERON:0006241!1.37e-11!52;UBERON:0007135!1.37e-11!52;UBERON:0001017!5.15e-11!73;UBERON:0005743!5.15e-11!73;UBERON:0003056!9.99e-11!49;UBERON:0004121!1.97e-10!102;UBERON:0000924!1.97e-10!102;UBERON:0006601!1.97e-10!102;UBERON:0000073!3.43e-10!75;UBERON:0001016!3.43e-10!75;UBERON:0002020!1.81e-09!34;UBERON:0000955!6.19e-09!50;UBERON:0006238!6.19e-09!50;UBERON:0002616!2.27e-08!49;UBERON:0003080!3.02e-07!40;UBERON:0002780!8.79e-07!39;UBERON:0001890!8.79e-07!39;UBERON:0006240!8.79e-07!39;UBERON:0002791!9.95e-07!29;UBERON:0003528!9.95e-07!29;UBERON:0001893!9.95e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.40e-23,64;UBERON:0003075,2.40e-23,64;UBERON:0007284,2.40e-23,64;UBERON:0010371,6.62e-21,73;UBERON:0001049,7.51e-20,52;UBERON:0005068,7.51e-20,52;UBERON:0006241,7.51e-20,52;UBERON:0007135,7.51e-20,52;UBERON:0000073,2.37e-17,54;UBERON:0004121,1.27e-16,95;UBERON:0000924,1.27e-16,95;UBERON:0006601,1.27e-16,95;UBERON:0010314,6.60e-15,92;UBERON:0001017,1.08e-14,73;UBERON:0003076,1.21e-14,12;UBERON:0003057,1.21e-14,12;UBERON:0001016,4.14e-14,75;UBERON:0000955,4.32e-14,47;UBERON:0006238,4.32e-14,47;UBERON:0003056,2.21e-13,49;UBERON:0002020,2.94e-13,34;UBERON:0002616,7.59e-13,46;UBERON:0002240,5.96e-11,6;UBERON:0005174,5.96e-11,6;UBERON:0001137,5.96e-11,6;UBERON:0002420,3.41e-10,8;UBERON:0007245,3.41e-10,8;UBERON:0010009,3.41e-10,8;UBERON:0010011,3.41e-10,8;UBERON:0000454,3.41e-10,8;UBERON:0001948,1.06e-09,5;UBERON:0002315,1.06e-09,5;UBERON:0004111,3.34e-09,122;UBERON:0003080,3.50e-09,40;UBERON:0000025,1.12e-08,114;UBERON:0002780,2.89e-08,39;UBERON:0001890,2.89e-08,39;UBERON:0006240,2.89e-08,39;UBERON:0000474,4.33e-08,9;UBERON:0002950,1.09e-07,4;UBERON:0001891,1.09e-07,4;UBERON:0009616,1.09e-07,4;UBERON:0010286,1.09e-07,4;UBERON:0003528,1.13e-07,29;UBERON:0002791,1.13e-07,29;UBERON:0001893,1.13e-07,29;UBERON:0003975,4.43e-07,5;UBERON:0001135,7.08e-07,3;UBERON:0004237,7.08e-07,3;UBERON:0004695,7.08e-07,3;UBERON:0002111,7.08e-07,3;UBERON:0004178,7.08e-07,3
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,2.23029248682932,11.5634453861859,0,0,0,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0,3.14216082844184,3.75476519617743,0.122490799214954,0.191690942036473,0.919218786610021,0,0.893811366596314,0.153606533256243,1.18697658957174,0.823388792421687,1.56274011167028,4.4669279840221,2.25105044012672,1.06958773443767,2.94628585473668,2.42031857358475,1.3047961207771,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,89.5909238855334,87.3392767412108,0,0,0,0.127070227073065,1.79748767285787,2.74500361691176,1.00523481690292,1.04294592115366,0.511430914660661,1.66230435647648,1.29793010454206,0,0.124406970610093,0.252722758433675,5.89237196482127,0.130120442962704,0.229902104433473,0.360124259610698,0.753524089178575,2.10913147369116,5.25266253167884,5.43470002446427,21.4723797713383,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.99259867206745,0,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0,8.03303291054518,5.39372323791421,0,0,4.61916344323099,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,15.6602218646742,0,0.129358683782755,0.428674070063185,0.532020700926821,0,0,0,2.58138878870081,0.847328283455281,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0.136694227721025,0,0.509935289981566,1.53946597556024,1.65839968565309,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0.436725127492355,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.864090018773596,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.335769232728157,0.579568782096571,21.0204372505324,10.9890974560359,3.42989406526505,0,1.12950368523413,3.68260189205742,1.14579102687879,2.40594455281163,2.74033007908257,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.729320151204882,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.37456602987953,0.256100609619477,0.631790158511746,0.952587382566147,0.463537303779422,0.578727661391115,0.824171801606613,0.883193520806384,0,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0,0.999242311751784,0.233931608445408,0.429742108096597,0,0.661774257358546,0.231867835620421
