FFCP PHASE1:Hg19::chr10:105452941..105452991,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9644|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23664|TSSclassifier=S|UniProt=|association_with_transcript=-7bp_to_uc010qqr.1,uc010qqt.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_9_at_SH3PXD2A_5end|id=chr10:105452941..105452991,-|ontology_enrichment_celltype=CL:0002334!3.72e-07!12|ontology_enrichment_celltype_v019=CL:0000945;3.25e-10;24!CL:0002334;1.14e-07;12|ontology_enrichment_celltype_v019_2=CL:0000945,3.24e-10,24;CL:0000826,3.24e-10,24;CL:0002334,8.82e-08,12|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!3.98e-08!14|ontology_enrichment_disease_v019=DOID:2394;5.02e-12;14|ontology_enrichment_disease_v019_2=DOID:2394,5.75e-12,14|ontology_enrichment_uberon=UBERON:0001049!2.12e-20!57;UBERON:0005068!2.12e-20!57;UBERON:0006241!2.12e-20!57;UBERON:0007135!2.12e-20!57;UBERON:0007023!2.21e-19!115;UBERON:0002780!1.58e-17!41;UBERON:0001890!1.58e-17!41;UBERON:0006240!1.58e-17!41;UBERON:0003080!1.26e-16!42;UBERON:0002616!1.43e-16!59;UBERON:0001893!7.17e-16!34;UBERON:0002020!1.39e-15!34;UBERON:0003528!1.39e-15!34;UBERON:0002791!3.40e-15!33;UBERON:0003075!6.23e-15!86;UBERON:0007284!6.23e-15!86;UBERON:0001869!1.28e-14!32;UBERON:0000955!1.75e-14!69;UBERON:0006238!1.75e-14!69;UBERON:0005743!4.70e-14!86;UBERON:0002346!5.10e-13!90;UBERON:0000073!5.54e-13!94;UBERON:0001016!5.54e-13!94;UBERON:0001017!7.03e-13!82;UBERON:0003056!4.31e-12!61;UBERON:0002619!6.48e-12!22;UBERON:0001950!7.69e-11!20;UBERON:0000956!1.74e-10!25;UBERON:0000203!1.74e-10!25;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0000033!4.19e-07!123;UBERON:0002420!6.64e-07!9;UBERON:0007245!6.64e-07!9;UBERON:0010009!6.64e-07!9;UBERON:0010011!6.64e-07!9;UBERON:0000454!6.64e-07!9;UBERON:0000025!7.36e-07!194;UBERON:0002308!8.57e-07!9;UBERON:0000125!8.57e-07!9|ontology_enrichment_uberon_v019=UBERON:0001893;4.28e-18;34!UBERON:0003528;3.42e-17;34!UBERON:0002020;3.42e-17;34!UBERON:0001869;8.42e-17;32!UBERON:0002791;1.12e-16;32!UBERON:0002780;2.70e-16;41!UBERON:0001890;2.70e-16;41!UBERON:0000073;1.03e-15;53!UBERON:0002616;1.03e-15;53!UBERON:0002619;1.47e-15;22!UBERON:0001950;5.59e-14;20!UBERON:0000956;6.69e-13;25!UBERON:0000203;6.69e-13;25!UBERON:0000955;4.48e-10;68!UBERON:0001017;6.31e-10;75!UBERON:0002420;1.05e-09;9!UBERON:0007245;1.05e-09;9!UBERON:0010009;1.05e-09;9!UBERON:0010011;1.05e-09;9!UBERON:0000454;1.05e-09;9!UBERON:0000125;1.56e-09;9!UBERON:0002308;1.56e-09;9!UBERON:0001016;1.59e-08;83!UBERON:0009663;7.05e-08;7!UBERON:0000991;2.73e-07;21!UBERON:0000200;4.95e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.34e-29,56;UBERON:0005068,1.34e-29,56;UBERON:0006241,1.34e-29,56;UBERON:0007135,1.34e-29,56;UBERON:0000073,5.09e-27,53;UBERON:0002616,5.09e-27,53;UBERON:0002780,1.24e-22,41;UBERON:0001890,1.24e-22,41;UBERON:0003080,1.24e-22,41;UBERON:0006240,1.24e-22,41;UBERON:0003075,9.57e-22,82;UBERON:0007284,9.57e-22,82;UBERON:0001893,9.81e-21,34;UBERON:0000955,1.35e-20,68;UBERON:0006238,1.35e-20,68;UBERON:0003528,2.52e-20,34;UBERON:0002020,2.52e-20,34;UBERON:0002346,7.18e-20,86;UBERON:0001017,8.81e-20,81;UBERON:0001869,6.90e-19,32;UBERON:0002791,1.06e-18,32;UBERON:0001016,3.16e-18,89;UBERON:0007023,2.04e-17,114;UBERON:0003056,4.31e-17,61;UBERON:0002619,1.75e-15,22;UBERON:0010371,6.33e-15,104;UBERON:0001950,6.95e-14,20;UBERON:0010314,7.22e-13,132;UBERON:0000956,7.74e-13,25;UBERON:0000203,7.74e-13,25;UBERON:0000025,1.13e-12,192;UBERON:0002420,1.24e-09,9;UBERON:0007245,1.24e-09,9;UBERON:0010009,1.