FFCP PHASE1:Mm9::chr7:70589627..70589648,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=170711|HGNC=|MCL_coexpression_id=121|UniProt=Q8R554|association_with_transcript=0bp_to_ENSMUST00000058476_5end|description=CAGE_peak_3_at_Otud7a_5end|id=chr7:70589627..70589648,+|ontology_enrichment_celltype=CL:0000117!2.69e-18!23;CL:0000337!2.69e-18!23;CL:0000540!1.96e-14!33;CL:0000047!1.96e-14!33;CL:0000031!1.96e-14!33;CL:0000404!1.96e-14!33;CL:0002319!5.74e-12!43;CL:0000221!1.67e-11!44;CL:0000133!1.67e-11!44;CL:0000393!5.22e-11!39;CL:0000211!5.22e-11!39;CL:0000055!3.83e-09!50|ontology_enrichment_celltype_v019_2=CL:0002610,4.02e-14,3;CL:0002614,5.99e-14,3;CL:0000117,3.14e-11,23;CL:0000337,3.14e-11,23;CL:0000540,1.70e-07,33;CL:0000047,1.70e-07,33;CL:0000031,1.70e-07,33;CL:0000404,1.70e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.92e-25!75;UBERON:0001016!1.92e-25!75;UBERON:0001017!2.25e-24!73;UBERON:0005743!2.25e-24!73;UBERON:0001049!1.12e-23!52;UBERON:0005068!1.12e-23!52;UBERON:0006241!1.12e-23!52;UBERON:0007135!1.12e-23!52;UBERON:0002346!1.38e-22!71;UBERON:0003075!1.38e-22!71;UBERON:0007284!1.38e-22!71;UBERON:0000033!1.51e-22!63;UBERON:0000955!2.64e-22!50;UBERON:0006238!2.64e-22!50;UBERON:0002616!2.78e-21!49;UBERON:0004121!4.07e-21!102;UBERON:0000924!4.07e-21!102;UBERON:0006601!4.07e-21!102;UBERON:0002020!9.78e-16!34;UBERON:0003056!1.98e-15!49;UBERON:0003080!3.54e-14!40;UBERON:0002780!2.52e-13!39;UBERON:0001890!2.52e-13!39;UBERON:0006240!2.52e-13!39;UBERON:0007811!7.85e-13!86;UBERON:0002791!1.86e-11!29;UBERON:0003528!1.86e-11!29;UBERON:0001893!1.86e-11!29;UBERON:0003076!5.45e-11!12;UBERON:0003057!5.45e-11!12;UBERON:0000153!1.22e-10!94;UBERON:0002420!7.84e-10!8;UBERON:0007245!7.84e-10!8;UBERON:0010009!7.84e-10!8;UBERON:0010011!7.84e-10!8;UBERON:0000454!7.84e-10!8;UBERON:0002298!4.48e-08!6;UBERON:0002240!2.97e-07!6;UBERON:0005174!2.97e-07!6;UBERON:0001137!2.97e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.06e-20,54;UBERON:0001017,2.13e-18,73;UBERON:0001016,7.89e-18,75;UBERON:0001049,5.18e-16,52;UBERON:0005068,5.18e-16,52;UBERON:0006241,5.18e-16,52;UBERON:0007135,5.18e-16,52;UBERON:0000955,1.91e-15,47;UBERON:0006238,1.91e-15,47;UBERON:0004684,4.02e-14,3;UBERON:0002275,4.02e-14,3;UBERON:0002038,5.99e-14,3;UBERON:0009663,5.99e-14,3;UBERON:0009661,5.99e-14,3;UBERON:0000125,5.99e-14,3;UBERON:0002308,5.99e-14,3;UBERON:0002420,1.51e-13,8;UBERON:0007245,1.51e-13,8;UBERON:0010009,1.51e-13,8;UBERON:0010011,1.51e-13,8;UBERON:0000454,1.51e-13,8;UBERON:0002616,1.52e-13,46;UBERON:0004121,1.91e-13,95;UBERON:0000924,1.91e-13,95;UBERON:0006601,1.91e-13,95;UBERON:0002346,1.56e-12,64;UBERON:0003075,1.56e-12,64;UBERON:0007284,1.56e-12,64;UBERON:0003076,1.75e-12,12;UBERON:0003057,1.75e-12,12;UBERON:0004733,9.51e-12,6;UBERON:0004732,9.51e-12,6;UBERON:0002028,9.51e-12,6;UBERON:0007277,9.51e-12,6;UBERON:0010371,1.13e-10,73;UBERON:0002950,1.38e-10,4;UBERON:0001891,1.38e-10,4;UBERON:0009616,1.38e-10,4;UBERON:0010286,1.38e-10,4;UBERON:0001896,6.93e-09,2;UBERON:0002298,6.93e-09,2;UBERON:0005290,6.93e-09,2;UBERON:0010096,6.93e-09,2;UBERON:0010314,6.23e-08,92;UBERON:0002780,1.50e-07,39;UBERON:0001890,1.50e-07,39;UBERON:0006240,1.50e-07,39;UBERON