FFCP PHASE1:Hg19::chr21:27011585..27011618,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=58494|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14686|TSSclassifier=S|UniProt=A8MQ45,P57087,A8MTB0,A8MXS1|association_with_transcript=0bp_to_ENST00000312957,NM_021219,uc002ylp.1,uc002ylq.1,uc002ylr.1,uc010glh.1,uc010gli.1,uc011ace.1,uc011acf.1_5end|description=CAGE_peak_5_at_JAM2_5end|id=chr21:27011585..27011618,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;4.02e-13;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.40e-48!115;UBERON:0001049!1.70e-36!57;UBERON:0005068!1.70e-36!57;UBERON:0006241!1.70e-36!57;UBERON:0007135!1.70e-36!57;UBERON:0001017!2.09e-35!82;UBERON:0003075!8.16e-35!86;UBERON:0007284!8.16e-35!86;UBERON:0005743!1.57e-34!86;UBERON:0000073!9.20e-34!94;UBERON:0001016!9.20e-34!94;UBERON:0002346!1.21e-32!90;UBERON:0002616!5.05e-31!59;UBERON:0000955!1.42e-30!69;UBERON:0006238!1.42e-30!69;UBERON:0003080!1.01e-29!42;UBERON:0002780!4.91e-29!41;UBERON:0001890!4.91e-29!41;UBERON:0006240!4.91e-29!41;UBERON:0003056!4.12e-26!61;UBERON:0004121!2.90e-25!169;UBERON:0001893!5.14e-25!34;UBERON:0002020!8.36e-25!34;UBERON:0003528!8.36e-25!34;UBERON:0000153!1.66e-24!129;UBERON:0007811!1.66e-24!129;UBERON:0002791!2.45e-24!33;UBERON:0000924!2.76e-24!173;UBERON:0006601!2.76e-24!173;UBERON:0000033!7.23e-24!123;UBERON:0001869!9.85e-24!32;UBERON:0000956!4.50e-19!25;UBERON:0000203!4.50e-19!25;UBERON:0002619!2.24e-18!22;UBERON:0001950!7.92e-17!20;UBERON:0000475!3.13e-13!365;UBERON:0000468!1.42e-10!659;UBERON:0000064!3.32e-09!219;UBERON:0000062!9.87e-09!511;UBERON:0000481!1.23e-08!347;UBERON:0000477!1.73e-08!286;UBERON:0003076!4.99e-08!15;UBERON:0003057!4.99e-08!15;UBERON:0000480!5.64e-08!626;UBERON:0000467!7.28e-08!625;UBERON:0000025!8.86e-08!194;UBERON:0002420!1.78e-07!9;UBERON:0007245!1.78e-07!9;UBERON:0010009!1.78e-07!9;UBERON:0010011!1.78e-07!9;UBERON:0000454!1.78e-07!9;UBERON:0001871!1.94e-07!7;UBERON:0004111!1.99e-07!241;UBERON:0002308!3.60e-07!9;UBERON:0000125!3.60e-07!9;UBERON:0000922!8.15e-07!612|ontology_enrichment_uberon_v019=UBERON:0001893;3.40e-30;34!UBERON:0001869;4.56e-30;32!UBERON:0002791;6.43e-30;32!UBERON:0003528;8.51e-30;34!UBERON:0002020;8.51e-30;34!UBERON:0002780;3.15e-28;41!UBERON:0001890;3.15e-28;41!UBERON:0002619;5.24e-27;22!UBERON:0000956;1.73e-26;25!UBERON:0000203;1.73e-26;25!UBERON:0000073;6.10e-26;53!UBERON:0002616;6.10e-26;53!UBERON:0001950;1.22e-24;20!UBERON:0007023;2.54e-17;114!UBERON:0000955;1.26e-16;68!UBERON:0001017;2.08e-16;75!UBERON:0001016;5.01e-14;83!UBERON:0002420;1.95e-10;9!UBERON:0007245;1.95e-10;9!UBERON:0010009;1.95e-10;9!UBERON:0010011;1.95e-10;9!UBERON:0000454;1.95e-10;9!UBERON:0000125;7.12e-10;9!UBERON:0002308;7.12e-10;9!UBERON:0001871;3.53e-09;6!UBERON:0009