FFCP PHASE1:Hg19::chr12:81331512..81331533,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17787 | |||
|TSSclassifier=strong | |||
|UniProt=O14910 | |||
|association_with_transcript=25bp_to_ENST00000261203_5end | |||
|coexpression_cluster_id=C2243 | |||
|description=CAGE_peak_3_at_LIN7A_5end | |||
|id=chr12:81331512..81331533,- | |||
|ontology_enrichment_celltype=CL:0002057!8.27e-20!42;CL:0000860!8.97e-17!45;CL:0000766!1.00e-16!76;CL:0002194!7.41e-15!63;CL:0000576!7.41e-15!63;CL:0000040!7.41e-15!63;CL:0000559!7.41e-15!63;CL:0002009!1.46e-13!65;CL:0000839!1.50e-12!70;CL:0000557!6.68e-12!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-20;33!CL:0002057;2.62e-20;33!CL:0000576;2.96e-15;48!CL:0000473;3.55e-15;39!CL:0000234;3.55e-15;39!CL:0000766;7.40e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.07e-20,72;CL:0000860,2.86e-20,42;CL:0002057,2.86e-20,42;CL:0002194,3.07e-18,59;CL:0000576,3.07e-18,59;CL:0000040,3.07e-18,59;CL:0000559,3.07e-18,59;CL:0000473,3.28e-18,48;CL:0000234,3.28e-18,48;CL:0002009,6.66e-17,61;CL:0000839,3.04e-15,66;CL:0000557,6.64e-15,67;CL:0000763,3.49e-09,108;CL:0000049,3.49e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;7.12e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.41e-18!86;UBERON:0000073!2.33e-18!94;UBERON:0001016!2.33e-18!94;UBERON:0001017!1.18e-17!82;UBERON:0007023!5.06e-16!115;UBERON:0002616!1.17e-15!59;UBERON:0001049!9.98e-15!57;UBERON:0005068!9.98e-15!57;UBERON:0006241!9.98e-15!57;UBERON:0007135!9.98e-15!57;UBERON:0000955!2.50e-14!69;UBERON:0006238!2.50e-14!69;UBERON:0002346!3.16e-14!90;UBERON:0002390!1.78e-13!102;UBERON:0003061!1.78e-13!102;UBERON:0003075!1.39e-12!86;UBERON:0007284!1.39e-12!86;UBERON:0000468!2.92e-12!659;UBERON:0002780!3.21e-12!41;UBERON:0001890!3.21e-12!41;UBERON:0006240!3.21e-12!41;UBERON:0003080!5.59e-12!42;UBERON:0002371!9.85e-12!80;UBERON:0004765!1.06e-11!101;UBERON:0001434!1.06e-11!101;UBERON:0002193!1.81e-11!112;UBERON:0001474!2.49e-11!86;UBERON:0000922!8.15e-11!612;UBERON:0003056!1.95e-10!61;UBERON:0002020!3.36e-10!34;UBERON:0003528!3.36e-10!34;UBERON:0001869!5.21e-10!32;UBERON:0001893!7.18e-10!34;UBERON:0000033!7.96e-10!123;UBERON:0002791!1.14e-09!33;UBERON:0002050!1.71e-09!605;UBERON:0005423!1.71e-09!605;UBERON:0000924!2.68e-09!173;UBERON:0006601!2.68e-09!173;UBERON:0000923!3.46e-09!604;UBERON:0005291!3.46e-09!604;UBERON:0006598!3.46e-09!604;UBERON:0002532!3.46e-09!604;UBERON:0000153!4.93e-09!129;UBERON:0007811!4.93e-09!129;UBERON:0000956!9.16e-09!25;UBERON:0000203!9.16e-09!25;UBERON:0002405!3.29e-08!115;UBERON:0004121!3.58e-08!169;UBERON:0002619!5.30e-08!22;UBERON:0000467!7.03e-08!625;UBERON:0000480!1.06e-07!626;UBERON:0002204!2.06e-07!167;UBERON:0001950!3.04e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.38e-10;32!UBERON:0002791;7.91e-10;32!UBERON:0002780;1.01e-09;41!UBERON:0001890;1.01e-09;41!UBERON:0001893;1.25e-09;34!UBERON:0000956;1.28e-09;25!UBERON:0000203;1.28e-09;25!UBERON:0000073;1.53e-09;53!UBERON:0002616;1.53e-09;53!UBERON:0003528;1.57e-09;34!UBERON:0002020;1.57e-09;34!UBERON:0002619;9.29e-09;22!UBERON:0001950;6.50e-08;20!UBERON:0001017;4.91e-07;75!UBERON:0000955;5.53e