FFCP PHASE1:Hg19::chr11:119217318..119217346,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83552 | |EntrezGene=83552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18121 | |HGNC=18121 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000526059_5end | |association_with_transcript=0bp_to_ENST00000526059_5end | ||
|cluster_id=chr11:119217318..119217346,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_2_at_MFRP_5end | |description=CAGE_peak_2_at_MFRP_5end | ||
|id=chr11:119217318..119217346,- | |id=chr11:119217318..119217346,- | ||
|ontology_enrichment_celltype=CL:0002586!6.07e-21!3;CL:0000149!7.51e-16!4;CL:0000147!9.41e-08!14 | |ontology_enrichment_celltype=CL:0002586!6.07e-21!3;CL:0000149!7.51e-16!4;CL:0000147!9.41e-08!14 | ||
|ontology_enrichment_celltype_v019=CL:0002586;1.71e-40;3!CL:0000149;1.42e-30;4!CL:0000147;3.44e-09;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,1.71e-40,3;CL:0000149,1.42e-30,4;CL:0000147,3.44e-09,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.82e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!6.26e-35!86;UBERON:0000073!2.83e-31!94;UBERON:0001016!2.83e-31!94;UBERON:0003075!3.23e-26!86;UBERON:0007284!3.23e-26!86;UBERON:0002346!6.91e-25!90;UBERON:0001017!4.15e-24!82;UBERON:0001049!2.96e-22!57;UBERON:0005068!2.96e-22!57;UBERON:0006241!2.96e-22!57;UBERON:0007135!2.96e-22!57;UBERON:0000966!4.91e-22!5;UBERON:0005388!4.91e-22!5;UBERON:0001802!4.91e-22!5;UBERON:0001896!3.55e-21!3;UBERON:0005290!3.55e-21!3;UBERON:0010096!3.55e-21!3;UBERON:0001781!6.07e-21!3;UBERON:0001782!6.07e-21!3;UBERON:0005424!6.07e-21!3;UBERON:0000955!3.20e-20!69;UBERON:0006238!3.20e-20!69;UBERON:0007023!1.22e-18!115;UBERON:0000033!5.71e-17!123;UBERON:0000153!5.24e-16!129;UBERON:0007811!5.24e-16!129;UBERON:0002616!7.05e-16!59;UBERON:0004121!1.14e-15!169;UBERON:0003076!2.14e-15!15;UBERON:0003057!2.14e-15!15;UBERON:0003056!2.40e-15!61;UBERON:0000924!3.30e-15!173;UBERON:0006601!3.30e-15!173;UBERON:0001905!4.18e-14!2;UBERON:0002757!4.18e-14!2;UBERON:0010134!4.18e-14!2;UBERON:0002784!4.18e-14!2;UBERON:0005408!4.18e-14!2;UBERON:0001899!4.18e-14!2;UBERON:0002780!4.72e-11!41;UBERON:0001890!4.72e-11!41;UBERON:0006240!4.72e-11!41;UBERON:0003080!9.20e-11!42;UBERON:0002240!1.64e-09!3;UBERON:0004733!3.69e-09!12;UBERON:0002028!3.69e-09!12;UBERON:0007277!3.69e-09!12;UBERON:0001894!5.73e-09!7;UBERON:0006222!5.73e-09!7;UBERON:0004732!1.84e-08!13;UBERON:0000970!2.74e-08!20;UBERON:0002298!3.01e-08!8;UBERON:0002336!3.80e-08!1;UBERON:0001018!3.80e-08!1;UBERON:0002473!3.80e-08!1;UBERON:0005340!3.80e-08!1;UBERON:0002316!3.80e-08!1;UBERON:0003544!3.80e-08!1;UBERON:0001020!3.80e-08!1;UBERON:0005970!3.80e-08!1;UBERON:0002437!3.80e-08!1;UBERON:0002104!7.02e-08!21;UBERON:0001882!9.10e-08!1;UBERON:0005403!9.10e-08!1;UBERON:0002581!1.64e-07!1;UBERON:0003296!1.76e-07!4;UBERON:0010133!1.76e-07!4;UBERON:0002022!1.99e-07!1;UBERON:0000020!3.59e-07!23;UBERON:0001032!7.35e-07!24;UBERON:0004456!7