24e-09,9;UBERON:0010011,1.24e-09,9;UBERON:0000454,1.24e-09,9;UBERON:0000125,1.82e-09,9;UBERON:0002308,1.82e-09,9;UBERON:0003076,4.15e-08,15;UBERON:0003057,4.15e-08,15;UBERON:0004111,7.44e-08,240;UBERON:0009663,8.11e-08,7;UBERON:0000991,2.43e-07,21;UBERON:0009196,2.43e-07,21;UBERON:0009117,2.43e-07,21;UBERON:0005564,2.43e-07,21;UBERON:0000200,5.13e-07,6;UBERON:0004121,7.04e-07,171;UBERON:0000924,7.04e-07,171;UBERON:0006601,7.04e-07,171;UBERON:0004176,8.19e-07,22|phase1_expression=2.72517568905835,0.856402095563933,3.94672331468719,4.00293193412522,3.12872766099101,4.36169262050184,2.53299878168311,0,0,1.22866968250754,0,2.18441372130172,7.3854753903967,0.123766352960047,0.331397375727916,0,1.20538905604795,1.46062018077475,1.46379839637152,0,0,0,0.286235987131057,0.273748850145768,0,9.47526231274596,8.45636071334441,8.26463203793632,0.393364276848904,0,0.154816123316076,3.67768489791571,5.4217065380085,2.58827807116751,0,3.12772311472327,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,2.73069305631066,3.55803701545422,2.13365111283254,2.00197993518006,1.72425731986345,1.32208974556972,1.90810750907073,1.70763890732835,7.6340834618222,2.29363936875137,0,0,0,0.393419540227666,0.393010762749165,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.334231370655521,0,0,0.270803863765016,0.512365278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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-7bp_to_uc010qqr.1,uc010qqt.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_9_at_SH3PXD2A_5end | |||
|id=chr10:105452941..105452991,- | |||
|ontology_enrichment_celltype=CL:0002334!3.72e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000945;3.25e-10;24!CL:0002334;1.14e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.24e-10,24;CL:0000826,3.24e-10,24;CL:0002334,8.82e-08,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.98e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.02e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,5.75e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.12e-20!57;UBERON:0005068!2.12e-20!57;UBERON:0006241!2.12e-20!57;UBERON:0007135!2.12e-20!57;UBERON:0007023!2.21e-19!115;UBERON:0002780!1.58e-17!41;UBERON:0001890!1.58e-17!41;UBERON:0006240!1.58e-17!41;UBERON:0003080!1.26e-16!42;UBERON:0002616!1.43e-16!59;UBERON:0001893!7.17e-16!34;UBERON:0002020!1.39e-15!34;UBERON:0003528!1.39e-15!34;UBERON:0002791!3.40e-15!33;UBERON:0003075!6.23e-15!86;UBERON:0007284!6.23e-15!86;UBERON:0001869!1.28e-14!32;UBERON:0000955!1.75e-14!69;UBERON:0006238!1.75e-14!69;UBERON:0005743!4.70e-14!86;UBERON:0002346!5.10e-13!90;UBERON:0000073!5.54e-13!94;UBERON:0001016!5.54e-13!94;UBERON:0001017!7.03e-13!82;UBERON:0003056!4.31e-12!61;UBERON:0002619!6.48e-12!22;UBERON:0001950!7.69e-11!20;UBERON:0000956!1.74e-10!25;UBERON:0000203!1.74e-10!25;UBERON:0000153!1.36e-07!129;UBERON:0007811!1.36e-07!129;UBERON:0000033!4.19e-07!123;UBERON:0002420!6.64e-07!9;UBERON:0007245!6.64e-07!9;UBERON:0010009!6.64e-07!9;UBERON:0010011!6.64e-07!9;UBERON:0000454!6.64e-07!9;UBERON:0000025!7.36e-07!194;UBERON:0002308!8.57e-07!9;UBERON:0000125!8.