FFCP PHASE1:Mm9::chr11:104189552..104189556,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=87|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:104189552..104189556,-|id=chr11:104189552..104189556,-|ontology_enrichment_celltype=CL:0000117!1.06e-20!23;CL:0000337!1.06e-20!23;CL:0000540!4.09e-17!33;CL:0000047!4.09e-17!33;CL:0000031!4.09e-17!33;CL:0000404!4.09e-17!33;CL:0000393!1.09e-13!39;CL:0000211!1.09e-13!39;CL:0000221!1.32e-12!44;CL:0000133!1.32e-12!44;CL:0002319!1.99e-12!43;CL:0000055!7.46e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-59,23;CL:0000337,7.76e-59,23;CL:0000540,8.63e-40,33;CL:0000047,8.63e-40,33;CL:0000031,8.63e-40,33;CL:0000404,8.63e-40,33;CL:0000393,4.83e-33,39;CL:0000211,4.83e-33,39;CL:0002319,1.37e-29,43;CL:0000221,8.02e-29,44;CL:0000133,8.02e-29,44;CL:0002321,1.42e-16,70;CL:0002609,2.69e-13,6;CL:0000723,8.83e-12,91;CL:0000048,8.83e-12,91;CL:0002612,2.63e-11,3;CL:0000120,2.85e-11,3;CL:0000034,8.62e-11,97;CL:0002613,8.91e-11,3;CL:0002608,4.51e-10,3;CL:0002614,6.94e-10,3;CL:0002611,4.07e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.76e-24!73;UBERON:0005743!6.76e-24!73;UBERON:0004121!1.06e-23!102;UBERON:0000924!1.06e-23!102;UBERON:0006601!1.06e-23!102;UBERON:0000073!1.11e-22!75;UBERON:0001016!1.11e-22!75;UBERON:0002346!1.26e-21!71;UBERON:0003075!1.26e-21!71;UBERON:0007284!1.26e-21!71;UBERON:0000033!2.48e-21!63;UBERON:0001049!4.37e-21!52;UBERON:0005068!4.37e-21!52;UBERON:0006241!4.37e-21!52;UBERON:0007135!4.37e-21!52;UBERON:0000955!4.10e-19!50;UBERON:0006238!4.10e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0002020!1.22e-18!34;UBERON:0003056!4.14e-15!49;UBERON:0003080!2.29e-14!40;UBERON:0002791!2.93e-14!29;UBERON:0003528!2.93e-14!29;UBERON:0001893!2.93e-14!29;UBERON:0002780!1.02e-13!39;UBERON:0001890!1.02e-13!39;UBERON:0006240!1.02e-13!39;UBERON:0007811!2.37e-11!86;UBERON:0000153!1.13e-10!94;UBERON:0000956!2.98e-08!21;UBERON:0001869!2.98e-08!21;UBERON:0000203!2.98e-08!21;UBERON:0002420!6.88e-08!8;UBERON:0007245!6.88e-08!8;UBERON:0010009!6.88e-08!8;UBERON:0010011!6.88e-08!8;UBERON:0000454!6.88e-08!8;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.76e-38,34;UBERON:0000073,8.66e-33,54;UBERON:0001017,2.05e-30,73;UBERON:0001016,1.76e-29,75;UBERON:0001049,9.62e-29,52;UBERON:0005068,9.62e-29,52;UBERON:0006241,9.62e-29,52;UBERON:0007135,9.62e-29,52;UBERON:0003528,1.92e-25,29;UBERON:0002791,1.92e-25,29;UBERON:0001893,1.92e-25,29;UBERON:0002346,1.55e-22,64;UBERON:0003075,1.55e-22,64;UBERON:0007284,1.55e-22,64;UBERON:0004121,2.70e-22,95;UBERON:0000924,2.70e-22,95;UBERON:0006601,2.70e-22,95;UBERON:0010371,3.24e-19,73;UBERON:0002420,4.54e-19,8;UBERON:0007245,4.54e-19,8;UBERON:0010009,4.54e-19,8;UBERON:0010011,4.54e-19,8;UBERON:0000454,4.54e-19,8;UBERON:0002616,5.34e-19,46;UBERON:0000955,1.62e-18,47;UBERON:0006238,1.62e-18,47;UBERON:0002780,4.36e-18,39;UBERON:0001890,4.36e-18,39;UBERON:0006240,4.36e-18,39;UBERON:0003080,1.49e-17,40;UBERON:0001948,9.13e-17,5;UBERON:0002315,9.13e-17,5;UBERON:0010314,2.49e-14,92;UBERON:0002240,6.26e-14,6;UBERON:0005174,6.26e-14,6;UBERON:0001137,6.26e-14,6;UBERON:0003056,9.87e-14,49;UBERON:0003076,2.12e-12,12;UBERON:0003057,2.12e-12,12;UBERON:0002257,2.63e-11,3;UBERON:0000956,4.53e-11,21;UBERON:0001869,4.53e-11,21;UBERON:0000203,4.53e-11,21;UBERON:0000369,6.09e-11,5;UBERON:0002435,6.09e-11,5;UBERON:0000204,6.09e-11,5;UBERON:0010082,6.09e-11,5;UBERON:0000025,1.07e-10,114;UBERON:0002038,6.94e-10,3;UBERON:0009663,6.94e-10,3;UBERON:0009661,6.94e-10,3;UBERON:0000125,6.94e-10,3;UBERON:0002308,6.94e-10,3;UBERON:0004111,1.06e-09,122;UBERON:0002619,1.83e-08,17;UBERON:0011216,1.97e-08,194;UBERON:0002950,1.59e-07,4;UBERON:0001891,1.59e-07,4;UBERON:0009616,1.59e-07,4;UBERON:0010286,1.59e-07,4;UBERON:0001954,2.44e-07,7;UBERON:0003022,2.44e-07,7;UBERON:0002421,2.44e-07,7;UBERON:0000349,2.44e-07,7;UBERON:0002600,2.44e-07,7;UBERON:0002256,4.07e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,11.1088105647127,11.4089652631112,0,0,0,0,0,0,0.384218305321555,0.311068836925433,4.86021377994086,1.68259969081106,1.71390590642282,1.32521124570968,1.5923803897944,1.24599112323707,3.67687514644008,1.10115880999389,1.14918604276669,0.614426133024974,1.97829431595291,3.20206752608434,6.25096044668112,1.67509799400829,2.25105044012672,1.22238598221448,8.83885756421003,5.26775218956681,5.03278503728312,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.662524555381181,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.748953197024114,0.457500602818626,2.1361239859187,0.695297280769106,0,0.20778804455956,0.973447578406546,0,0,0,0.210441855886474,0,0.229902104433473,0,0.452114453507145,0.476255494059295,0.384341160854549,0.468508622798644,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.420579897128254,1.3377599609307,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0,1.28440471990234,0.234423373184406,0,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0,0,0.621339313086926,0.56369293868419,0,0,0,0.258319646955462,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,2.29158205375759,2.749650917499,0.685082519770642,0,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.37456602987953,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0,0.354951612318675,0.715308569841963,0.290692833264657,0.752875043322645,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0,0.474540072496697,0.591026894253381,0,0.309873682371932,0,0.999242311751784,0.935726433781634,0,0,0,0|short_description=p@chr11:104189552..104189556,-}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=87 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:104189552..104189556,- | |||
|id=chr11:104189552..104189556,- | |||
|ontology_enrichment_celltype=CL:0000117!1.06e-20!23;CL:0000337!1.06e-20!23;CL:0000540!4.09e-17!33;CL:0000047!4.09e-17!33;CL:0000031!4.09e-17!33;CL:0000404!4.09e-17!33;CL:0000393!1.09e-13!39;CL:0000211!1.09e-13!39;CL:0000221!1.32e-12!44;CL:0000133!1.32e-12!44;CL:0002319!1.99e-12!43;CL:0000055!7.46e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,7.76e-59,23;CL:0000337,7.76e-59,23;CL:0000540,8.63e-40,33;CL:0000047,8.63e-40,33;CL:0000031,8.63e-40,33;CL:0000404,8.63e-40,33;CL:0000393,4.83e-33,39;CL:0000211,4.83e-33,39;CL:0002319,1.37e-29,43;CL:0000221,8.02e-29,44;CL:0000133,8.02e-29,44;CL:0002321,1.42e-16,70;CL:0002609,2.69e-13,6;CL:0000723,8.83e-12,91;CL:0000048,8.83e-12,91;CL:0002612,2.63e-11,3;CL:0000120,2.85e-11,3;CL:0000034,8.62e-11,97;CL:0002613,8.91e-11,3;CL:0002608,4.51e-10,3;CL:0002614,6.94e-10,3;CL:0002611,4.07e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.76e