.35e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.52e-43;5!UBERON:0005388;4.52e-43;5!UBERON:0001802;4.52e-43;5!UBERON:0001896;5.80e-41;3!UBERON:0005290;5.80e-41;3!UBERON:0001781;1.71e-40;3!UBERON:0001782;1.71e-40;3!UBERON:0001905;1.04e-26;2!UBERON:0002757;1.04e-26;2!UBERON:0010134;1.04e-26;2!UBERON:0005408;1.04e-26;2!UBERON:0001899;1.04e-26;2!UBERON:0002298;7.28e-21;6!UBERON:0000970;1.03e-16;20!UBERON:0002104;6.44e-16;21!UBERON:0002336;9.36e-15;1!UBERON:0011215;9.36e-15;1!UBERON:0001018;9.36e-15;1!UBERON:0002473;9.36e-15;1!UBERON:0005340;9.36e-15;1!UBERON:0003544;9.36e-15;1!UBERON:0005970;9.36e-15;1!UBERON:0002316;9.36e-15;1!UBERON:0001020;9.36e-15;1!UBERON:0002437;9.36e-15;1!UBERON:0000020;1.56e-14;23!UBERON:0001032;6.27e-14;24!UBERON:0004456;6.27e-14;24!UBERON:0003296;6.99e-14;4!UBERON:0010133;6.99e-14;4!UBERON:0002784;6.99e-14;4!UBERON:0000019;1.34e-11;19!UBERON:0000047;1.34e-11;19!UBERON:0004088;1.34e-11;19!UBERON:0010230;1.34e-11;19!UBERON:0007625;1.52e-11;11!UBERON:0004733;9.61e-11;12!UBERON:0002028;9.61e-11;12!UBERON:0001456;1.61e-10;21!UBERON:0000073;3.30e-10;53!UBERON:0002616;3.30e-10;53!UBERON:0004732;5.84e-10;13!UBERON:0001894;2.49e-08;7!UBERON:0005162;5.02e-08;2!UBERON:0000122;5.02e-08;2!UBERON:0002360;5.74e-08;2!UBERON:0000094;5.74e-08;2!UBERON:0010743;5.74e-08;2!UBERON:0001954;6.36e-08;2!UBERON:0003022;6.36e-08;2!UBERON:0002421;6.36e-08;2!UBERON:0002600;6.36e-08;2!UBERON:0001017;6.52e-08;75!UBERON:0000955;1.57e-07;68!UBERON:0002780;8.71e-07;41!UBERON:0001890;8.71e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,5.80e-41,3;UBERON:0005290,5.80e-41,3;UBERON:0010096,5.80e-41,3;UBERON:0001782,1.71e-40,3;UBERON:0005424,1.71e-40,3;UBERON:0000966,5.61e-36,6;UBERON:0005388,5.61e-36,6;UBERON:0001802,5.61e-36,6;UBERON:0001781,1.42e-30,4;UBERON:0001905,1.04e-26,2;UBERON:0002757,1.04e-26,2;UBERON:0010134,1.04e-26,2;UBERON:0005408,1.04e-26,2;UBERON:0001899,1.04e-26,2;UBERON:0003075,1.11e-21,82;UBERON:0007284,1.11e-21,82;UBERON:0002298,7.28e-21,6;UBERON:0002346,1.26e-20,86;UBERON:0010371,7.31e-17,104;UBERON:0003056,2.45e-16,61;UBERON:0000970,6.55e-16,21;UBERON:0002104,6.55e-16,21;UBERON:0000073,6.16e-15,53;UBERON:0002616,6.16e-15,53;UBERON:0001017,8.39e-15,81;UBERON:0002336,9.36e-15,1;UBERON:0011215,9.36e-15,1;UBERON:0001018,9.36e-15,1;UBERON:0002473,9.36e-15,1;UBERON:0005340,9.36e-15,1;UBERON:0003544,9.36e-15,1;UBERON:0005970,9.36e-15,1;UBERON:0002316,9.36e-15,1;UBERON:0001020,9.36e-15,1;UBERON:0002437,9.36e-15,1;UBERON:0000955,2.45e-14,68;UBERON:0006238,2.45e-14,68;UBERON:0001049,4.11e-14,56;UBERON:0005068,4.11e-14,56;UBERON:0006241,4.11e-14,56;UBERON:0007135,4.11e-14,56;UBERON:0000020,6.36e-14,24;UBERON:0001032,6.36e-14,24;UBERON:0004456,6.36e-14,24;UBERON:0003296,6.99e-14,4;UBERON:0010133,6.99e-14,4;UBERON:0002784,6.99e-14,4;UBERON:0004121,1.94e-13,171;UBERON:0000924,1.94e-13,171;UBERON:0006601,1.94e-13,171;UBERON:0001016,3.02e-13,89;UBERON:0010314,5.06e-13,132;UBERON