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.72e-17,81;UBERON:0001016,8.01e-17,89;UBERON:0002346,4.97e-16,86;UBERON:0002390,7.73e-16,98;UBERON:0003061,7.73e-16,98;UBERON:0000073,1.00e-15,53;UBERON:0002616,1.00e-15,53;UBERON:0001049,2.59e-15,56;UBERON:0005068,2.59e-15,56;UBERON:0006241,2.59e-15,56;UBERON:0007135,2.59e-15,56;UBERON:0001434,7.23e-15,100;UBERON:0002371,2.00e-14,76;UBERON:0004765,3.47e-14,90;UBERON:0000955,3.65e-14,68;UBERON:0006238,3.65e-14,68;UBERON:0003075,3.71e-14,82;UBERON:0007284,3.71e-14,82;UBERON:0007023,4.51e-14,114;UBERON:0001474,3.38e-13,82;UBERON:0002780,4.30e-13,41;UBERON:0001890,4.30e-13,41;UBERON:0003080,4.30e-13,41;UBERON:0006240,4.30e-13,41;UBERON:0002193,6.54e-13,108;UBERON:0003056,1.29e-11,61;UBERON:0004121,4.67e-11,171;UBERON:0000924,4.67e-11,171;UBERON:0006601,4.67e-11,171;UBERON:0003528,7.66e-11,34;UBERON:0002020,7.66e-11,34;UBERON:0001869,1.27e-10,32;UBERON:0001893,1.76e-10,34;UBERON:0002791,2.32e-10,32;UBERON:0010371,1.10e-09,104;UBERON:0000923,1.22e-09,560;UBERON:0010316,1.22e-09,560;UBERON:0005291,1.22e-09,560;UBERON:0006598,1.22e-09,560;UBERON:0010317,1.22e-09,560;UBERON:0002532,1.22e-09,560;UBERON:0002405,1.25e-09,93;UBERON:0000956,1.30e-09,25;UBERON:0000203,1.30e-09,25;UBERON:0002050,1.68e-09,564;UBERON:0000922,2.09e-09,592;UBERON:0002204,4.74e-09,167;UBERON:0002619,9.20e-09,22;UBERON:0005423,9.81e-09,581;UBERON:0011216,1.50e-08,223;UBERON:0010314,4.51e-08,132;UBERON:0001950,6.47e-08,20;UBERON:0000479,8.59e-07,773 | |||
|phase1_expression=0.54503513781167,1.49870366723688,0.563817616383885,0,0,0,0,1.89515962028049,2.35067065379855,0.245733936501509,0,0,0,7.1784484716827,6.2965501388304,0,0,0,0,0.984968464614303,1.02000345622126,2.82109249330279,4.86601178122796,3.14811177667634,3.51519390865448,0,0,0,7.47392126012918,4.22212337906934,5.10893206943051,0,0,0,0,0,1.17440175733939,6.64794490238253,7.62068900386538,6.2933152507597,4.03047853631864,5.18229865630367,6.18181362322048,9.16008904311258,6.42389104270976,8.9756102639492,11.6214518452842,4.93401465626191,9.60089749774821,13.5215424391411,7.94098190240212,7.80391358632331,13.1003358679915,8.39130088658974,16.251178391321,12.8004790888971,6.00393530127261,9.21366286224847,10.7129362329816,8.34415470397843,13.4260796417799,8.90598510504134,8.7764009353518,7.2458207590558,13.0594157382863,5.6738522469114,6.85104473895132,12.5624332628372,6.77927793946262,11.2938199246661,16.345786571101,8.83866326370155,8.54448446090388,1.69004229049553,1.70083439972035,1.67726916406701,9.54793364745208,13.2155665700526,12.2151445889781,0.570025487482497,0.79566670879636,0.91332076882317,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0,1.32171328579026,1.68152568894461,2.37045676297569,0,0,0.205601498999509,0,0,0,0,0,0.589211814949674,0,0.812411591295047,0,0,0,0,0,0,0,0,0.226618685395132,0,0,0,0,0,0,0.301150238155546,0.255973222308837,0,0.710331756132051,0,0,0,0,2.43806866313962,1.34140171940727,1.40648818027883,1.44575660953827,4.51204119572301,1.01392563272577,0.795285947051099,0,3.49778823507051,2.4390233720882,1.49319135678314,1.5062593682237,0,0,0.97364218096405,1.39303789839414,0.132957960518865,0,0,0.74291500265913,0,0.860