FFCP PHASE1:Hg19::chr10:88717312..88717335,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79812|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19888|TSSclassifier=S|UniProt=Q9H8L6|association_with_transcript=36bp_to_ENST00000372027_5end|coexpression_cluster_id=C140|description=CAGE_peak_2_at_MMRN2_5end|id=chr10:88717312..88717335,-|ontology_enrichment_celltype=CL:0002139!2.61e-26!24;CL:0000115!2.98e-24!35;CL:0000071!2.22e-20!18;CL:0002546!2.22e-20!18;CL:0002078!7.58e-17!44;CL:1000413!2.21e-11!9;CL:0000213!1.54e-10!57;CL:0000215!1.54e-10!57;CL:0002544!4.03e-08!6;CL:0002543!5.26e-08!6;CL:0005020!1.78e-07!6;CL:0002138!1.78e-07!6;CL:0005022!1.78e-07!6|ontology_enrichment_celltype_v019=CL:0002139;7.34e-31;24!CL:0000115;7.94e-26;36!CL:0000071;7.93e-24;18!CL:0002078;3.72e-14;45!CL:1000413;3.55e-13;9!CL:0000213;1.04e-09;58!CL:0000215;1.04e-09;58!CL:0002544;2.59e-09;6!CL:0002543;3.52e-09;6!CL:0002138;1.43e-08;6|ontology_enrichment_celltype_v019_2=CL:0002139,7.47e-31,24;CL:0000115,2.63e-30,36;CL:0000071,7.90e-24,18;CL:0002546,7.90e-24,18;CL:0002078,6.50e-22,45;CL:0000213,1.46e-14,58;CL:0000215,1.46e-14,58;CL:1000413,3.55e-13,9;CL:0002544,2.54e-09,6;CL:0002543,3.47e-09,6;CL:0005020,1.46e-08,6;CL:0002138,1.46e-08,6;CL:0005022,1.46e-08,6|ontology_enrichment_development_v019=CL:0002546;7.93e-24;18!CL:0005022;1.43e-08;6!UBERON:0006601;6.68e-08;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.40e-63!115;UBERON:0004111!2.42e-35!241;UBERON:0000025!1.33e-33!194;UBERON:0000477!3.65e-30!286;UBERON:0001049!4.60e-26!57;UBERON:0005068!4.60e-26!57;UBERON:0006241!4.60e-26!57;UBERON:0007135!4.60e-26!57;UBERON:0002616!8.48e-21!59;UBERON:0003075!1.39e-20!86;UBERON:0007284!1.39e-20!86;UBERON:0001986!2.22e-20!18;UBERON:0004638!2.22e-20!18;UBERON:0004852!2.22e-20!18;UBERON:0003080!9.45e-20!42;UBERON:0001017!4.02e-19!82;UBERON:0002346!7.33e-19!90;UBERON:0002780!9.20e-19!41;UBERON:0001890!9.20e-19!41;UBERON:0006240!9.20e-19!41;UBERON:0000119!1.59e-18!312;UBERON:0005743!1.73e-18!86;UBERON:0000483!4.04e-18!309;UBERON:0000955!5.22e-18!69;UBERON:0006238!5.22e-18!69;UBERON:0000073!9.55e-17!94;UBERON:0001016!9.55e-17!94;UBERON:0000055!1.74e-16!69;UBERON:0004872!2.06e-16!84;UBERON:0002020!3.27e-16!34;UBERON:0003528!3.27e-16!34;UBERON:0001893!4.12e-16!34;UBERON:0002791!1.36e-15!33;UBERON:0000487!2.49e-15!22;UBERON:0001869!5.29e-15!32;UBERON:0001009!4.76e-14!113;UBERON:0003914!1.05e-13!118;UBERON:0002619!1.09e-13!22;UBERON:0001981!1.87e-13!60;UBERON:0007500!1.87e-13!60;UBERON:0004537!1.87e-13!60;UBERON:0006965!1.87e-13!60;UBERON:0002049!3.04e-13!79;UBERON:0007798!3.04e-13!79;UBERON:0006914!1.21e-12!25;UBERON:0001950!1.47e-12!20;UBERON:0003056!1.88e-12!61;UBERON:0000956!1.96e-12!25;UBERON:0000203!1.96e-12!25;UBERON