FFCP PHASE1:Hg19::chr7:139477461..139477472,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=28996|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14402|TSSclassifier=S|UniProt=Q9H2X6|association_with_transcript=44bp_to_ENST00000406875_5end|description=CAGE_peak_11_at_HIPK2_5end|id=chr7:139477461..139477472,-|ontology_enrichment_celltype=CL:0002057!1.40e-10!42;CL:0000860!9.12e-10!45;CL:0000839!4.84e-08!70;CL:0000557!2.74e-07!71|ontology_enrichment_celltype_v019=CL:0000860;5.42e-23;33!CL:0002057;5.42e-23;33!CL:0000473;4.63e-16;39!CL:0000234;4.63e-16;39!CL:0000576;1.15e-10;48!CL:0000766;3.49e-07;69|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-19,42;CL:0002057,5.41e-19,42;CL:0000473,6.29e-16,48;CL:0000234,6.29e-16,48;CL:0000839,5.55e-14,66;CL:0000557,1.10e-13,67;CL:0000766,2.50e-12,72;CL:0002194,1.13e-11,59;CL:0000576,1.13e-11,59;CL:0000040,1.13e-11,59;CL:0000559,1.13e-11,59;CL:0002009,3.93e-11,61|ontology_enrichment_development_v019=CL:0002057;4.08e-15;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.66e-16!115;UBERON:0000062!1.02e-12!511;UBERON:0001049!5.51e-12!57;UBERON:0005068!5.51e-12!57;UBERON:0006241!5.51e-12!57;UBERON:0007135!5.51e-12!57;UBERON:0000480!8.95e-12!626;UBERON:0000468!1.01e-11!659;UBERON:0000467!1.87e-11!625;UBERON:0002616!1.87e-11!59;UBERON:0000922!2.44e-11!612;UBERON:0001017!2.84e-11!82;UBERON:0002050!5.25e-11!605;UBERON:0005423!5.25e-11!605;UBERON:0000955!6.22e-11!69;UBERON:0006238!6.22e-11!69;UBERON:0005743!8.32e-11!86;UBERON:0000923!1.06e-10!604;UBERON:0005291!1.06e-10!604;UBERON:0006598!1.06e-10!604;UBERON:0002532!1.06e-10!604;UBERON:0003075!2.64e-10!86;UBERON:0007284!2.64e-10!86;UBERON:0000033!3.78e-10!123;UBERON:0000153!9.97e-10!129;UBERON:0007811!9.97e-10!129;UBERON:0003080!1.16e-09!42;UBERON:0000073!1.91e-09!94;UBERON:0001016!1.91e-09!94;UBERON:0002780!4.20e-09!41;UBERON:0001890!4.20e-09!41;UBERON:0006240!4.20e-09!41;UBERON:0002346!6.84e-09!90;UBERON:0002020!2.10e-07!34;UBERON:0003528!2.10e-07!34;UBERON:0003056!2.94e-07!61;UBERON:0001893!3.29e-07!34;UBERON:0004111!5.35e-07!241;UBERON:0002791!5.97e-07!33;UBERON:0002371!9.19e-07!80|ontology_enrichment_uberon_v019=UBERON:0002780;1.72e-09;41!UBERON:0001890;1.72e-09;41!UBERON:0000073;2.26e-09;53!UBERON:0002616;2.26e-09;53!UBERON:0003528;2.39e-09;34!UBERON:0002020;2.39e-09;34!UBERON:0001893;2.90e-09;34!UBERON:0002619;7.22e-09;22!UBERON:0002791;2.07e-08;32!UBERON:0000988;3.36e-08;3!UBERON:0001950;7.07e-08;20!UBERON:0000956;1.32e-07;25!UBERON:0000203;1.32e-07;25!UBERON:0001869;3.05e-07;32!UBERON:0001017;7.62e-07;75!UBERON:0002298;8.23e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.21e-16,114;UBERON:0003075,3.99e-16,82;UBERON:0007284,3.99e-16,82;UBERON:0001049,8.48e-16,56;UBERON:0005068,8.48e-16,56;UBERON:0006241,8.48e-16,56;UBERON:0007135,8.48e-16,56;UBERON:0000073,3.15e-15,53;UBERON:0002616,3.15e-15,53;UBERON:0002346,4.92e-15,86;UBERON:0000955,2.32e-14,68;UBERON:0006238,2.32e-14,68;UBERON:0002371,1.06e-13,76;UBERON:0001017,1.71e-13,81;UBERON:0002780,1.88e-13,41;UBERON:0001890,1.88e-13,41;UBERON:0003080,1.88e-13,41;UBERON:0006240,1.88e-13,41;UBERON:0001474,2.34e-13,82;UBERON:0001016,9.48e-13,89;UBERON:0003528,1.31e-12,34;UBERON:0002020,1.31e-12,34;UBERON:0004765,1.39e-11,90;UBERON:0002390,3.17e-11,98;UBERON:0003061,3.17e-11,98;UBERON:0010371,3.42e-11,104;UBERON:0001893,5.89e-11,34;UBERON:0001434,8.56e-11,100;UBERON:0002791,4.75e-10,32;UBERON:0002405,4.78e-10,93;UBERON:0003056