-24!73;UBERON:0005743!6.76e-24!73;UBERON:0004121!1.06e-23!102;UBERON:0000924!1.06e-23!102;UBERON:0006601!1.06e-23!102;UBERON:0000073!1.11e-22!75;UBERON:0001016!1.11e-22!75;UBERON:0002346!1.26e-21!71;UBERON:0003075!1.26e-21!71;UBERON:0007284!1.26e-21!71;UBERON:0000033!2.48e-21!63;UBERON:0001049!4.37e-21!52;UBERON:0005068!4.37e-21!52;UBERON:0006241!4.37e-21!52;UBERON:0007135!4.37e-21!52;UBERON:0000955!4.10e-19!50;UBERON:0006238!4.10e-19!50;UBERON:0002616!1.11e-18!49;UBERON:0002020!1.22e-18!34;UBERON:0003056!4.14e-15!49;UBERON:0003080!2.29e-14!40;UBERON:0002791!2.93e-14!29;UBERON:0003528!2.93e-14!29;UBERON:0001893!2.93e-14!29;UBERON:0002780!1.02e-13!39;UBERON:0001890!1.02e-13!39;UBERON:0006240!1.02e-13!39;UBERON:0007811!2.37e-11!86;UBERON:0000153!1.13e-10!94;UBERON:0000956!2.98e-08!21;UBERON:0001869!2.98e-08!21;UBERON:0000203!2.98e-08!21;UBERON:0002420!6.88e-08!8;UBERON:0007245!6.88e-08!8;UBERON:0010009!6.88e-08!8;UBERON:0010011!6.88e-08!8;UBERON:0000454!6.88e-08!8;UBERON:0003076!1.30e-07!12;UBERON:0003057!1.30e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.76e-38,34;UBERON:0000073,8.66e-33,54;UBERON:0001017,2.05e-30,73;UBERON:0001016,1.76e-29,75;UBERON:0001049,9.62e-29,52;UBERON:0005068,9.62e-29,52;UBERON:0006241,9.62e-29,52;UBERON:0007135,9.62e-29,52;UBERON:0003528,1.92e-25,29;UBERON:0002791,1.92e-25,29;UBERON:0001893,1.92e-25,29;UBERON:0002346,1.55e-22,64;UBERON:0003075,1.55e-22,64;UBERON:0007284,1.55e-22,64;UBERON:0004121,2.70e-22,95;UBERON:0000924,2.70e-22,95;UBERON:0006601,2.70e-22,95;UBERON:0010371,3.24e-19,73;UBERON:0002420,4.54e-19,8;UBERON:0007245,4.54e-19,8;UBERON:0010009,4.54e-19,8;UBERON:0010011,4.54e-19,8;UBERON:0000454,4.54e-19,8;UBERON:0002616,5.34e-19,46;UBERON:0000955,1.62e-18,47;UBERON:0006238,1.62e-18,47;UBERON:0002780,4.36e-18,39;UBERON:0001890,4.36e-18,39;UBERON:0006240,4.36e-18,39;UBERON:0003080,1.49e-17,40;UBERON:0001948,9.13e-17,5;UBERON:0002315,9.13e-17,5;UBERON:0010314,2.49e-14,92;UBERON:0002240,6.26e-14,6;UBERON:0005174,6.26e-14,6;UBERON:0001137,6.26e-14,6;UBERON:0003056,9.87e-14,49;UBERON:0003076,2.12e-12,12;UBERON:0003057,2.12e-12,12;UBERON:0002257,2.63e-11,3;UBERON:0000956,4.53e-11,21;UBERON:0001869,4.53e-11,21;UBERON:0000203,4.53e-11,21;UBERON:0000369,6.09e-11,5;UBERON:0002435,6.09e-11,5;UBERON:0000204,6.09e-11,5;UBERON:0010082,6.09e-11,5;UBERON:0000025,1.07e-10,114;UBERON:0002038,6.94e-10,3;UBERON:0009663,6.94e-10,3;UBERON:0009661,6.94e-10,3;UBERON:0000125,6.94e-10,3;UBERON:0002308,6.94e-10,3;UBERON:0004111,1.06e-09,122;UBERON:0002619,1.83e-08,17;UBERON:0011216,1.97e-08,194;UBERON:0002950,1.59e-07,4;UBERON:0001891,1.59e-07,4;UBERON:0009616,1.59e-07,4;UBERON:0010286,1.59e-07,4;UBERON:0001954,2.44e-07,7;UBERON:0003022,2.44e-07,7;UBERON:0002421,2.44e-07,7;UBERON:0000349,2.44e-07,7;UBERON:0002600,2.44e-07,7;UBERON:0002256,4.07e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0,0.340173160604279,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,0,0,0,0,0,0,0,0.286533439938757,0,2.63011399117477,11.1088105647127,11.4089652631112,0,0,0,0,0,0,0.384218305321555,0.311068836925433,4.86021377994086,1.68259969081106,1.71390590642282,1.32521124570968,1.5923803897944,1.24599112323707,3.67687514644008,1.10115880999389,1.14918604276669,0.614426133024974,1.97829431595291,3.20206752608434,6