:0004535!2.60e-12!110;UBERON:0000468!1.09e-11!659;UBERON:0000467!1.93e-11!625;UBERON:0003915!2.21e-11!9;UBERON:0004700!2.21e-11!9;UBERON:0001917!2.21e-11!9;UBERON:0000480!2.44e-11!626;UBERON:0000153!5.03e-11!129;UBERON:0007811!5.03e-11!129;UBERON:0000481!8.11e-10!347;UBERON:0000033!8.14e-10!123;UBERON:0000922!2.49e-09!612;UBERON:0002050!1.07e-08!605;UBERON:0005423!1.07e-08!605;UBERON:0003103!2.36e-08!69;UBERON:0000923!2.37e-08!604;UBERON:0005291!2.37e-08!604;UBERON:0006598!2.37e-08!604;UBERON:0002532!2.37e-08!604;UBERON:0004121!2.73e-08!169;UBERON:0007100!4.37e-08!27;UBERON:0000924!1.01e-07!173;UBERON:0006601!1.01e-07!173;UBERON:0003076!1.73e-07!15;UBERON:0003057!1.73e-07!15;UBERON:0002298!7.01e-07!8|ontology_enrichment_uberon_v019=UBERON:0004638;7.93e-24;18!UBERON:0001986;7.93e-24;18!UBERON:0004852;7.93e-24;18!UBERON:0007023;6.35e-19;114!UBERON:0000487;2.95e-18;22!UBERON:0006914;2.82e-15;25!UBERON:0003915;3.55e-13;9!UBERON:0004700;3.55e-13;9!UBERON:0001917;3.55e-13;9!UBERON:0002780;1.69e-12;41!UBERON:0001890;1.69e-12;41!UBERON:0000073;3.33e-12;53!UBERON:0002616;3.33e-12;53!UBERON:0001893;2.38e-11;34!UBERON:0003528;6.48e-11;34!UBERON:0002020;6.48e-11;34!UBERON:0002619;8.80e-11;22!UBERON:0002791;1.28e-10;32!UBERON:0001869;1.28e-10;32!UBERON:0001950;1.69e-09;20!UBERON:0000490;2.07e-09;33!UBERON:0000956;5.46e-09;25!UBERON:0000203;5.46e-09;25!UBERON:0001017;6.15e-08;75!UBERON:0001638;1.29e-07;9!UBERON:0003920;1.29e-07;9!UBERON:0004582;1.29e-07;9!UBERON:0000055;1.30e-07;65!UBERON:0002465;1.31e-07;10!UBERON:0000955;3.69e-07;68!UBERON:0001016;9.67e-07;83|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.76e-72,114;UBERON:0004111,8.14e-31,240;UBERON:0000025,3.44e-27,192;UBERON:0004638,7.90e-24,18;UBERON:0001986,7.90e-24,18;UBERON:0004852,7.90e-24,18;UBERON:0001049,1.05e-22,56;UBERON:0005068,1.05e-22,56;UBERON:0006241,1.05e-22,56;UBERON:0007135,1.05e-22,56;UBERON:0000073,1.48e-20,53;UBERON:0002616,1.48e-20,53;UBERON:0000487,2.94e-18,22;UBERON:0003075,8.38e-18,82;UBERON:0007284,8.38e-18,82;UBERON:0002780,2.41e-16,41;UBERON:0001890,2.41e-16,41;UBERON:0003080,2.41e-16,41;UBERON:0006240,2.41e-16,41;UBERON:0002346,2.47e-16,86;UBERON:0001017,4.65e-16,81;UBERON:0010314,8.91e-16,132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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79812 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19888 | |||
|TSSclassifier=S | |||
|UniProt=Q9H8L6 | |||
|association_with_transcript=36bp_to_ENST00000372027_5end | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_2_at_MMRN2_5end | |||
|id=chr10:88717312..88717335,- | |||
