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FFCP PHASE1:Mm9::chr1:186823878..186823891,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=226778
|EntrezGene=226778
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8VHJ5,Q14DQ3,C9K101
|UniProt=Q8VHJ5,Q14DQ3,C9K101
|association_with_transcript=-450bp_to_ENSMUST00000027929,NM_145515,uc007dyt.2,uc011wxy.1_5end
|association_with_transcript=-450bp_to_ENSMUST00000027929,NM_145515,uc007dyt.2,uc011wxy.1_5end
|cluster_id=chr1:186823878..186823891,-
|description=CAGE_peak_2_at_Mark1_5end
|description=CAGE_peak_2_at_Mark1_5end
|id=chr1:186823878..186823891,-
|id=chr1:186823878..186823891,-
|ontology_enrichment_celltype=CL:0000117!9.93e-15!23;CL:0000337!9.93e-15!23;CL:0000540!2.58e-09!33;CL:0000047!2.58e-09!33;CL:0000031!2.58e-09!33;CL:0000404!2.58e-09!33;CL:0000393!3.09e-09!39;CL:0000211!3.09e-09!39
|ontology_enrichment_celltype=CL:0000117!9.93e-15!23;CL:0000337!9.93e-15!23;CL:0000540!2.58e-09!33;CL:0000047!2.58e-09!33;CL:0000031!2.58e-09!33;CL:0000404!2.58e-09!33;CL:0000393!3.09e-09!39;CL:0000211!3.09e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,3.27e-28,23;CL:0000337,3.27e-28,23;CL:0000393,4.26e-18,39;CL:0000211,4.26e-18,39;CL:0000540,4.33e-18,33;CL:0000047,4.33e-18,33;CL:0000031,4.33e-18,33;CL:0000404,4.33e-18,33;CL:0002319,1.04e-12,43;CL:0000221,2.61e-12,44;CL:0000133,2.61e-12,44;CL:0002609,6.58e-12,6;CL:0002321,1.06e-07,70;CL:0000120,1.38e-07,3;CL:0002613,1.45e-07,3;CL:0002612,3.91e-07,3;CL:0002608,7.08e-07,3
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!1.56e-21!52;UBERON:0005068!1.56e-21!52;UBERON:0006241!1.56e-21!52;UBERON:0007135!1.56e-21!52;UBERON:0000955!8.37e-21!50;UBERON:0006238!8.37e-21!50;UBERON:0002616!4.69e-20!49;UBERON:0000033!8.50e-20!63;UBERON:0001017!3.35e-19!73;UBERON:0005743!3.35e-19!73;UBERON:0002346!4.68e-19!71;UBERON:0003075!4.68e-19!71;UBERON:0007284!4.68e-19!71;UBERON:0000073!2.10e-18!75;UBERON:0001016!2.10e-18!75;UBERON:0004121!9.52e-18!102;UBERON:0000924!9.52e-18!102;UBERON:0006601!9.52e-18!102;UBERON:0002020!1.15e-17!34;UBERON:0003080!5.95e-17!40;UBERON:0003056!1.32e-16!49;UBERON:0002780!2.32e-16!39;UBERON:0001890!2.32e-16!39;UBERON:0006240!2.32e-16!39;UBERON:0002791!2.47e-15!29;UBERON:0003528!2.47e-15!29;UBERON:0001893!2.47e-15!29;UBERON:0007811!2.15e-10!86;UBERON:0000956!2.95e-10!21;UBERON:0001869!2.95e-10!21;UBERON:0000203!2.95e-10!21;UBERON:0004111!4.62e-10!122;UBERON:0000025!9.96e-10!114;UBERON:0000153!2.12e-09!94;UBERON:0002619!7.67e-08!17
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.06e-29,54;UBERON:0001049,3.85e-29,52;UBERON:0005068,3.85e-29,52;UBERON:0006241,3.85e-29,52;UBERON:0007135,3.85e-29,52;UBERON:0001017,4.60e-29,73;UBERON:0002020,7.16e-29,34;UBERON:0001016,4.77e-28,75;UBERON:0000955,4.34e-26,47;UBERON:0006238,4.34e-26,47;UBERON:0003528,1.01e-25,29;UBERON:0002791,1.01e-25,29;UBERON:0001893,1.01e-25,29;UBERON:0003080,7.11e-25,40;UBERON:0002616,1.74e-24,46;UBERON:0002780,1.67e-23,39;UBERON:0001890,1.67e-23,39;UBERON:0006240,1.67e-23,39;UBERON:0002346,3.44e-22,64;UBERON:0003075,3.44e-22,64;UBERON:0007284,3.44e-22,64;UBERON:0004121,1.09e-21,95;UBERON:0000924,1.09e-21,95;UBERON:0006601,1.09e-21,95;UBERON:0010371,5.33e-20,73;UBERON:0003056,4.27e-19,49;UBERON:0000956,3.16e-15,21;UBERON:0001869,3.16e-15,21;UBERON:0000203,3.16e-15,21;UBERON:0010314,4.63e-13,92;UBERON:0002420,3.31e-12,8;UBERON:0007245,3.31e-12,8;UBERON:0010009,3.31e-12,8;UBERON:0010011,3.31e-12,8;UBERON:0000454,3.31e-12,8;UBERON:0000025,6.10e-12,114;UBERON:0000369,2.41e-11,5;UBERON:0002435,2.41e-11,5;UBERON:0000204,2.41e-11,5;UBERON:0010082,2.41e-11,5;UBERON:0004111,1.29e-10,122;UBERON:0002619,1.15e-09,17;UBERON:0002257,3.91e-07,3;UBERON:0001954,5.70e-07,7;UBERON:0003022,5.70e-07,7;UBERON:0002421,5.70e-07,7;UBERON:0000349,5.70e-07,7;UBERON:0002600,5.70e-07,7
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,1.11514624341466,2.0190142737785,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,4.24864567805155,4.7609188134483,2.53532561402472,0.338844532069132,0,0,0,0,0,0,1.8664130215526,1.62007125998029,1.47227472945967,0.285650984403804,0.441737081903227,1.5923803897944,1.72521847832825,2.75765635983006,1.10115880999389,0.766124028511126,1.0752457327937,3.82470234417562,4.11694396210843,3.12548022334056,1.11673199600552,0.56276261003168,1.22238598221448,2.06240009831567,1.70846016958924,4.28718725398191,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0.433798070759735,0,0.485300549842228,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.19832511523858,2.28750301409313,3.39266750704734,1.21677024134594,2.30143911597297,1.24672826735736,0.648965052271031,0.407357455401265,0,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0.30140963567143,0.816437989815934,0.12811372028485,0.