FFCP PHASE1:Hg19::chr3:63428784..63428795,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=132204|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16507|TSSclassifier=S|UniProt=F8WDF9|association_with_transcript=0bp_to_ENST00000498449_5end|coexpression_cluster_id=C3|description=CAGE_peak_8_at_SYNPR_5end|id=chr3:63428784..63428795,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;2.88e-18;2!UBERON:0006601;1.48e-12;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001893!1.29e-101!34;UBERON:0001869!2.00e-100!32;UBERON:0002791!6.60e-97!33;UBERON:0002020!4.84e-94!34;UBERON:0003528!4.84e-94!34;UBERON:0002780!4.22e-90!41;UBERON:0001890!4.22e-90!41;UBERON:0006240!4.22e-90!41;UBERON:0001049!6.27e-89!57;UBERON:0005068!6.27e-89!57;UBERON:0006241!6.27e-89!57;UBERON:0007135!6.27e-89!57;UBERON:0003080!7.25e-88!42;UBERON:0002619!3.36e-85!22;UBERON:0001950!9.57e-85!20;UBERON:0002616!2.05e-75!59;UBERON:0000956!7.64e-75!25;UBERON:0000203!7.64e-75!25;UBERON:0000955!9.94e-72!69;UBERON:0006238!9.94e-72!69;UBERON:0001017!1.26e-71!82;UBERON:0005743!4.66e-68!86;UBERON:0002346!1.65e-61!90;UBERON:0000073!4.16e-61!94;UBERON:0001016!4.16e-61!94;UBERON:0003075!7.37e-61!86;UBERON:0007284!7.37e-61!86;UBERON:0003056!4.41e-59!61;UBERON:0007023!1.88e-41!115;UBERON:0000033!1.59e-40!123;UBERON:0000153!2.35e-38!129;UBERON:0007811!2.35e-38!129;UBERON:0000924!1.57e-32!173;UBERON:0006601!1.57e-32!173;UBERON:0004121!1.99e-31!169;UBERON:0000200!2.10e-30!6;UBERON:0002021!3.47e-26!5;UBERON:0001872!6.11e-26!5;UBERON:0001871!1.53e-22!7;UBERON:0000369!8.01e-22!4;UBERON:0002435!8.01e-22!4;UBERON:0000204!8.01e-22!4;UBERON:0010082!8.01e-22!4;UBERON:0000025!1.02e-21!194;UBERON:0002420!2.19e-20!9;UBERON:0007245!2.19e-20!9;UBERON:0010009!2.19e-20!9;UBERON:0010011!2.19e-20!9;UBERON:0000454!2.19e-20!9;UBERON:0002308!2.78e-20!9;UBERON:0000125!2.78e-20!9;UBERON:0009663!9.26e-19!7;UBERON:0005383!9.83e-17!3;UBERON:0005382!9.83e-17!3;UBERON:0002771!2.50e-16!3;UBERON:0004111!3.60e-16!241;UBERON:0000477!1.16e-13!286;UBERON:0000064!2.26e-13!219;UBERON:0000483!4.20e-12!309;UBERON:0000119!6.40e-12!312;UBERON:0001873!1.18e-11!2;UBERON:0010122!1.18e-11!2;UBERON:0001870!3.00e-11!2;UBERON:0000475!6.13e-11!365;UBERON:0000349!1.12e-09!5;UBERON:0003076!8.71e-08!15;UBERON:0003057!8.71e-08!15;UBERON:0002240!2.42e-07!3;UBERON:0000988!2.95e-07!3;UBERON:0000062!5.27e-07!511;UBERON:0002022!7.90e-07!1;UBERON:0000481!7.99e-07!347;UBERON:0001882!8.34e-07!1;UBERON:0005403!8.34e-07!1;UBERON:0001874!8.81e-07!1|ontology_enrichment_uberon_v019=UBERON:0001950;1.64e-102;20!UBERON:0001869;2.67e-101;32!UBERON:0001893;4.40e-96;34!UBERON:0002619;2.18e-93;22!UBERON:0002791;6.05e-93;32!UBERON:0003528;1.11e-82;34!UBERON:0002020;1.11e-82;34!UBERON:0000956;2.47e-82;25!UBERON:0000203;2.47e-82;25!UBERON:0002780;2.25e-59;41!UBERON:0001890;2.25e-59;41!UBERON:0002021;2.01e-43;5!UBERON:0001872;6.29e-43;5!UBERON:0000369;1.65e-35;4!UBERON:0002435;1.65e-35;4!UBERON:0000204;1.65e-35;4!UBERON:0000073;1.09e-34;53!UBERON:0002616;1.09e-34;53!UBERON:0005383;6.86e-27;3!UBERON:0005382;6.86e-27;3!UBERON:0000955;3.10e-25;68!UBERON:0001017;3.01e-24;75!UBERON:0000200;2.94e-23;6!UBERON:0009663;1.97e-20;7!UBERON:0001873;2.88e-18;2!UBERON:0001016;5.95e-18;83!UBERON:0002420;5.99e-16;9!UBERON:0000125;5.99e-16;9!UBERON:0007245;5.99e-16;9!UBERON:0002308;5.99e-16;9!UBERON:0010009;5.99e-16;9!UBERON:0010011;5.99e-16;9!UBERON:0000454;5.99e-16;9!UBERON:0001870;1.68e-12;3!UBERON:0001871;1.05e-11;6!UBERON:0002022;1.80e-10;1!UBERON:0001882;2.06e-10;1!UBERON:0001874;2.06e-10;1!UBERON:0005403;2.06e-10;1!UBERON:0007023;3.50e-10;114!UBERON:0002581;5.29e-10;1!UBERON:0002902;5.29e-10;1!UBERON:0003112;5.29e-10;1!UBERON:0011158;5.29e-10;1!UBERON:0009899;5.29e-10;1!UBERON:0007190;5.29e-10;1!UBERON:0003128;5.29e-10;1!UBERON:0001703;5.29e-10;1!UBERON:0002241;5.29e-10;1!UBERON:0011216;1.24e-08;132!UBERON:0010314;1.41e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.52e-112,32;UBERON:0001893,5.94e-106,34;UBERON:0001950,2.07e-102,20;UBERON:0002791,5.42e-102,32;UBERON:0003528,5.28e-96,34;UBERON:0002020,5.28e-96,34;UBERON:0002619,2.69e-93,22;UBERON:0002780,8.12e-88,41;UBERON:0001890,8.12e-88,41;UBERON:0003080,8.12e-88,41;UBERON:0006240,8.12e-88,41;UBERON:0000956,2.98e-82,25;UBERON:0000203,2.98e-82,25;UBERON:0000073,1.18e-67,53;UBERON:0002616,1.18e-67,53;UBERON:0001049,6.14e-64,56;UBERON:0005068,6.14e-64,56;UBERON:0006241,6.14e-64,56;UBERON:0007135,6.14e-64,56;UBERON:0003056,1.53e-58,61;UBERON:0000955,9.40e-57,68;UBERON:0006238,9.40e-57,68;UBERON:0001017,2.18e-47,81;UBERON:0002021,2.89e-43,5;UBERON:0003075,5.74e-43,82;UBERON:0007284,5.74e-43,82;UBERON:0001872,7.58e-43,5;UBERON:0001016,1.88e-42,89;UBERON:0002346,7.50e-41,86;UBERON:0000369,7.52e-36,4;UBERON:0002435,7.52e-36,4;UBERON:0000204,7.52e-36,4;UBERON:0010082,7.52e-36,4;UBERON:0010371,2.56e-33,104;UBERON:0010314,2.17e-28,13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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=132204 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16507 | |||
|TSSclassifier=S | |||
|UniProt=F8WDF9 | |||
|association_with_transcript=0bp_to_ENST00000498449_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_8_at_SYNPR_5end | |||
|id=chr3:63428784..63428795,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.88e-18;2!UBERON:0006601;1.48e-12;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p8@SYNPR | |||
}} |
Revision as of 01:08, 13 September 2013
Short description: | p8@SYNPR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_SYNPR_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000498449_5end |
EntrezGene: | SYNPR |
HGNC: | 16507 |
UniProt: | F8WDF9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.