:0007023,8.30e-13,114;UBERON:0007625,1.52e-11,11;UBERON:0000019,4.93e-11,20;UBERON:0000047,4.93e-11,20;UBERON:0010312,4.93e-11,20;UBERON:0004088,4.93e-11,20;UBERON:0010230,4.93e-11,20;UBERON:0003072,4.93e-11,20;UBERON:0004128,4.93e-11,20;UBERON:0003071,4.93e-11,20;UBERON:0004733,9.61e-11,12;UBERON:0002028,9.61e-11,12;UBERON:0007277,9.61e-11,12;UBERON:0001456,4.72e-10,22;UBERON:0004732,5.84e-10,13;UBERON:0003076,1.05e-08,15;UBERON:0003057,1.05e-08,15;UBERON:0001894,2.49e-08,7;UBERON:0006222,2.49e-08,7;UBERON:0005162,5.02e-08,2;UBERON:0000122,5.02e-08,2;UBERON:0002360,5.74e-08,2;UBERON:0000094,5.74e-08,2;UBERON:0010743,5.74e-08,2;UBERON:0001954,6.15e-08,2;UBERON:0003022,6.15e-08,2;UBERON:0002421,6.15e-08,2;UBERON:0002600,6.15e-08,2;UBERON:0002780,9.02e-08,41;UBERON:0001890,9.02e-08,41;UBERON:0003080,9.02e-08,41;UBERON:0006240,9.02e-08,41;UBERON:0005085,3.42e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.7239688925748,5.24823433119529,19.8480820745225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,7.89787429754301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0524866441113,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10148000107438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94637371169036,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.1443333750603,60.2344749845108,10.7426777088593,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,1.00885116665647,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,132.088653638461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,4.01149792126397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,38.7239688925748,5.24823433119529,19.8480820745225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87733098438087,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295547618953547,7.89787429754301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0524866441113,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.10148000107438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.94637371169036,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.1443333750603,60.2344749845108,10.7426777088593,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321146125482298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.14280734351315,1.00885116665647,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,132.088653638461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0.594092800654172,0,0,0,0,0,0,0,0,0,0,0,0,4.01149792126397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@MFRP | |short_description=p2@MFRP | ||
}} | }} |
Latest revision as of 03:30, 16 September 2015
Short description: | p2@MFRP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MFRP_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_ENST00000526059_5end |
EntrezGene: | MFRP |
HGNC: | 18121 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 1.71e-40 | 3 |
visual pigment cell | 1.42e-30 | 4 |
pigment cell | 3.44e-09 | 14 |