FFCP PHASE1:Hg19::chr15:83378614..83378634,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8120 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=567 | |||
|TSSclassifier=strong | |||
|UniProt=F5H0E6,Q13367 | |||
|association_with_transcript=0bp_to_ENST00000535385,ENST00000535513,ENST00000560529,NM_004644,uc010uoh.1,uc010uoi.1,uc010uoj.1,uc010uok.1_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_AP3B2_5end | |||
|id=chr15:83378614..83378634,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000540;5.40e-07;6!CL:0000404;5.40e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,9.91e-09,8;CL:0000540,5.46e-07,6;CL:0000031,5.46e-07,6;CL:0000404,5.46e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.22e-14;82!CL:0000031;5.40e-07;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:169,8.56e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.17e-39!94;UBERON:0001016!1.17e-39!94;UBERON:0001017!2.05e-38!82;UBERON:0005743!8.41e-38!86;UBERON:0000955!3.73e-31!69;UBERON:0006238!3.73e-31!69;UBERON:0001049!6.69e-31!57;UBERON:0005068!6.69e-31!57;UBERON:0006241!6.69e-31!57;UBERON:0007135!6.69e-31!57;UBERON:0002616!2.37e-28!59;UBERON:0002780!6.64e-26!41;UBERON:0001890!6.64e-26!41;UBERON:0006240!6.64e-26!41;UBERON:0002346!1.60e-25!90;UBERON:0003075!9.08e-25!86;UBERON:0007284!9.08e-25!86;UBERON:0003080!1.22e-24!42;UBERON:0000924!5.00e-23!173;UBERON:0006601!5.00e-23!173;UBERON:0007023!2.88e-22!115;UBERON:0004121!3.47e-22!169;UBERON:0002020!9.45e-22!34;UBERON:0003528!9.45e-22!34;UBERON:0001893!1.06e-21!34;UBERON:0002791!5.03e-21!33;UBERON:0001869!8.13e-21!32;UBERON:0003056!2.65e-19!61;UBERON:0000033!1.72e-18!123;UBERON:0002619!5.58e-17!22;UBERON:0000153!9.02e-17!129;UBERON:0007811!9.02e-17!129;UBERON:0000956!1.39e-16!25;UBERON:0000203!1.39e-16!25;UBERON:0001950!1.10e-15!20;UBERON:0000922!1.50e-12!612;UBERON:0000062!6.28e-12!511;UBERON:0000468!2.03e-11!659;UBERON:0002050!5.70e-11!605;UBERON:0005423!5.70e-11!605;UBERON:0000923!9.82e-11!604;UBERON:0005291!9.82e-11!604;UBERON:0006598!9.82e-11!604;UBERON:0002532!9.82e-11!604;UBERON:0000480!4.95e-08!626;UBERON:0000467!6.76e-08!625;UBERON:0003076!1.80e-07!15;UBERON:0003057!1.80e-07!15;UBERON:0000475!5.21e-07!365;UBERON:0001871!7.18e-07!7;UBERON:0002420!7.50e-07!9;UBERON:0007245!7.50e-07!9;UBERON:0010009!7.50e-07!9;UBERON:0010011!7.50e-07!9;UBERON:0000454!7.50e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.13e-30;41!UBERON:0001890;9.13e-30;41!UBERON:0001869;1.20e-29;32!UBERON:0003528;2.14e-29;34!UBERON:0002020;2.14e-29;34!UBERON:0001893;2.31e-29;34!UBERON:0002791;2.73e-29;32!UBERON:0002619;3.78e-28;22!UBERON:0000073;8.72e-28;53!UBERON:0002616;8.72e-28;53!UBERON:0001950;6.70e-26;20!UBERON:0000956;1.35e-25;25!UBERON:0000203;1.35e-25;25!UBERON:0001017;3.05e-22;75!UBERON:0000955;4.41e-22;68!UBERON:0001016;1.41e-21;83!UBERON:0002420;9.53e-11;9!UBERON:0007245;9.53e-11;9!UBERON:0010009;9.53e-11;9!UBERON:0010011;9.53e-11;9!UBERON:0000454;9.53e-11;9!UBERON:0000125;2.47e-10;9!UBERON:0002308;2.47e-10;9!UBERON:0004732;7.19e-10;13!UBERON:0001871;1.54e-09;6!UBERON:0004733;5.51e-09;12!UBERON:0002028;5.51e-09;12!UBERON:0011216;8.32e-09;132!UBERON:0000200;1.09e-08;6!UBERON:0001894;1.51e-08;7!UBERON:0009663;2.80e-08;7!UBERON:0007023;5.54e-08;114!UBERON:0002298;1.46e-07;6!UBERON:0001872;1.76e-07;5!UBERON:0000349;1.93e-07;5!UBERON:0002021;2.41e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.00e-63,89;UBERON:0001017,9.87e-61,81;UBERON:0001049,2.37e-52,56;UBERON:0005068,2.37e-52,56;UBERON:0006241,2.37e-52,56;UBERON:0007135,2.37e-52,56;UBERON:0000073