:0003080,2.49e-07,40;UBERON:0002020,5.14e-07,34|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.420649922702764,2.28520787523043,0.662605622854841,0.122490799214954,0.479227355091182,0,2.20231761998777,3.19218345212969,3.68655679814984,0.263772575460388,0.731901148819277,1.56274011167028,2.23346399201105,2.8138130501584,2.59757021220577,0.883885756421003,0.427115042397309,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,6.14839673724249,4.60782754989601,0,0,0,0,0.898743836428936,2.74500361691176,0.879580464790051,1.56441888173049,1.79000820131231,1.87009240103604,1.94689515681309,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.340182495756639,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0.572895513439397,1.03111909406213,0,0,0,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421|short_description=p3@Otud7a}} | ||
|EntrezGene=170711 | |||
|HGNC= | |||
|MCL_coexpression_id=121 | |||
|UniProt=Q8R554 | |||
|association_with_transcript=0bp_to_ENSMUST00000058476_5end | |||
|description=CAGE_peak_3_at_Otud7a_5end | |||
|id=chr7:70589627..70589648,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.69e-18!23;CL:0000337!2.69e-18!23;CL:0000540!1.96e-14!33;CL:0000047!1.96e-14!33;CL:0000031!1.96e-14!33;CL:0000404!1.96e-14!33;CL:0002319!5.74e-12!43;CL:0000221!1.67e-11!44;CL:0000133!1.67e-11!44;CL:0000393!5.22e-11!39;CL:0000211!5.22e-11!39;CL:0000055!3.83e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,4.02e-14,3;CL:0002614,5.99e-14,3;CL:0000117,3.14e-11,23;CL:0000337,3.14e-11,23;CL:0000540,1.70e-07,33;CL:0000047,1.70e-07,33;CL:0000031,1.70e-07,33;CL:0000404,1.70e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.92e-25!75;UBERON:0001016!1.92e-25!75;UBERON:0001017!2.25e-24!73;UBERON:0005743!2.25e-24!73;UBERON:0001049!1.12e-23!52;UBERON:0005068!1.12e-23!52;UBERON:0006241!1.12e-23!52;UBERON:0007135!1.12e-23!52;UBERON:0002346!1.38e-22!71;UBERON:0003075!1.38e-22!71;UBERON:0007284!1.38e-22!71;UBERON:0000033!1.51e-22!63;UBERON:0000955!2.64e-22!50;UBERON:0006238!2.64e-22!50;UBERON:0002616!2.78e-21!49;UBERON:0004121!4.07e-21!102;UBERON:0000924!4.07e-21!102;UBERON:0006601!4.07e-21!102;UBERON:0002020!9.78e-16!34;UBERON:0003056!1.98e-15!49;UBERON:0003080!3.54e-14!40;UBERON:0002780!2.52e-13!39;UBERON:0001890!2.52e-13!39;UBERON:0006240!2.52e-13!39;UBERON:0007811!7.85e-13!86;UBERON:0002791!1.86e-11!29;UBERON:0003528!1.86e-11!29;UBERON:0001893!1.86e-11!29;UBERON:0003076!5.45e-11!12;UBERON:0003057!5.45e-11!12;UBERON:0000153!1.22e-10!94;UBERON:0002420!7.84e-10!8;UBERON:0007245!7.84e-10!8;UBERON:0010009!7.84e-10!8;UBERON:0010011!7.84e-10!8;UBERON:0000454!7.84e-10!8;UBERON:0002298!4.48e-08!6;UBERON:0002240!2.97e-07!6;UBERON:0005174!2.97e-07!6;UBERON:0001137!2.97e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.06e-20,54;UBERON:0001017,2.13e-18,73;UBERON:0001016,7.89e-18,75;UBERON:0001049,5.18e-16,52;UBERON:0005068,5.18e-16,52;UBERON:0006241,5.18e-16,52;UBERON:0007135,5.18e-16,52;UBERON:0000955,1.91e-15,47;UBERON:0006238,1.91e-15,47;UBERON:0004684,4.02e-14,3;UBERON:0002275,4.02e-14,3;UBERON:0002038,5.99e-14,3;UBERON:0009663,5.99e-14,3;UBERON:0009661,5.99e-14,3;UBERON:0000125,5.99e-14,3;UBERON:0002308,5.99e-14,3;UBERON:0002420,1.51e-13,8;UBERON:0007245,1.51e-13,8;UBERON:0010009,1.51e-13,8;UBERON:0010011,1.51e-13,8;UBERON:0000454,1.51e-13,8;UBERON:0002616,1.52e-13,46;UBERON:0004121,1.91e-13,95;UBERON:0000924,1.91e-13,95;UBERON:0006601,1.91e-13,95;UBERON:0002346,1.56e-12,64;UBERON:0003075,1.56e-12,64;UBERON:0007284,1.56e-12,64;UBERON:0003076,1.75e-12,12;UBERON:0003057,1.75e-12,12;UBERON:0004733,9.51e-12,6;UBERON:0004732,9.51e-12,6;UBERON:0002028,9.51e-12,6;UBERON:0007277,9.51e-12,6;UBERON:0010371,1.13e-10,73;UBERON:0002950,1.38e-10,4;UBERON:0001891,1.38e-10,4;UBERON:0009616,1.38e-10,4;UBERON:0010286,1.38e-10,4;UBERON:0001896,6.93e-09,2;UBERON:0002298,6.93e-09,2;UBERON:0005290,6.93e-09,2;UBERON:0010096,6.93e-09,2;UBERON:0010314,6.23e-08,92;UBERON:0002780,1.50e-07,39;UBERON:0001890,1.50e-07,39;UBERON:0006240,1.50e-07,39;UBERON:0003080,2.49e-07,40;UBERON:0002020,5.14e-07,34 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.202316460859598,0,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.420649922702764,2.28520787523043,0.662605622854841,0.122490799214954,0.479227355091182,0,2.20231761998777,3.19218345212969,3.68655679814984,0.263772575460388,0.731901148819277,1.56274011167028,2.23346399201105,2.8138130501584,2.59757021220577,0.883885756421003,0.427115042397309,0.372798891650601,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,6.14839673724249,4.60782754989601,0,0,0,0,0.898743836428936,2.74500361691176,0.879580464790051,1.56441888173049,1.79000820131231,1.87009240103604,1.94689515681309,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0.340182495756639,0,0.281105173679186,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0.420579897128254,0.411618449517138,0,0,0.213288250535234,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12385412991454,1.05490517932983,0,0,0,0,0.215423397732799,0.238968797952552,0,0,0,0,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0.220528398054962,0,0,0,0,0,0,1.66882771809459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0.117357238645754,0,0,0,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0,0.572895513439397,1.03111909406213,0,0,0,0.900642406448441,0,0.51776031175182,0,0,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0.377252682772152,0.0936415074698824,0.128050304809739,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.135804113845862,0.561142271657738,0.118635018124174,0.29551344712669,0,0,0,0.249810577937946,0,0,0,0.220591419119515,0.231867835620421 | |||
|short_description=p3@Otud7a | |||
}} |
Revision as of 14:02, 14 September 2013
Short description: | p3@Otud7a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Otud7a_5end |
Coexpression cluster: | MCL_coexpression_mm9:121 |
Association with transcript: | 0bp_to_ENSMUST00000058476_5end |
EntrezGene: | Otud7a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 4.02e-14 | 3 |
neuron of the substantia nigra | 5.99e-14 | 3 |
CNS neuron (sensu Vertebrata) | 3.14e-11 | 23 |
neuroblast (sensu Vertebrata) | 3.14e-11 | 23 |
neuron | 1.70e-07 | 33 |
neuronal stem cell | 1.70e-07 | 33 |
neuroblast | 1.70e-07 | 33 |
electrically signaling cell | 1.70e-07 | 33 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.