234595106124,0,0,0,1.37559020970034,0,0.516833518338658,0.71153252537342,0,0,0.760272105718513,0,0,0,6.51888016473782,4.4905874525234,3.49095589498299,1.53316637465883,0.949265659568129,0.549605231791222,11.8602375692457,15.511210565933,0,2.98183171017191,0.506522046658319,0,0.573673241497627,0.354668382198357,0,0,0.24666754841716,1.55605517699883,2.42479209725439,0.653847612453835,1.05950199351452,3.45705554687999,1.64025002283658,0,1.71141546463335,0.298897361103602,2.23125547423153,2.91371299862637,3.08991774744947,7.14539599392126,2.7023549808589,8.0594109317097,1.18800285728205,1.97813543422845,0,0,2.86171393721913,3.1279629967991,1.6623846929051,3.07284334616587,3.0648779579902,3.75595147266492,0.794025282120147,1.25572744982203,1.2813443329114,1.05965950579781,2.10063767259082,2.78241828943785,1.03056216018252,2.04728541964749,1.0126579934476,3.11798416515836,0.757301322732344,1.84099797284599,6.14255015911485,1.06502877754984,2.21654616100809,1.69560592310488,0,0,0,2.43947412259191,3.31324420803713,3.25343040034651,2.48786532036889,4.28945446488568,12.774207567654,0,0.643240938192885,0,8.8229906326076,8.66255378003503,0,0,0,0,0,0,0,0,0,0,0,1.2347220339942,0,3.80265104465493,1.96565443335525,3.54473944008842,0,6.51838724278502,2.40194934417936,0,0,0,0.0925884451585296,1.3032332212413,1.03993478527958,0,3.24605133930215,1.6437217193015,0.144366447761074,0,1.33177906564219,0.790204397959275,3.43394464837949,1.96973604869918,0,2.22946743433092,0,0,0,0,0,0,2.95597942737566,0,0,0.288239906833923,0,0.063497894292169,0,0,0,0,0,0,0.897048674762886,0.87192013766656,3.88692914851035,0.646358578788889,0,0.845302752556,0.26593811658487,0,1.02882949704857,0,0.799266537048298,2.28764789853036,1.08524321078289,0,0.325736184293735,1.42156779497018,0.791951872933429,0,0,0,1.2162378064119,1.50677127429638,0,0.958499421966331,1.14861935834114,4.27910715122155,1.44781306667579,1.64381058040307,0.358121926479791,0,0,0.215627574859517,0.128343036279748,4.06551398755941,10.4111883086097,4.63973287666617,6.03058555203656,5.10351001322531,18.7251755986796,26.9245313283622,52.2163546929405,12.7599151387905,16.0054566739097,5.69656549769445,2.9115920614313,2.49800584316026,0.788512075169673,0,2.70851489754947,0,4.1389228517002,0.664225598535437,1.84369168541703,1.99832313276591,2.15381273209015,0.686286847621712,2.48121631347465,6.03999762292127,1.81436848265855,0,0,0.604780586659361,0,0,0,0.128139149255701,1.53512174720011,0.160853921143607,0,0.154209693802656,0.710246901252508,2.05317890034523,0,0.697262270759755,8.21844257223031,0,0,1.37777337797528,2.73136752010076,1.96686622439136,0,0.462092022626489,0,0,2.42768746453614,0,0.340187410553031,4.96606607034921,3.08454505380579,0.812839312631559,1.00337954770971,0,0,0.223874754722178,0.219259876645935,1.3071772551245,7.43705362837529,0.656029291399411,6.18218949862176,3.19427136107939,0.457847324091717,0.330037999682352,0,0,0,1.35339005608971,2.00263202249038,3.53058451870098,1.92971201478343,3.54486808065303,3.91545073568417,1.87498580315422,1.33548053470106,0,0,0,0,1.39453664789186,1.5740617341532,0,0,0,0,0,0.429374660225974,3.34942532423701,5.37845022021834,2.