|ontology_enrichment_celltype=CL:0002139!2.61e-26!24;CL:0000115!2.98e-24!35;CL:0000071!2.22e-20!18;CL:0002546!2.22e-20!18;CL:0002078!7.58e-17!44;CL:1000413!2.21e-11!9;CL:0000213!1.54e-10!57;CL:0000215!1.54e-10!57;CL:0002544!4.03e-08!6;CL:0002543!5.26e-08!6;CL:0005020!1.78e-07!6;CL:0002138!1.78e-07!6;CL:0005022!1.78e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;7.34e-31;24!CL:0000115;7.94e-26;36!CL:0000071;7.93e-24;18!CL:0002078;3.72e-14;45!CL:1000413;3.55e-13;9!CL:0000213;1.04e-09;58!CL:0000215;1.04e-09;58!CL:0002544;2.59e-09;6!CL:0002543;3.52e-09;6!CL:0002138;1.43e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.47e-31,24;CL:0000115,2.63e-30,36;CL:0000071,7.90e-24,18;CL:0002546,7.90e-24,18;CL:0002078,6.50e-22,45;CL:0000213,1.46e-14,58;CL:0000215,1.46e-14,58;CL:1000413,3.55e-13,9;CL:0002544,2.54e-09,6;CL:0002543,3.47e-09,6;CL:0005020,1.46e-08,6;CL:0002138,1.46e-08,6;CL:0005022,1.46e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002546;7.93e-24;18!CL:0005022;1.43e-08;6!UBERON:0006601;6.68e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;7.93e-24;18!UBERON:0001986;7.93e-24;18!UBERON:0004852;7.93e-24;18!UBERON:0007023;6.35e-19;114!UBERON:0000487;2.95e-18;22!UBERON:0006914;2.82e-15;25!UBERON:0003915;3.55e-13;9!UBERON:0004700;3.55e-13;9!UBERON:0001917;3.55e-13;9!UBERON:0002780;1.69e-12;41!UBERON:0001890;1.69e-12;41!UBERON:0000073;3.33e-12;53!UBERON:0002616;3.33e-12;53!UBERON:0001893;2.38e-11;34!UBERON:0003528;6.48e-11;34!UBERON:0002020;6.48e-11;34!UBERON:0002619;8.80e-11;22!UBERON:0002791;1.28e-10;32!UBERON:0001869;1.28e-10;32!UBERON:0001950;1.69e-09;20!UBERON:0000490;2.07e-09;33!UBERON:0000956;5.46e-09;25!UBERON:0000203;5.46e-09;25!UBERON:0001017;6.15e-08;75!UBERON:0001638;1.29e-07;9!UBERON:0003920;1.29e-07;9!UBERON:0004582;1.29e-07;9!UBERON:0000055;1.30e-07;65!UBERON:0002465;1.31e-07;10!UBERON:0000955;3.69e-07;68!UBERON:0001016;9.67e-07;83 | |||
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| |||
|short_description=p2@MMRN2 | |||
}} |
Revision as of 14:47, 10 September 2013
Short description: | p2@MMRN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MMRN2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 36bp_to_ENST00000372027_5end |
EntrezGene: | MMRN2 |
HGNC: | 19888 |
UniProt: | Q9H8L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.47e-31 | 24 |
endothelial cell | 2.63e-30 | 36 |
blood vessel endothelial cell | 7.90e-24 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.90e-24 | 18 |
meso-epithelial cell | 6.50e-22 | 45 |
lining cell | 1.46e-14 | 58 |
barrier cell | 1.46e-14 | 58 |
endothelial cell of artery | 3.55e-13 | 9 |
aortic endothelial cell | 2.54e-09 | 6 |
vein endothelial cell | 3.47e-09 | 6 |
lymphangioblast | 1.46e-08 | 6 |
endothelial cell of lymphatic vessel | 1.46e-08 | 6 |
vascular lymphangioblast | 1.46e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.