281105173679186,0.517406741478031,0.431135985865684,0.378212160335639,0,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.05144974282064,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0,0,0,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,2.87536413054709,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,0.472905432318573,0.8858587585951,0.956728611944923,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,0.820481806145422,0.163934945376675,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0,0,0,2.57057053137446,0.425820255624806,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,1.06404140185364,0.535106452806212,1.15184314421485,0.304464949114599,0,0.21183207086382,0.441056796109924,1.31909002353184,0.322928853391811,0.482503399425247,0.119372344003136,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0.518459893167171,0,0.56369293868419,0.299033092087958,0.165458490457098,0,0.258319646955462,0.675824501963113,0.234714477291508,0.13020438484395,0,0.241584120826006,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0.221985953374065,0.179427713218951,0,0.386379188064381,0,0.183151624267265,0,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,1.35942722695261,0.51776031175182,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,0.419226325255965,1.2869045591501,0.222246727801615,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.468207537349412,0.448176066834085,0.689225627467359,0,1.0429589335037,0.578727661391115,0.412085900803307,0.735994600671987,0,0.532427418478012,0.476872379894642,0.581385666529314,0.846984423737976,0.507687647350059,0.73171189149109,0,0.271608227691724,1.12228454331548,0.830445126869219,0.985044823755635,1.22769312950907,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0,0.220591419119515,0.695603506861264
|phase1_expression=0.160148847104794,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,1.11514624341466,2.0190142737785,0.782391344348039,0,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0.286533439938757,0,4.24864567805155,4.7609188134483,2.53532561402472,0.338844532069132,0,0,0,0,0,0,1.8664130215526,1.62007125998029,1.47227472945967,0.285650984403804,0.441737081903227,1.5923803897944,1.72521847832825,2.75765635983006,1.10115880999389,0.766124028511126,1.0752457327937,3.82470234417562,4.11694396210843,3.12548022334056,1.11673199600552,0.56276261003168,1.22238598221448,2.06240009831567,1.70846016958924,4.28718725398191,0.151452386666368,0,0,0,0,0,0,0,0.140444420131752,0.170430322578058,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.742210695324124,0.173485326766136,0.304465478312141,0.230615497256059,0,0,0.251333182659351,0.247194967734374,0.433798070759735,0,0.485300549842228,0,0,0,1.17112318804619,1.04723353406728,0,0,0,0,1.19832511523858,2.28750301409313,3.39266750704734,1.21677024134594,2.30143911597297,1.24672826735736,0.648965052271031,0.407357455401265,0,0.252722758433675,0.210441855886474,0.390361328888111,0,0.180062129805349,0.30140963567143,0.816437989815934,0.12811372028485,0.281105173679186,0.517406741478031,0.431135985865684,0.378212160335639,0,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,0.207125772535502,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0,0.164167464079095,0.0810688095458557,0,0,0.134206418760372,1.05144974282064,2.36680608472354,0,0,0,0.232236671860439,0.128867461322093,0,0.22237804384487,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.203651327845314,0,0.140271639780637,0.379419222745544,0,0,0,0.296452627087149,0.166845105716094,0,0,0.202860121388503,0,0,0,0.162135226775035,0.274561413188081,2.87536413054709,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.585400943573396,0.472905432318573,0.8858587585951,0.956728611944923,0,0.345369963731791,0.144649058581512,0,0,0,0,0.642202359951168,0.820481806145422,0.163934945376675,0,0.315508219416257,0,0,0,0.445597348164788,0.283076530788832,0,0,0,2.57057053137446,0.425820255624806,0.178065603667255,0.325773918707152,0.494910368917606,0,0,0,0.188605079755898,0.295301892880773,0,0.258428293168221,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.428674070063185,1.06404140185364,0.535106452806212,1.15184314421485,0.304464949114599,0,0.21183207086382,0.441056796109924,1.31909002353184,0.322928853391811,0.482503399425247,0.119372344003136,0,0.291480836629851,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.134864346384821,0.165306911450672,0,0.518459893167171,0,0.56369293868419,0.299033092087958,0.165458490457098,0,0.258319646955462,0.675824501963113,0.234714477291508,0.13020438484395,0,0.241584120826006,0,0,0.405450430580328,0.308132871494482,0.129920822977795,0.179026695667481,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0,0.680191150845634,0.221985953374065,0.179427713218951,