.25096044668112,1.67509799400829,2.25105044012672,1.22238598221448,8.83885756421003,5.26775218956681,5.03278503728312,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.608930956624282,0,0.301445281105245,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.662524555381181,0,0,0.585561594023094,1.04723353406728,0,0,0,0,0.748953197024114,0.457500602818626,2.1361239859187,0.695297280769106,0,0.20778804455956,0.973447578406546,0,0,0,0.210441855886474,0,0.229902104433473,0,0.452114453507145,0.476255494059295,0.384341160854549,0.468508622798644,0,0,0.189106080167819,0,0,0,0.348252166522167,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492502392237286,0.0810688095458557,0.146199987425332,0.439100230582101,0.134206418760372,0.420579897128254,1.3377599609307,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167506257441816,0,0,0,0,0,0.163863314715738,0,0.723245292907558,0,0,0,0,1.28440471990234,0.234423373184406,0,0.252470927204373,0,0,0.430846795465598,0.238968797952552,0,0,0,0.584511715822624,0.395287777946524,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0,0.535106452806212,0.164549020602121,0.304464949114599,0,0,0,0,0,0,0,0.164140899745061,0,0.18542530201051,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0.436725127492355,0,0,0,0,0.621339313086926,0.56369293868419,0,0,0,0.258319646955462,0,0,0,0,0,0.864090018773596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0,0,0,0,0,3.3885110557024,0.460325236507177,2.29158205375759,2.749650917499,0.685082519770642,0,0,0.900642406448441,0,0.51776031175182,0.207574695168353,0.399024873401031,0.512200817262403,0.972426868273176,0.209613162627982,0,0.222246727801615,0.206035057238894,0,0,0,0,0.37456602987953,0.128050304809739,0.34461281373368,0.476293691283074,0.115884325944855,0.38581844092741,0.824171801606613,0.294397840268795,0,0.354951612318675,0.715308569841963,0.290692833264657,0.752875043322645,0.25384382367503,0.73171189149109,0.526139422875686,0.271608227691724,0,0.474540072496697,0.591026894253381,0,0.309873682371932,0,0.999242311751784,0.935726433781634,0,0,0,0 | |||
|short_description=p@chr11:104189552..104189556,- | |||
}} |
Revision as of 18:27, 12 September 2013
Short description: | p@chr11:104189552..104189556, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104189552..104189556, - |
Coexpression cluster: | MCL_coexpression_mm9:87 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 7.76e-59 | 23 |
neuroblast (sensu Vertebrata) | 7.76e-59 | 23 |
neuron | 8.63e-40 | 33 |
neuronal stem cell | 8.63e-40 | 33 |
neuroblast | 8.63e-40 | 33 |
electrically signaling cell | 8.63e-40 | 33 |
electrically responsive cell | 4.83e-33 | 39 |
electrically active cell | 4.83e-33 | 39 |
neural cell | 1.37e-29 | 43 |
ectodermal cell | 8.02e-29 | 44 |
neurectodermal cell | 8.02e-29 | 44 |
embryonic cell | 1.42e-16 | 70 |
neuron of cerebral cortex | 2.69e-13 | 6 |
somatic stem cell | 8.83e-12 | 91 |
multi fate stem cell | 8.83e-12 | 91 |
neuron of the ventral spinal cord | 2.63e-11 | 3 |
granule cell | 2.85e-11 | 3 |
stem cell | 8.62e-11 | 97 |
striatum neuron | 8.91e-11 | 3 |
hippocampal neuron | 4.51e-10 | 3 |
neuron of the substantia nigra | 6.94e-10 | 3 |
neuron of the dorsal spinal cord | 4.07e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.