FFCP PHASE1:Hg19::chr11:134146239..134146287,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=112937 | |EntrezGene=112937 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25147 | |HGNC=25147 | ||
|TSSclassifier=strong | |||
|UniProt=Q8NCI6 | |UniProt=Q8NCI6 | ||
|association_with_transcript=0bp_to_NM_001080407,uc009zdf.2,uc010scs.1_5end | |association_with_transcript=0bp_to_NM_001080407,uc009zdf.2,uc010scs.1_5end | ||
|cluster_id=chr11:134146239..134146287,+ | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_GLB1L3_5end | |description=CAGE_peak_1_at_GLB1L3_5end | ||
|id=chr11:134146239..134146287,+ | |id=chr11:134146239..134146287,+ | ||
|ontology_enrichment_celltype=CL:0002159!7.35e-11!13;CL:0002077!2.58e-08!33;CL:0002368!3.06e-08!13;CL:0000240!5.89e-07!6;CL:0000311!5.89e-07!6;CL:0000079!5.89e-07!6;CL:0000237!5.89e-07!6;CL:0000036!5.89e-07!6;CL:0000357!5.89e-07!6;CL:0000114!5.89e-07!6;CL:0000221!6.07e-07!71;CL:0000362!6.79e-07!8 | |ontology_enrichment_celltype=CL:0002159!7.35e-11!13;CL:0002077!2.58e-08!33;CL:0002368!3.06e-08!13;CL:0000240!5.89e-07!6;CL:0000311!5.89e-07!6;CL:0000079!5.89e-07!6;CL:0000237!5.89e-07!6;CL:0000036!5.89e-07!6;CL:0000357!5.89e-07!6;CL:0000114!5.89e-07!6;CL:0000221!6.07e-07!71;CL:0000362!6.79e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.59e-14;13!CL:0002322;2.07e-10;5!CL:0000312;2.41e-10;5!CL:0000240;1.51e-08;6!CL:0000311;1.51e-08;6!CL:0000079;1.51e-08;6!CL:0000237;1.51e-08;6!CL:0002159;3.84e-08;14!CL:0002202;4.55e-08;9!CL:0002632;4.55e-08;9!CL:0000362;7.56e-08;9!CL:0002321;1.10e-07;15!CL:0000307;4.21e-07;3!CL:0002328;4.49e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.95e-14,13;CL:0002322,1.95e-10,5;CL:0000312,3.11e-10,5;CL:0000240,1.86e-08,6;CL:0000311,1.86e-08,6;CL:0000079,1.86e-08,6;CL:0000237,1.86e-08,6;CL:0000036,1.86e-08,6;CL:0000357,1.86e-08,6;CL:0000114,1.86e-08,6;CL:0002202,4.22e-08,9;CL:0002632,4.22e-08,9;CL:0002159,4.68e-08,14;CL:0000221,8.29e-08,72;CL:0000362,9.68e-08,9;CL:0000068,3.80e-07,3;CL:0000069,3.80e-07,3;CL:0000307,3.80e-07,3;CL:0000377,3.80e-07,3;CL:0002328,4.40e-07,3;CL:0002077,5.80e-07,34 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.11e-10;82!CL:0000357;1.51e-08;6!CL:0000114;1.51e-08;6!UBERON:0006215;3.50e-08;3!CL:0000377;4.21e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.82e-36!57;UBERON:0005068!2.82e-36!57;UBERON:0006241!2.82e-36!57;UBERON:0007135!2.82e-36!57;UBERON:0002346!8.73e-33!90;UBERON:0000073!2.29e-32!94;UBERON:0001016!2.29e-32!94;UBERON:0000924!3.85e-32!173;UBERON:0006601!3.85e-32!173;UBERON:0002780!2.60e-31!41;UBERON:0001890!2.60e-31!41;UBERON:0006240!2.60e-31!41;UBERON:0001017!4.48e-31!82;UBERON:0003080!3.04e-30!42;UBERON:0003075!5.43e-30!86;UBERON:0007284!5.43e-30!86;UBERON:0005743!5.46e-30!86;UBERON:0002616!8.53e-30!59;UBERON:0004121!1.15e-29!169;UBERON:0001893!1.38e-27!34;UBERON:0007023!2.10e-27!115;UBERON:0002020!3.14e-27!34;UBERON:0003528!3.14e-27!34;UBERON:0000955!1.21e-26!69;UBERON:0006238!1.21e-26!69;UBERON:0001869!1.31e-26!32;UBERON:0002791!1.84e-26!33;UBERON:0003056!1.04e-24!61;UBERON:0000033!1.21e-23!123;UBERON:0000153!3.16e-23!129;UBERON:0007811!3.16e-23!129;UBERON:0002619!1.62e-22!22;UBERON:0001950!9.75e-21!20;UBERON:0000956!6.21e-19!25;UBERON:0000203!6.21e-19!25;UBERON:0002420!1.20e-10!9;UBERON:0007245!1.20e-10!9;UBERON:0010009!1.20e-10!9;UBERON:0010011!1.20e-10!9;UBERON:0000454!1.20e-10!9;UBERON:0002308!7.61e-10!9;UBERON:0000125!7.61e-10!9;UBERON:0009663!1.27e-08!7;UBERON:0000200!2.35e-08!6;UBERON:0003076!1.95e-07!15;UBERON:0003057!1.95e-07!15;UBERON:0000475!2.58e-07!365;UBERON:0001871!3.25e-07!7;UBERON:0001872!8.32e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.84e-40;32!UBERON:0002791;1.57e-37;32!UBERON:0002619;7.72e-37;22!UBERON:0003528;1.03e-36;34!UBERON:0002020;1.03e-36;34!UBERON:0001893;1.98e-36;34!UBERON:0001950;1.21e-33;20!UBERON:0002780;5.68e-32;41!UBERON:0001890;5.68e-32;41!UBERON:0000956;7.82e-32;25!UBERON:0000203;7.82e-32;25!UBERON:0000073;1.03e-28;53!UBERON:0002616;1.03e-28;53!UBERON:0000955;1.62e-19;68!UBERON:0001017;3.46e-17;75!UBERON:0001016;4.32e-16;83!UBERON:0002420;4.31e-15;9!UBERON:0007245;4.31e-15;9!UBERON:0010009;4.31e-15;9!UBERON:0010011;4.31e-15;9!UBERON:0000454;4.31e-15;9!UBERON:0000200;1.02e-13;6!UBERON:0009663;1.26e-11;7!UBERON:0000125;1.68e-11;9!UBERON:0002308;1.68e-11;9!UBERON:0001872;4.74e-11;5!UBERON:0002021;1.29e-10;5!UBERON:0000369;1.75e-10;4!UBERON:0002435;1.75e-10;4!UBERON:0000204;1.75e-10;4!UBERON:0000349;1.83e-10;5!UBERON:0005383;2.81e-08;3!UBERON:0005382;2.81e-08;3!UBERON:0004733;4.99e-08;12!UBERON:0002028;4.99e-08;12!UBERON:0001870;7.45e-08;3!UBERON:0001871;8.14e-08;6!UBERON:0007023;2.38e-07;114!UBERON:0004732;2.56e-07;13!UBERON:0004815;4.49e-07;3!UBERON:0002031;4.49e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.59e-50,53;UBERON:0002616,1.59e-50,53;UBERON:0001049,3.20e-47,56;UBERON:0005068,3.20e-47,56;UBERON:0006241,3.20e-47,56;UBERON:0007135,3.20e-47,56;UBERON:0001016,4.04e-46,89;UBERON:0001869,3.48e-45,32;UBERON:0002780,4.00e-44,41;UBERON:0001890,4.00e-44,41;UBERON:0003080,4.00e-44,41;UBERON:0006240,4.00e-44,41;UBERON:0001893,4.35e-42,34;UBERON:0002791,1.32e-41,32;UBERON:0003528,1.42e-41,34;UBERON:0002020,1.42e-41,34;UBERON:0001017,6.19e-41,81;UBERON:0000955,7.82e-41,68;UBERON:0006238,7.82e-41,68;UBERON:0002619,1.71e-36,22;UBERON:0010371,2.40e-35,104;UBERON:0002346,2.08e-33,86;UBERON:0001950,2.56e-33,20;UBERON:0004121,2.33e-32,171;UBERON:0000924,2.33e-32,171;UBERON:0006601,2.33e-32,171;UBERON:0000956,1.56e-31,25;UBERON:0000203,1.56e-31,25;UBERON:0003075,1.91e-30,82;UBERON:0007284,1.91e-30,82;UBERON:0003056,1.22e-28,61;UBERON:0007023,1.62e-20,114;UBERON:0011216,2.60e-18,223;UBERON:0010314,1.01e-17,132;UBERON:0002420,4.50e-15,9;UBERON:0007245,4.50e-15,9;UBERON:0010009,4.50e-15,9;UBERON:0010011,4.50e-15,9;UBERON:0000454,4.50e-15,9;UBERON:0000200,1.23e-13,6;UBERON:0009663,1.64e-11,7;UBERON:0000125,2.43e-11,9;UBERON:0002308,2.43e-11,9;UBERON:0001872,6.80e-11,5;UBERON:0000349,1.46e-10,5;UBERON:0000369,1.72e-10,4;UBERON:0002435,1.72e-10,4;UBERON:0000204,1.72e-10,4;UBERON:0010082,1.72e-10,4;UBERON:0002021,1.87e-10,5;UBERON:0000025,8.70e-09,192;UBERON:0005383,2.82e-08,3;UBERON:0005382,2.82e-08,3;UBERON:0004733,5.18e-08,12;UBERON:0002028,5.18e-08,12;UBERON:0007277,5.18e-08,12;UBERON:0001871,7.53e-08,6;UBERON:0001870,9.12e-08,3;UBERON:0004732,2.65e-07,13;UBERON:0004815,4.40e-07,3;UBERON:0002031,4.40e-07,3;UBERON:0000922,9.45e-07,592 | |||
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| ||
|short_description=p1@GLB1L3 | |short_description=p1@GLB1L3 | ||
}} | }} |
Latest revision as of 20:35, 16 September 2015
Short description: | p1@GLB1L3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLB1L3_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_NM_001080407, uc009zdf.2, uc010scs.1_5end |
EntrezGene: | GLB1L3 |
HGNC: | 25147 |
UniProt: | Q8NCI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.95e-14 | 13 |
embryonic stem cell | 1.95e-10 | 5 |
keratinocyte | 3.11e-10 | 5 |
stratified squamous epithelial cell | 1.86e-08 | 6 |
keratin accumulating cell | 1.86e-08 | 6 |
stratified epithelial cell | 1.86e-08 | 6 |
keratinizing barrier epithelial cell | 1.86e-08 | 6 |
epithelial fate stem cell | 1.86e-08 | 6 |
stratified epithelial stem cell | 1.86e-08 | 6 |
surface ectodermal cell | 1.86e-08 | 6 |
epithelial cell of tracheobronchial tree | 4.22e-08 | 9 |
epithelial cell of lower respiratory tract | 4.22e-08 | 9 |
general ecto-epithelial cell | 4.68e-08 | 14 |
ectodermal cell | 8.29e-08 | 72 |
epidermal cell | 9.68e-08 | 9 |
duct epithelial cell | 3.80e-07 | 3 |
branched duct epithelial cell | 3.80e-07 | 3 |
tracheal epithelial cell | 3.80e-07 | 3 |
tracheoblast | 3.80e-07 | 3 |
bronchial epithelial cell | 4.40e-07 | 3 |
ecto-epithelial cell | 5.80e-07 | 34 |