663;2.86e-08;7!UBERON:0000200;2.86e-08;6!UBERON:0011216;9.38e-08;132!UBERON:0002298;1.79e-07;6!UBERON:0001872;2.25e-07;5!UBERON:0000349;2.92e-07;5!UBERON:0004732;3.14e-07;13!UBERON:0010314;4.67e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.87e-66,114;UBERON:0001049,3.84e-48,56;UBERON:0005068,3.84e-48,56;UBERON:0006241,3.84e-48,56;UBERON:0007135,3.84e-48,56;UBERON:0000073,1.13e-44,53;UBERON:0002616,1.13e-44,53;UBERON:0002780,8.01e-40,41;UBERON:0001890,8.01e-40,41;UBERON:0003080,8.01e-40,41;UBERON:0006240,8.01e-40,41;UBERON:0001017,2.53e-38,81;UBERON:0003075,3.22e-38,82;UBERON:0007284,3.22e-38,82;UBERON:0000955,8.83e-38,68;UBERON:0006238,8.83e-38,68;UBERON:0001016,3.34e-36,89;UBERON:0002346,1.87e-35,86;UBERON:0001893,2.05e-35,34;UBERON:0003528,4.22e-35,34;UBERON:0002020,4.22e-35,34;UBERON:0001869,1.82e-33,32;UBERON:0002791,2.52e-33,32;UBERON:0010371,1.46e-32,104;UBERON:0010314,1.04e-31,132;UBERON:0002619,5.18e-27,22;UBERON:0000956,2.11e-26,25;UBERON:0000203,2.11e-26,25;UBERON:0003056,3.60e-26,61;UBERON:0001950,1.15e-24,20;UBERON:0004121,3.34e-24,171;UBERON:0000924,3.34e-24,171;UBERON:0006601,3.34e-24,171;UBERON:0011216,1.34e-20,223;UBERON:0004111,1.29e-12,240;UBERON:0000025,2.79e-12,192;UBERON:0002420,1.63e-10,9;UBERON:0007245,1.63e-10,9;UBERON:0010009,1.63e-10,9;UBERON:0010011,1.63e-10,9;UBERON:0000454,1.63e-10,9;UBERON:0000125,4.73e-10,9;UBERON:0002308,4.73e-10,9;UBERON:0003076,1.20e-09,15;UBERON:0003057,1.20e-09,15;UBERON:0001871,3.40e-09,6;UBERON:0009663,2.38e-08,7;UBERON:0000200,2.87e-08,6;UBERON:0000483,5.48e-08,306;UBERON:0000119,1.06e-07,309;UBERON:0000922,1.28e-07,592;UBERON:0002298,1.57e-07,6;UBERON:0004732,2.05e-07,13;UBERON:0001872,2.08e-07,5;UBERON:0002050,2.20e-07,564;UBERON:0000923,2.74e-07,560;UBERON:0010316,2.74e-07,560;UBERON:0005291,2.74e-07,560;UBERON:0006598,2.74e-07,560;UBERON:0010317,2.74e-07,560;UBERON:0002532,2.74e-07,560;UBERON:0000349,2.82e-07,5;UBERON:0005423,3.10e-07,581|phase1_expression=1.63510541343501,2.35510576280081,4.08767771878316,1.0007329835313,0.893922188854576,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=58494 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14686 | |||
|TSSclassifier=S | |||
|UniProt=A8MQ45,P57087,A8MTB0,A8MXS1 | |||
|association_with_transcript=0bp_to_ENST00000312957,NM_021219,uc002ylp.1,uc002ylq.1,uc002ylr.1,uc010glh.1,uc010gli.1,uc011ace.1,uc011acf.1_5end | |||
|description=CAGE_peak_5_at_JAM2_5end | |||