,1.45e-49,53;UBERON:0002616,1.45e-49,53;UBERON:0000955,2.59e-48,68;UBERON:0006238,2.59e-48,68;UBERON:0002780,9.19e-42,41;UBERON:0001890,9.19e-42,41;UBERON:0003080,9.19e-42,41;UBERON:0006240,9.19e-42,41;UBERON:0003075,5.73e-38,82;UBERON:0007284,5.73e-38,82;UBERON:0002346,2.23e-36,86;UBERON:0003528,1.37e-34,34;UBERON:0002020,1.37e-34,34;UBERON:0001893,1.66e-34,34;UBERON:0001869,5.78e-33,32;UBERON:0002791,1.87e-32,32;UBERON:0004121,1.96e-31,171;UBERON:0000924,1.96e-31,171;UBERON:0006601,1.96e-31,171;UBERON:0003056,1.33e-30,61;UBERON:0010371,5.68e-30,104;UBERON:0002619,4.04e-28,22;UBERON:0011216,7.81e-27,223;UBERON:0001950,7.01e-26,20;UBERON:0000956,1.13e-25,25;UBERON:0000203,1.13e-25,25;UBERON:0007023,2.07e-22,114;UBERON:0010314,5.92e-19,132;UBERON:0003076,1.43e-11,15;UBERON:0003057,1.43e-11,15;UBERON:0002420,1.12e-10,9;UBERON:0007245,1.12e-10,9;UBERON:0010009,1.12e-10,9;UBERON:0010011,1.12e-10,9;UBERON:0000454,1.12e-10,9;UBERON:0000125,2.82e-10,9;UBERON:0002308,2.82e-10,9;UBERON:0004732,6.16e-10,13;UBERON:0001871,1.58e-09,6;UBERON:0004733,4.73e-09,12;UBERON:0002028,4.73e-09,12;UBERON:0007277,4.73e-09,12;UBERON:0000025,5.95e-09,192;UBERON:0000200,1.10e-08,6;UBERON:0001894,1.48e-08,7;UBERON:0006222,1.48e-08,7;UBERON:0000922,2.85e-08,592;UBERON:0009663,3.25e-08,7;UBERON:0002298,1.40e-07,6;UBERON:0001872,1.72e-07,5;UBERON:0000349,2.03e-07,5;UBERON:0002021,2.45e-07,5;UBERON:0005423,6.27e-07,581;UBERON:0000923,9.51e-07,560;UBERON:0010316,9.51e-07,560;UBERON:0005291,9.51e-07,560;UBERON:0006598,9.51e-07,560;UBERON:0010317,9.51e-07,560;UBERON:0002532,9.51e-07,560;UBERON:0002050,9.53e-07,564 | |||
|phase1_expression=0.181678379270557,0.856402095563933,0.986680828671798,0,1.34088328328186,0.872338524100369,2.53299878168311,1.26343974685366,5.22371256399677,0,0,0,0.263766978228454,0.123766352960047,0.331397375727916,0.672325146451775,0,0.730310090387373,0,0.369363174230364,0,1.56727360739044,0.286235987131057,1.64249310087461,0.376627918784408,0,0,0,0,0,0.464448369948228,0,0,0,0,0,0.293600439334847,0,0.200544447470142,0,0,0.647787332037959,0.257575567634187,1.30858414901608,0,0.727752183563449,0.929716147622738,0,2.47765096716083,1.1507695692886,1.2808035326455,0.47296445977717,3.10271112662957,3.87290810150296,6.77132432971709,0.752969358170419,0.272906150057846,0.898893937780338,1.22433556948361,0.962787081228281,0.639337125799041,0.329851300186716,0.398927315243264,0.426224750532694,2.03146467040009,3.97169657283798,2.4912889959823,1.50749199154046,0.521482918420201,0.868755378820466,3.02699751316684,3.31449872388808,3.79754864929061,0,0,0.419317291016752,0.112328631146495,0,0.32145117339416,0.285012743741249,0,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0.267440195783507,0.144824403882799,2.43806866313962,0.670700859703636,0.12786256184353,0,0,1.59331170856906,0,1.45990461090791,0.283604451492204,0,0.087834785693126,6.09052701064364,0,2.59549109949101,0.649094787309367,0.870648686496336,0.132957960518865,0,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0.286836620748814,0,0,0,0,0.933633106199299,0,0,1.51357427644931,1.15235184896,0.70296429550139,0,0,0.597794722207204,0,0.161872944368132,0,0,0.122834317311768,0.413303124703062,0,0,0,0,0,0.250237039743928,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0.103052529238439,1.03056216018252,0.18611685633159,0,0.0974370051611986,0.252433774244115,0.0920498986422993,0,0,0,0.169560592310488,0.193260853163297,0,0,2.19552671033272,1.59035721985782,1.62671520017326,1.55491582523056,2.27088765788066,2.18986415445498,0,0,0,0.464367928031979