|phase1_expression=0.320297694209588,0,0,0,0,0.16787927191189,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0.157731082679119,0.137114433605739,0,3.91199134694921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77690453926732,2.23029248682932,11.5634453861859,0,0,0,0,0.279972843250725,0,0,0,0.336093799142464,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.270011876663381,0,3.14216082844184,3.75476519617743,0.122490799214954,0.191690942036473,0.919218786610021,0,0.893811366596314,0.153606533256243,1.18697658957174,0.823388792421687,1.56274011167028,4.4669279840221,2.25105044012672,1.06958773443767,2.94628585473668,2.42031857358475,1.3047961207771,0,0,0,0,0,0,0,0,1.26399978118577,0,0,0,1.12674735821344,0,0,0,0,0,0,0.11418387971906,0,0.445326417194474,0,0,0,0.150722640552623,0,0,0,0,0,0,0.220841518460394,0,0,89.5909238855334,87.3392767412108,0,0,0,0.127070227073065,1.79748767285787,2.74500361691176,1.00523481690292,1.04294592115366,0.511430914660661,1.66230435647648,1.29793010454206,0,0.124406970610093,0.252722758433675,5.89237196482127,0.130120442962704,0.229902104433473,0.360124259610698,0.753524089178575,2.10913147369116,5.25266253167884,5.43470002446427,21.4723797713383,0,0,0.175951124163949,0.219195732427575,0.556094498451196,0.348252166522167,0.205782136407943,0,0,0.257347907114715,0.284163499395593,0,0,0,0.23674473558521,0.196764231747404,0.308534225774757,0,0,0,0,0.164167464079095,0.162137619091711,0.146199987425332,0.219550115291051,0.268412837520744,0.420579897128254,0.411618449517138,0,0,0,0,0.128867461322093,0,0.444756087689741,0,0,0,0,0.198956472041151,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0.295220295959204,0,0,0.889357881261447,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.936113019343682,0,0.179397413521912,0.964887042726734,0,0,0,0,0,0.335012514883631,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.99259867206745,0,0.252470927204373,0.631016438832513,0.390438744296638,0.215423397732799,0.238968797952552,0.222798674082394,0,0.809621403349789,0,0,8.03303291054518,5.39372323791421,0,0,4.61916344323099,0,0,0,0,0,0,0.258428293168221,0,0.356497378384721,0.632073515871632,0,0,15.6602218646742,0,0.129358683782755,0.428674070063185,0.532020700926821,0,0,0,2.58138878870081,0.847328283455281,0,0,0.161464426695906,0.0603129249281559,0,0.164140899745061,0,1.11255181206306,0,0,0,0,0.136694227721025,0,0.509935289981566,1.53946597556024,1.65839968565309,0,0.158167996790568,0.609958401380546,0.108005340821801,0,0.436725127492355,0,0.165306911450672,0,0,0,0,0,0.165458490457098,0.388902376688095,0,0,0.117357238645754,0.13020438484395,0.419437377702843,0.483168241652012,0.864090018773596,0,0.202725215290164,0,0.129920822977795,0,0,0,0.147689527174577,0,0,0,0.0974578807397524,0,0,0.226730383615211,0.443971906748129,0.269141569828427,0.335769232728157,0.579568782096571,21.0204372505324,10.9890974560359,3.42989406526505,0,1.12950368523413,3.68260189205742,1.14579102687879,2.40594455281163,2.74033007908257,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0.103787347584177,0.798049746802062,0.170733605754134,0.729320151204882,0,0.551530525350042,0.222246727801615,0.412070114477788,0.320919209591815,0.758091635291392,0.760437899670719,0.754505365544305,0.37456602987953,0.256100609619477,0.631790158511746,0.952587382566147,0.463537303779422,0.578727661391115,0.824171801606613,0.883193520806384,0,0.354951612318675,0.238436189947321,0.145346416632329,0.470546902076653,0.169229215783353,0.365855945745545,0.263069711437843,0.543216455383447,0.561142271657738,0.237270036248348,0.492522411877817,0,0.154936841185966,0,0.999242311751784,0.233931608445408,0.429742108096597,0,0.661774257358546,0.231867835620421
|short_description=p1@AI118078
}}
}}

Latest revision as of 20:52, 26 September 2015

Short description:p1@AI118078
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_AI118078_5end
Coexpression cluster:MCL_coexpression_mm9:30
Association with transcript: 10bp_to_ENSMUST00000034862, NM_172923, uc009psj.1, uc009psk.1_5end
EntrezGene:AI118078