66882271493355,0.255897791311334,6.41908482050881,0.318203247925937,0,1.07923474549989,1.64722217841633,1.7671860351853,0,0,0,0,0,0,0.9554993798559,3.67654123079653,1.13008116620243,0,0,0,0.578775534266688,5.24715801637306,0.405820753925408,0,0.281695602532241,4.30234056612155,5.1089501326823,0.35667105148125,0.354761064070598,1.26664581178598,0.329294892959902,2.27683904259429,2.0996083214699,0,0,0,3.48332062874083,0,0,0,0,10.6563997938756,5.35246044999663,6.26611905891579,5.00286728461357,4.93634727703433,6.48473311192717,7.56044012133361,6.34500141035416,0,2.88743956579008,0,0,0,0,0,0,0,0,5.51857298466744,7.58152380906339,0,27.5756616560521,0,0,0,0,0,0,10.1389452221791,11.1838053946208,13.5147804786646,0,0,0,0,0,0,2.8071081061233,2.3441308683503,0,0,0,0,1.78178808499583,0,13.9180670687282,8.72150381745179,0.779160935160341,0,0,0,2.21027132424918,7.306049687774,0.306806047506464,18.9550600410047,1.24415835064723,0,0,0,2.76201535783414,2.3948309234694,5.55684950723184,3.87733098438087,6.02992638052033,3.99227596002388,11.198393726665,1.31189999994294,0.724999575434793,0,0,0,6.89486746482929,18.6626952565283,28.9953741538598,4.42870692906919,8.80354001965478,16.7839909948792,29.9669794413619,11.8219047581419,5.92340572315726,0,0,6.38687145581516,0,0,0,0,0,1.55715908783166,0,0,9.10485487091144,0.166211681900156,0,0,0,0,0,0.632994193584081,0,0.565412285735763,2.16388639742091,0.995261931078505,1.14994833854341,4.27721101453538,1.18608451472249,1.11207545051853,0.730953646538188,1.28062152663286,0.802577647298789,4.2167600230561,0,0.391329237864179,0,0,2.41981432097328,5.20323694771833,3.1593289814244,0.751617097072463,1.45163467956146,0.664653872707185,0,0,0,3.41531455235751,0,0,0,0,1.22308667769421,0,0,0,0,0.969890164884194,34.9494261698341,6.10148000107438,0,1.58971689362392,3.16553979779394,0,0.561111741760736,1.92107695265417,0,0,3.32156128881155,4.97625493799697,0,0.124252535565433,0,0.815425236441684,0.313808538937,0.101998217636322,0.577901179803038,0.600420288709789,1.09524303113594,2.55493176133945,0,2.10309883423452,3.35138881526705,2.52076466412852,2.15361907373044,1.39775300349294,0,1.33902874465124,5.3746777989381,0,1.16495949527454,4.72699093843342,3.70871362715249,4.04421263125109,7.28363363209141,7.36657988972325,5.56660782866512,5.31193283835145,2.89355667237035,3.16340704173638,5.81616473240859,0,0,3.34122561619136,0,2.99461687736953,2.04572893726493,0,7.53006825197948,0,0.714695326373367,2.64836788146173,0,1.62899880526114,0,3.5924609612035,0,0,6.13396878427518,0,3.3707013745959,0,2.97350799631566,3.70251284879532,2.05304205461195,0,2.88326013932776,8.01741956008296,1.65695622138878,4.46549419630756,0,0,0,2.1760712134779,0.5013797880454,1.22538230705385,4.59021682993726,10.051462160015,6.2024772597689,8.29778601333349,4.00610978260799,2.86704597845036,4.32623300993724,1.73869928235874,7.05578038174777,0,0,0,0,4.68334905806882,2.75349954360568,2.08956724041624,0,0,2.46223906857616,3.52195062453605,5.33886732957922,0,0.453692771289717,0.777186002913902,0,0,0.449803112163605,0.310525913752519,0.414706207840855,0.53168342911599,0,0.601030435988874,0,0,0,0.322231671127465,0,0,0.400027