,5.24e-10,61;UBERON:0002193,1.44e-09,108;UBERON:0002619,4.21e-09,22;UBERON:0010314,6.37e-09,132;UBERON:0001869,1.74e-08,32;UBERON:0001950,4.24e-08,20;UBERON:0000956,8.29e-08,25;UBERON:0000203,8.29e-08,25;UBERON:0005423,8.80e-08,581;UBERON:0000988,1.27e-07,3;UBERON:0004121,1.40e-07,171;UBERON:0000924,1.40e-07,171;UBERON:0006601,1.40e-07,171;UBERON:0000922,2.61e-07,592;UBERON:0000923,4.39e-07,560;UBERON:0010316,4.39e-07,560;UBERON:0005291,4.39e-07,560;UBERON:0006598,4.39e-07,560;UBERON:0010317,4.39e-07,560;UBERON:0002532,4.39e-07,560;UBERON:0002050,6.48e-07,564;UBERON:0000125,8.72e-07,9;UBERON:0002308,8.72e-07,9|phase1_expression=0.726713517082227,0.642301571672949,0.281908808191942,0,0,0,0,0.631719873426831,0.261185628199839,0,0.697801167972428,0,0.263766978228454,0.618831764800233,0.994192127183747,0,0,0,0,0,0.204000691244253,0,0,0.136874425072884,0.125542639594803,0.229240217243854,0.410502947249729,0.236132343941038,0,0,0,0,0,0.369754010166788,0,0,0,0,0.200544447470142,0.868043482863407,0.223915474239924,0,0.257575567634187,0.872389432677388,1.13362783106643,2.18325655069035,2.32429036905685,1.6446715520873,0.309706370895104,0.863077176966451,1.5369642391746,0.945928919554341,1.37898272294647,0.645484683583826,2.70852973188684,1.50593871634084,1.63743690034707,0.674170453335254,2.75475503133812,1.28371610830437,0.639337125799041,1.9791078011203,1.59570926097305,1.70489900213078,1.45104619314292,1.13477044938228,0,1.25624332628372,2.08593167368081,0,2.42159801053347,1.47311054395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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=28996 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14402 | |||
|TSSclassifier=S | |||
|UniProt=Q9H2X6 | |||
|association_with_transcript=44bp_to_ENST00000406875_5end | |||
|description=CAGE_peak_11_at_HIPK2_5end | |||
|id=chr7:139477461..139477472,- | |||
|ontology_enrichment_celltype=CL:0002057!1.40e-10!42;CL:0000860!9.12e-10!45;CL:0000839!4.84e-08!70;CL:0000557!2.74e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.42e-23;33!CL:0002057;5.42e-23;33!CL:0000473;4.63e-16;39!CL:0000234;4.63e-16;39!CL:0000576;1.15e-10;48!CL:0000766;3.49e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.41e-19,42;CL:0002057,5.41e-19,42;CL:0000473,6.29e-16,48;CL:0000234,6.29e-16,48;CL:0000839,5.55e-14,66;CL:0000557,1.10e-13,67;CL:0000766,2.50e-12,72;CL:0002194,1.13e-11,59;CL:0000576,1.13e-11,59;CL:0000040,1.13e-11,59;CL:0000559,1.13e-11,59;CL:0002009,3.93e-11,61 | |||
|ontology_enrichment_development_v019=CL:0002057;4.08e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p11@HIPK2 | |||
}} |
Revision as of 23:31, 13 September 2013
Short description: | p11@HIPK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_HIPK2_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000406875_5end |
EntrezGene: | HIPK2 |
HGNC: | 14402 |
UniProt: | Q9H2X6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.41e-19 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-19 | 42 |
defensive cell | 6.29e-16 | 48 |
phagocyte | 6.29e-16 | 48 |
myeloid lineage restricted progenitor cell | 5.55e-14 | 66 |
granulocyte monocyte progenitor cell | 1.10e-13 | 67 |
myeloid leukocyte | 2.50e-12 | 72 |
monopoietic cell | 1.13e-11 | 59 |
monocyte | 1.13e-11 | 59 |
monoblast | 1.13e-11 | 59 |
promonocyte | 1.13e-11 | 59 |
macrophage dendritic cell progenitor | 3.93e-11 | 61 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.