|id=chr21:27011585..27011618,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.02e-13;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.40e-48!115;UBERON:0001049!1.70e-36!57;UBERON:0005068!1.70e-36!57;UBERON:0006241!1.70e-36!57;UBERON:0007135!1.70e-36!57;UBERON:0001017!2.09e-35!82;UBERON:0003075!8.16e-35!86;UBERON:0007284!8.16e-35!86;UBERON:0005743!1.57e-34!86;UBERON:0000073!9.20e-34!94;UBERON:0001016!9.20e-34!94;UBERON:0002346!1.21e-32!90;UBERON:0002616!5.05e-31!59;UBERON:0000955!1.42e-30!69;UBERON:0006238!1.42e-30!69;UBERON:0003080!1.01e-29!42;UBERON:0002780!4.91e-29!41;UBERON:0001890!4.91e-29!41;UBERON:0006240!4.91e-29!41;UBERON:0003056!4.12e-26!61;UBERON:0004121!2.90e-25!169;UBERON:0001893!5.14e-25!34;UBERON:0002020!8.36e-25!34;UBERON:0003528!8.36e-25!34;UBERON:0000153!1.66e-24!129;UBERON:0007811!1.66e-24!129;UBERON:0002791!2.45e-24!33;UBERON:0000924!2.76e-24!173;UBERON:0006601!2.76e-24!173;UBERON:0000033!7.23e-24!123;UBERON:0001869!9.85e-24!32;UBERON:0000956!4.50e-19!25;UBERON:0000203!4.50e-19!25;UBERON:0002619!2.24e-18!22;UBERON:0001950!7.92e-17!20;UBERON:0000475!3.13e-13!365;UBERON:0000468!1.42e-10!659;UBERON:0000064!3.32e-09!219;UBERON:0000062!9.87e-09!511;UBERON:0000481!1.23e-08!347;UBERON:0000477!1.73e-08!286;UBERON:0003076!4.99e-08!15;UBERON:0003057!4.99e-08!15;UBERON:0000480!5.64e-08!626;UBERON:0000467!7.28e-08!625;UBERON:0000025!8.86e-08!194;UBERON:0002420!1.78e-07!9;UBERON:0007245!1.78e-07!9;UBERON:0010009!1.78e-07!9;UBERON:0010011!1.78e-07!9;UBERON:0000454!1.78e-07!9;UBERON:0001871!1.94e-07!7;UBERON:0004111!1.99e-07!241;UBERON:0002308!3.60e-07!9;UBERON:0000125!3.60e-07!9;UBERON:0000922!8.15e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.40e-30;34!UBERON:0001869;4.56e-30;32!UBERON:0002791;6.43e-30;32!UBERON:0003528;8.51e-30;34!UBERON:0002020;8.51e-30;34!UBERON:0002780;3.15e-28;41!UBERON:0001890;3.15e-28;41!UBERON:0002619;5.24e-27;22!UBERON:0000956;1.73e-26;25!UBERON:0000203;1.73e-26;25!UBERON:0000073;6.10e-26;53!UBERON:0002616;6.10e-26;53!UBERON:0001950;1.22e-24;20!UBERON:0007023;2.54e-17;114!UBERON:0000955;1.26e-16;68!UBERON:0001017;2.08e-16;75!UBERON:0001016;5.01e-14;83!UBERON:0002420;1.95e-10;9!UBERON:0007245;1.95e-10;9!UBERON:0010009;1.95e-10;9!UBERON:0010011;1.95e-10;9!UBERON:0000454;1.95e-10;9!UBERON:0000125;7.12e-10;9!UBERON:0002308;7.12e-10;9!UBERON:0001871;3.53e-09;6!UBERON:0009663;2.86e-08;7!UBERON:0000200;2.86e-08;6!UBERON:0011216;9.38e-08;132!UBERON:0002298;1.79e-07;6!UBERON:0001872;2.25e-07;5!UBERON:0000349;2.92e-07;5!UBERON:0004732;3.14e-07;13!UBERON:0010314;4.67e-07;132 | |||
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| |||
|short_description=p5@JAM2 | |||
}} |
Revision as of 09:56, 12 September 2013
Short description: | p5@JAM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_JAM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000312957, NM_021219, uc002ylp.1, uc002ylq.1, uc002ylr.1, uc010glh.1, uc010gli.1, uc011ace.1, uc011acf.1_5end |
EntrezGene: | JAM2 |
HGNC: | 14686 |
UniProt: | A8MQ45P57087A8MTB0A8MXS1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.