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;4.28e-18;34!UBERON:0003528;3.42e-17;34!UBERON:0002020;3.42e-17;34!UBERON:0001869;8.42e-17;32!UBERON:0002791;1.12e-16;32!UBERON:0002780;2.70e-16;41!UBERON:0001890;2.70e-16;41!UBERON:0000073;1.03e-15;53!UBERON:0002616;1.03e-15;53!UBERON:0002619;1.47e-15;22!UBERON:0001950;5.59e-14;20!UBERON:0000956;6.69e-13;25!UBERON:0000203;6.69e-13;25!UBERON:0000955;4.48e-10;68!UBERON:0001017;6.31e-10;75!UBERON:0002420;1.05e-09;9!UBERON:0007245;1.05e-09;9!UBERON:0010009;1.05e-09;9!UBERON:0010011;1.05e-09;9!UBERON:0000454;1.05e-09;9!UBERON:0000125;1.56e-09;9!UBERON:0002308;1.56e-09;9!UBERON:0001016;1.59e-08;83!UBERON:0009663;7.05e-08;7!UBERON:0000991;2.73e-07;21!UBERON:0000200;4.95e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.34e-29,56;UBERON:0005068,1.34e-29,56;UBERON:0006241,1.34e-29,56;UBERON:0007135,1.34e-29,56;UBERON:0000073,5.09e-27,53;UBERON:0002616,5.09e-27,53;UBERON:0002780,1.24e-22,41;UBERON:0001890,1.24e-22,41;UBERON:0003080,1.24e-22,41;UBERON:0006240,1.24e-22,41;UBERON:0003075,9.57e-22,82;UBERON:0007284,9.57e-22,82;UBERON:0001893,9.81e-21,34;UBERON:0000955,1.35e-20,68;UBERON:0006238,1.35e-20,68;UBERON:0003528,2.52e-20,34;UBERON:0002020,2.52e-20,34;UBERON:0002346,7.18e-20,86;UBERON:0001017,8.81e-20,81;UBERON:0001869,6.90e-19,32;UBERON:0002791,1.06e-18,32;UBERON:0001016,3.16e-18,89;UBERON:0007023,2.04e-17,114;UBERON:0003056,4.31e-17,61;UBERON:0002619,1.75e-15,22;UBERON:0010371,6.33e-15,104;UBERON:0001950,6.95e-14,20;UBERON:0010314,7.22e-13,132;UBERON:0000956,7.74e-13,25;UBERON:0000203,7.74e-13,25;UBERON:0000025,1.13e-12,192;UBERON:0002420,1.24e-09,9;UBERON:0007245,1.24e-09,9;UBERON:0010009,1.24e-09,9;UBERON:0010011,1.24e-09,9;UBERON:0000454,1.24e-09,9;UBERON:0000125,1.82e-09,9;UBERON:0002308,1.82e-09,9;UBERON:0003076,4.15e-08,15;UBERON:0003057,4.15e-08,15;UBERON:0004111,7.44e-08,240;UBERON:0009663,8.11e-08,7;UBERON:0000991,2.43e-07,21;UBERON:0009196,2.43e-07,21;UBERON:0009117,2.43e-07,21;UBERON:0005564,2.43e-07,21;UBERON:0000200,5.13e-07,6;UBERON:0004121,7.04e-07,171;UBERON:0000924,7.04e-07,171;UBERON:0006601,7.04e-07,171;UBERON:0004176,8.19e-07,22 | |||
|phase1_expression=2.72517568905835,0.856402095563933,3.94672331468719,4.00293193412522,3.12872766099101,4.36169262050184,2.53299878168311,0,0,1.22866968250754,0,2.18441372130172,7.3854753903967,0.123766352960047,0.331397375727916,0,1.20538905604795,1.46062018077475,1.46379839637152,0,0,0,0.286235987131057,0.273748850145768,0,9.47526231274596,8.45636071334441,8.26463203793632,0.393364276848904,0,0.154816123316076,3.67768489791571,5.4217065380085,2.58827807116751,0,3.12772311472327,0,0,0.200544447470142,0.217010870715852,0.223915474239924,0,0,0,0,0.242584061187816,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0.16072558669708,0,0,0,0,2.73069305631066,3.55803701545422,2.13365111283254,2.00197993518006,1.72425731986345,1.32208974556972,1.90810750907073,1.70763890732835,7.6340834618222,2.29363936875137,0,0,0,0.393419540227666,0.393010762749165,0.616804496998528,0.501559486172034,0.32592226663359,0,0,0.334231370655521,0,0,0.270803863765016,0.512365278902701,0,0.164437904603676,0.829050053357545,0,0,0,0,0.906474741580529,0.383220493601921,0,0,0.318565414324097,0,0,0,0.127986611154418,1.24930726552346,0,0,0,0.267440195783507,0.144824403882799,0,0,0.639312809217652,0,0,0,3.9764297352555,2.91980922181582,0.189069634328136,0,0.263504357079378,2.75056058545197,0,0,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05265836499774,2.98183171017191,2.27934920996244,1.58891016975863,2.29469296599051,4.25602058638028,0.560677600142307,7.47242970107935,5.92002116201184,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0.149448680551801,0,0,0.140450806702248,0,0.122834317311768,0,0,0,0.910161361938026,0.718618141816238,0,0.125118519871964,0.277064115484183,0,0,0.600952235626387,0.680593098960126,0.358779271377724,0.427114777637135,0.847727604638247,0,0.206105058476878,0,0.558350568994769