764663154,0.686791410365586,4.04099386519103,3.78554694685953,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0,0,4.09986429740715,0,0,3.45646090379327,0,0,0,0,1.72041036127604,0.211312123358627,4.99968489637325,15.4703008056504,0,0,0.368211900503681,0,1.24415452006595,12.5336483877579,2.15649622793364,0.314531883711793,2.73024095480035,4.58277830875868,30.823363414744,5.5771093916551,8.37967376959866,0.318004350653419,0,2.40171224485641,1.76337971845342,5.5124185923576,3.21146125482298,9.91876034279095,3.99084647642878,4.30744364905586,2.01657356977374,3.66533438060355,5.00574501458738,1.42769420259154,0,0,0,0,0,0.690359926060101,0,3.45967510406583,0,0,0,0,0,3.17426647706455,3.90539049306924,7.02735108104026,2.21955335678674,3.82882366312754,0,2.48105589194647,11.2557596390157,0.638812138197976,6.96412386641773,29.5929675552565,4.24875922965642,5.91921697513374,0.887023701626388,13.1366745813588,0,3.73833531372574,1.90741043332262,0,0,2.66876515691748,7.8557794958001,0,1.82631744101899,2.37520350340484,0,3.35939757630285,0,0,4.34645680756449,10.4222477414933,0,0,0,0,0.118332000730565,0,0.423387050190929,0.22910686854405,0.93061915699296,0.955538938977433,0,0,1.82876887473404,0,0.923965261706223,0,2.91426595835484,1.87151570769685,0,1.30812099855325,15.6995054034154,11.7636352917609,6.79332796050031,0.540219106755613,1.96703604453562,0,3.92237314806249,0.471353094203252,0.588925401344836,2.0793248022896,2.5359343655004,1.0195626881269,2.6315497034359,1.09578409555081,0,0,0,0,0.730336388246517,0.917458566809082,1.57673541466596,0.315543124386369,1.49581278420012,4.79985759374415,2.645134202577,4.83593523616777,2.31087814315709,1.73050624849516,0,0.874124575709564,0,0,0,0,0.250707539292375,1.81868875723775,1.33982065078089,3.31667775783512,2.27552590896169,1.91910583710883,1.1903221573187,0.0645889098360061,0.620747142958579,0.224263725161227,1.2729431655633,1.0105859447911,1.74173398317569,0.684466602170562,0.606168477131288,1.00411087549747,1.66330178273007,0.732629417498771,0.533636729388577,3.8614456457388,0.449126010532934,4.69281884806909,5.37862354404612,8.54481974463051,4.66029741929859,2.01273793591026,4.48795889224526 | |||
|short_description=p3@LIN7A | |||
}} |
Revision as of 14:55, 11 January 2014
Short description: | p3@LIN7A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIN7A_5end |
Coexpression cluster: | C2243_extraskeletal_pineal_Neutrophils_cerebellum_small_large_Prostate |
Association with transcript: | 25bp_to_ENST00000261203_5end |
EntrezGene: | LIN7A |
HGNC: | 17787 |
UniProt: | O14910 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.07e-20 | 72 |
classical monocyte | 2.86e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.86e-20 | 42 |
monopoietic cell | 3.07e-18 | 59 |
monocyte | 3.07e-18 | 59 |
monoblast | 3.07e-18 | 59 |
promonocyte | 3.07e-18 | 59 |
defensive cell | 3.28e-18 | 48 |
phagocyte | 3.28e-18 | 48 |
macrophage dendritic cell progenitor | 6.66e-17 | 61 |
myeloid lineage restricted progenitor cell | 3.04e-15 | 66 |
granulocyte monocyte progenitor cell | 6.64e-15 | 67 |
myeloid cell | 3.49e-09 | 108 |
common myeloid progenitor | 3.49e-09 | 108 |