,0.721879481669586,0.236613600079688,0,0,0.220587945464788,0.217879444092406,0.474541238222193,0.134831308160164,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.441463099414651,0.491953754172454,0.171567810298526,0.219500570817251,0,0.301586917234893,0.185176890317059,0,0,0,0.927443239800615,0.234817388471643,0,0,0,3.1608175918371,1.71697232418975,0,0,0.148631162288728,0,0.839910640994298,0.141775097242386,0.358234090811393,2.3250715081117,0.766765358330422,0,0,0,0,0.12624243342638,0.317489471460845,0.381988425558278,0,1.71072446022705,0.102827492703324,0.300343057843917,0.285826432630578,0,0,0.07333828582095,0.387815147273333,0,0,0,0,0,1.41849132023278,0,0.714889968290738,0.542621605391443,0.823240336780769,0,0.710783897485092,0.791951872933429,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.410952645100767,0.537182889719687,0,0,0.215627574859517,0.513372145118994,3.81141936333695,16.9181810014908,17.0123538811093,18.7618217174471,8.29320377149112,0.749007023947182,0,1.65766205374414,0.858840442033979,0.500170521059677,0,0,0.356857977594324,0,0.117141414992713,0.300946099727719,0,0,0,0,0.347534457872331,0.195801157462741,0.686286847621712,0.206768026122887,0.215714200818617,0,1.5156378572313,0,0,0.248107807818777,0.767309866440312,1.12264037773229,0.256278298511402,0,0.160853921143607,0,0.308419387605311,0,0.164254312027618,0,0,0.362578348774867,0.802025881213139,0.276242966807689,0.803701137152247,0.182091168006717,0.655622074797121,0,0.231046011313244,0,1.46139224653261,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0.650756789328606,0.103041011647722,0.183138929636687,0.330037999682352,1.14853107599234,0,0,0.096670718292122,1.07834031980251,0.460511024178389,0.137836572484531,0.322260734604821,0.290033387828457,0.0852266274161009,0.178064071293475,0.165284915360978,0,0.510450849978337,0.6069466851333,0,0,0,0,2.12922412126809,0,0.18532421910392,0,0,0.316379424718726,0.38126038784765,0.255897791311334,0,0,0,0,0.274537029736055,0.235624804691373,0.202182481573316,0,0,0,0,0,0.682499557039929,1.27264888758341,0,0,0,0,0,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.196498082026242,0,0,0,0.329294892959902,0.75894634753143,0.349934720244983,0.0962221127255121,1.34060455107157,0,0.282431402330337,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,5.87532391201102,0,0,0,0,0.0711418433484141,4.94221445459349,0.199579371432817,0,0,0,0,0,0.313359791546046,0,0,0,0.605399121573143,15.3304645568517,0,0.307240764308458,0.447352215784832,0.333698283423817,0.586164286206121,0,0,0,0,0,0,0.586032717087576,1.09224469574562,0,0,0,0,0,44.7366441494834,39.8094448441751,0.222617410045812,0,1.47787785689595,0.398495976502139,1.10513566212459,12.0927718970052,0.306806047506464,0.123084805461069,0,0,0.358042349351218,0,0.986434056369336,0,0,38.7733098438087,21.6149668717113,33.934345660203,0.7812832832557,0,0,1.593108275997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| |||
|short_description=p1@AP3B2 | |||
}} |
Revision as of 00:55, 12 January 2014
Short description: | p1@AP3B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AP3B2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000535385, ENST00000535513, ENST00000560529, NM_004644, uc010uoh.1, uc010uoi.1, uc010uoj.1, uc010uok.1_5end |
EntrezGene: | AP3B2 |
HGNC: | 567 |
UniProt: | F5H0E6Q13367 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 9.91e-09 | 8 |
neuron | 5.46e-07 | 6 |
neuroblast | 5.46e-07 | 6 |
electrically signaling cell | 5.46e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 8.56e-07 | 6 |