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@AI118078

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.23
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D83.78
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.23
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B311.56
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.28
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.75
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.19
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.95
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B289.59
cerebellum, neonate N30.CNhs11135.1395-42I287.34
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A41.80
corpus striatum, adult.CNhs10487.19-21D82.75
corpus striatum, neonate N00.CNhs11226.630-43F11.01
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G45.89
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C62.11
eyeball, neonate N01.CNhs11140.1532-43E75.25
eyeball, neonate N02.CNhs11205.1551-44G85.43
eyeball, neonate N16.CNhs11188.777-19A221.47
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.16
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.30
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.89
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.94
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.96
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.34
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.03
ovary, adult.CNhs10507.91-2I75.39
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G64.62
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G815.66
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I72.58
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C91.54
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D31.66
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.61
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.39
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.42
testis, neonate N20.CNhs11110.839-18H30.48
testis, neonate N30.CNhs11130.1391-42E20.86
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F521.02
uterus, adult.CNhs10509.92-27E510.99
vagina, adult.CNhs10502.89-27D53.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.41
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.63
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.88
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.54
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.40e-2364
neural plate2.40e-2364
presumptive neural plate2.40e-2364
ecto-epithelium6.62e-2173
neural tube7.51e-2052
neural rod7.51e-2052
future spinal cord7.51e-2052
neural keel7.51e-2052
regional part of nervous system2.37e-1754
ectoderm-derived structure1.27e-1695
ectoderm1.27e-1695
presumptive ectoderm1.27e-1695
structure with developmental contribution from neural crest6.60e-1592
central nervous system1.08e-1473
posterior neural tube1.21e-1412
chordal neural plate1.21e-1412
nervous system4.14e-1475
brain4.32e-1447
future brain4.32e-1447
pre-chordal neural plate2.21e-1349
gray matter2.94e-1334
regional part of brain7.59e-1346
spinal cord5.96e-116
dorsal region element5.96e-116
dorsum5.96e-116
basal ganglion3.41e-108
nuclear complex of neuraxis3.41e-108
aggregate regional part of brain3.41e-108
collection of basal ganglia3.41e-108
cerebral subcortex3.41e-108
regional part of spinal cord1.06e-095
gray matter of spinal cord1.06e-095
anatomical conduit3.34e-09122
anterior neural tube3.50e-0940
tube1.12e-08114
regional part of forebrain2.89e-0839
forebrain2.89e-0839
future forebrain2.89e-0839
female reproductive system4.33e-089
regional part of midbrain1.09e-074
midbrain1.09e-074
presumptive midbrain1.09e-074
midbrain neural tube1.09e-074
brain grey matter1.13e-0729
regional part of telencephalon1.13e-0729
telencephalon1.13e-0729
internal female genitalia4.43e-075
smooth muscle tissue7.08e-073
blood vessel smooth muscle7.08e-073
arterial system smooth muscle7.08e-073
artery smooth muscle tissue7.08e-073
aorta smooth muscle tissue7.08e-073
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