0,0.386379188064381,0,0.183151624267265,0,0.501572104035363,1.12950368523413,0.460325236507177,0.572895513439397,1.3748254587495,0.685082519770642,1.5107877947794,2.02506750069542,0.900642406448441,1.35942722695261,0.51776031175182,0.207574695168353,1.19707462020309,0.341467211508268,0.486213434136588,0.419226325255965,1.2869045591501,0.222246727801615,0.412070114477788,0.64183841918363,1.01078884705519,0.760437899670719,0.377252682772152,0.468207537349412,0.448176066834085,0.689225627467359,0,1.0429589335037,0.578727661391115,0.412085900803307,0.735994600671987,0,0.532427418478012,0.476872379894642,0.581385666529314,0.846984423737976,0.507687647350059,0.73171189149109,0,0.271608227691724,1.12228454331548,0.830445126869219,0.985044823755635,1.22769312950907,0.154936841185966,0.578719832943424,0,0,0.214871054048298,0,0.220591419119515,0.695603506861264
|short_description=p2@Mark1
|short_description=p2@Mark1
}}
}}

Latest revision as of 23:07, 26 September 2015

Short description:p2@Mark1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Mark1_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: -450bp_to_ENSMUST00000027929, NM_145515, uc007dyt.2, uc011wxy.1_5end
EntrezGene:Mark1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Mark1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.12
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B32.02
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.25
Mouse Granule cells, donor2.CNhs12357.11731-123E34.76
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.29
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.44
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.73
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.08
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.82
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.12
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.13
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.12
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.22
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D62.06
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.29
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.74
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F13.39
cortex, adult.CNhs10473.12-14D51.22
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.82
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.28
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.05
hippocampus, neonate N00.CNhs11228.627-43G12.37
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.89
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.82
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.49
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B91.06
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.48
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.17
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.56
testis, embryo E13.CNhs11031.389-23F50.30
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.68
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.08
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.39
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.21
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.01
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.45
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.06e-2954
neural tube3.85e-2952
neural rod3.85e-2952
future spinal cord3.85e-2952
neural keel3.85e-2952
central nervous system4.60e-2973
gray matter7.16e-2934
nervous system4.77e-2875
brain4.34e-2647
future brain4.34e-2647
brain grey matter1.01e-2529
regional part of telencephalon1.01e-2529
telencephalon1.01e-2529
anterior neural tube7.11e-2540
regional part of brain1.74e-2446
regional part of forebrain1.67e-2339
forebrain1.67e-2339
future forebrain1.67e-2339
neurectoderm3.44e-2264
neural plate3.44e-2264
presumptive neural plate3.44e-2264
ectoderm-derived structure1.09e-2195
ectoderm1.09e-2195
presumptive ectoderm1.09e-2195
ecto-epithelium5.33e-2073
pre-chordal neural plate4.27e-1949
cerebral cortex3.16e-1521
cerebral hemisphere3.16e-1521
pallium3.16e-1521
structure with developmental contribution from neural crest4.63e-1392
basal ganglion3.31e-128
nuclear complex of neuraxis3.31e-128
aggregate regional part of brain3.31e-128
collection of basal ganglia3.31e-128
cerebral subcortex3.31e-128
tube6.10e-12114
corpus striatum2.41e-115
striatum2.41e-115
ventral part of telencephalon2.41e-115
future corpus striatum2.41e-115
anatomical conduit1.29e-10122
regional part of cerebral cortex1.15e-0917
ventral horn of spinal cord3.91e-073
Ammon's horn5.70e-077
lobe parts of cerebral cortex5.70e-077
hippocampal formation5.70e-077
limbic system5.70e-077
limbic lobe5.70e-077
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