,1.0126579934476,1.36411807225678,1.00973509697646,0,0.323292113637624,0.355009592516614,0.503760491138201,0.339121184620975,0.57978255948989,0.545492241181669,0,0.365921118388786,0,0.232387885739037,0.207322110030741,0.252320850875628,0.36497735907583,0,0,0,0,0,0.473227200159376,1.18009283054671,0.723033089650446,0.220587945464788,0.871517776369625,0.949082476444386,0.808987848960987,0.784885860501384,0.769494313892781,0,1.40241773803446,0.4115740113314,4.41026134156626,0,0,0,0,0,0.686271241194102,0.98775256867763,0,0.100528972411631,0.462942225792648,0,0,0,0,2.58299127318808,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,1.13420077793909,0,0.290633938513962,7.28427090413901,0,0.704387472105808,0,0,0.12624243342638,0,0,0,0,1.33675740514321,0.300343057843917,0.857479297891735,0,0.87192013766656,0.1466765716419,12.79789986002,0,0,3.98907174877306,4.16029747645464,0,0,0,0.57191197463259,0,0,0,0.355391948742546,0,3.61727252471503,4.35766729300147,8.99756920638513,0,0,0,0,0,0,0.579125226670317,0,0,2.12961773587702,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0,0.157702415033935,0.819989904948992,0.601892199455438,0,1.03473071292505,0,0,0.347534457872331,0.979005787313703,0,0.413536052245775,0.431428401637234,0.320182673410333,0,0,0.907170879989041,16.3751153160393,14.1185015425017,10.1037633995906,11.4043842837574,6.65219423786715,16.8896617200788,2.96836132889982,1.85051632563187,5.50441348470694,0.821271560138091,3.11552657510173,0.697262270759755,0,2.80709058424599,0.0920809889358963,0.459257792658427,0.364182336013434,0.393373244878272,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0.261435451024901,0.512900250232778,5.576248976895,2.92840555197873,0.412164046590889,0,0,0,0,6.42735719376638,0.48335359146061,0.154048617114644,0.307007349452259,0.137836572484531,0.214840489736547,0.145016693914229,0.767039646744908,2.49289699810865,3.47098322258054,5.57351195358808,7.2739246121913,0.809262246844399,8.36721988735114,10.3888074454111,2.7881490806424,0,1.06461206063404,6.08953094452551,1.11194531462352,0.572499546967965,0,0.949138274156178,0.38126038784765,0.767693373934002,0,0,6.27958912159384,0.179872457583315,0.54907405947211,0.589062011728432,0.606547444719948,0,3.79132610615083,0,0,3.16950440270266,0.136499911407986,0.282810863907425,0,6.06501877900737,0,0,1.15755106853338,0.655894752046633,2.63783490051515,1.8589409885985,6.47899885824155,0.286822704408103,0.196498082026242,2.1400263088875,1.06428319221179,0,0,0,0,3.1753297199419,4.69211592875051,0,0.0941438007767792,1.72202149068492,0,1.7737206141467,0.229723400206959,0,0,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0.106824071127473,0,0,2.04383492638291,0,0,1.59426272728822,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0.146508179271894,0,3.34330152832435,0,0.71623345421307,0,0,8.94732882989668,8.01815673539923,0,0.329607748453519,0.211125408127993,1.19548792950642,1.93398740871803,0,0,4.80030741298171,1.55519793830904,0.089868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| |||
|short_description=p9@SH3PXD2A | |||
}} |
Revision as of 11:32, 10 September 2013
Short description: | p9@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_SH3PXD2A_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -7bp_to_uc010qqr.1, uc010qqt.1_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.24e-10 | 24 |
pro-B cell | 3.24e-10 | 24 |
preadipocyte | 8.82e-08 | 12 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 5.75e-12 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.