FFCP PHASE1:Hg19::chr3:159557825..159557857,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29970 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15678 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000483730_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SCHIP1_5end | |||
|id=chr3:159557825..159557857,+ | |||
|ontology_enrichment_celltype=CL:0002319!3.16e-10!25;CL:0000047!3.94e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002319;1.37e-12;25!CL:0000540;1.35e-09;6!CL:0000404;1.35e-09;6!CL:0002322;2.20e-07;5!CL:0002321;5.99e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.31e-12,25;CL:0000047,4.97e-12,8;CL:0000133,3.21e-11,59;CL:0000540,1.70e-09,6;CL:0000031,1.70e-09,6;CL:0000404,1.70e-09,6;CL:0000221,5.02e-08,72;CL:0002322,2.15e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.19e-15;82!CL:0000031;1.35e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.45e-61!94;UBERON:0001016!4.45e-61!94;UBERON:0005743!8.37e-57!86;UBERON:0001017!2.47e-54!82;UBERON:0001049!1.43e-50!57;UBERON:0005068!1.43e-50!57;UBERON:0006241!1.43e-50!57;UBERON:0007135!1.43e-50!57;UBERON:0002616!8.80e-45!59;UBERON:0003075!5.74e-43!86;UBERON:0007284!5.74e-43!86;UBERON:0000955!7.17e-43!69;UBERON:0006238!7.17e-43!69;UBERON:0007023!4.11e-42!115;UBERON:0002346!7.90e-40!90;UBERON:0004121!9.48e-40!169;UBERON:0002780!5.77e-39!41;UBERON:0001890!5.77e-39!41;UBERON:0006240!5.77e-39!41;UBERON:0000924!5.81e-38!173;UBERON:0006601!5.81e-38!173;UBERON:0003080!1.26e-37!42;UBERON:0003056!1.40e-34!61;UBERON:0001893!2.47e-33!34;UBERON:0002020!2.73e-33!34;UBERON:0003528!2.73e-33!34;UBERON:0002791!2.45e-32!33;UBERON:0001869!1.36e-31!32;UBERON:0000033!7.04e-31!123;UBERON:0000153!1.07e-30!129;UBERON:0007811!1.07e-30!129;UBERON:0000956!1.35e-24!25;UBERON:0000203!1.35e-24!25;UBERON:0002619!4.27e-22!22;UBERON:0001950!3.86e-20!20;UBERON:0000025!2.71e-14!194;UBERON:0003076!1.23e-13!15;UBERON:0003057!1.23e-13!15;UBERON:0004111!1.12e-12!241;UBERON:0000477!7.08e-12!286;UBERON:0004732!7.13e-12!13;UBERON:0000922!7.49e-12!612;UBERON:0000483!2.00e-11!309;UBERON:0000119!2.39e-11!312;UBERON:0004733!5.57e-11!12;UBERON:0002028!5.57e-11!12;UBERON:0007277!5.57e-11!12;UBERON:0002420!2.20e-10!9;UBERON:0007245!2.20e-10!9;UBERON:0010009!2.20e-10!9;UBERON:0010011!2.20e-10!9;UBERON:0000454!2.20e-10!9;UBERON:0000468!3.64e-10!659;UBERON:0002308!4.57e-10!9;UBERON:0000125!4.57e-10!9;UBERON:0000064!2.82e-09!219;UBERON:0002050!2.88e-09!605;UBERON:0005423!2.88e-09!605;UBERON:0000923!5.70e-09!604;UBERON:0005291!5.70e-09!604;UBERON:0006598!5.70e-09!604;UBERON:0002532!5.70e-09!604;UBERON:0000467!7.53e-09!625;UBERON:0000480!9.37e-09!626;UBERON:0002680!1.33e-08!9;UBERON:0001895!1.33e-08!9;UBERON:0010092!1.33e-08!9;UBERON:0009663!2.44e-08!7;UBERON:0000200!9.78e-08!6;UBERON:0000481!1.34e-07!347;UBERON:0000475!3.16e-07!365;UBERON:0001871!3.44e-07!7;UBERON:0001894!5.54e-07!7;UBERON:0006222!5.54e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.85e-45;34!UBERON:0001869;4.07e-45;32!UBERON:0003528;4.24e-45;34!UBERON:0002020;4.24e-45;34!UBERON:0002791;5.77e-45;32!UBERON:0002780;5.08e-42;41!UBERON:0001890;5.08e-42;41!UBERON:0000073;3.19e-40;53!UBERON:0002616;3.19e-40;53!UBERON:0000956;9.87e-39;25!UBERON:0000203;9.87e-39;25!UBERON:0002619;9.94e-35;22!UBERON:0001950;1.31e-31;20!UBERON:0000955;3.66e-28;68!UBERON:0001017;1.06e-27;75!UBERON:0001016;1.16e-26;83!UBERON:0002420;1.19e-15;9!UBERON:0007245;1.19e-15;9!UBERON:0010009;1.19e-15;9!UBERON:0010011;1.19e-15;9!UBERON:0000454;1.19e-15;9!UBERON:0000125;4.37e-15;9!UBERON:0002308;4.37e-15;9!UBERON:0004732;1.09e-13;13!UBERON:0009663;2.24e-12;7!UBERON:0004733;2.53e-12;12!UBERON:0002028;2.53e-12;12!UBERON:0000200;1.96e-11;6!UBERON:0011216;2.40e-10;132!UBERON:0007023;3.54e-10;114!UBERON:0002021;8.27e-10;5!UBERON:0001872;1.26e-09;5!UBERON:0000349;2.02e-09;5!UBERON:0002298;2.25e-09;6!UBERON:0001871;3.01e-09;6!UBERON:0002680;1.15e-08;9!UBERON:0001895;1.15e-08;9!UBERON:0001894;4.79e-08;7!UBERON:0000369;5.06e-08;4!UBERON:0002435;5.06e-08;4!UBERON:0000204;5.06e-08;4!UBERON:0010314;5.31e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.27e-84,89;UBERON:0001017,1.03e-78,81;UBERON:0001049,3.40e-75,56;UBERON:0005068,3.40e-75,56;UBERON:0006241,3.40e-75,56;UBERON:0007135,3.40e-75,56;UBERON:0000073,1.35e-70,53;UBERON:0002616,1.35e-70,53;UBERON:0000955,1.61e-62,68;UBERON:0006238,1.61e-62,68;UBERON:0003075,2.25e-62,82;UBERON:0007284,2.25e-62,82;UBERON:0002780,2.84e-59,41;UBERON:0001890,2.84e-59,41;UBERON:0003080,2.84e-59,41;UBERON:0006240,2.84e-59,41;UBERON:0002346,1.42e-58,86;UBERON:0001893,9.92e-53,34;UBERON:0003528,1.17e-52,34;UBERON:0002020,1.17e-52,34;UBERON:0003056,1.88e-52,61;UBERON:0001869,6.16e-50,32;UBERON:0002791,9.04e-50,32;UBERON:0010371,5.03e-49,104;UBERON:0004121,7.62e-48,171;UBERON:0000924,7.62e-48,171;UBERON:0006601,7.62e-48,171;UBERON:0000956,1.01e-38,25;UBERON:0000203,1.01e-38,25;UBERON:0010314,9.27e-37,132;UBERON:0002619,1.02e-34,22;UBERON:0007023,1.65e-32,114;UBERON:0001950,1.38e-31,20;UBERON:0011216,5.43e-31,223;UBERON:0003076,1.80e-16,15;UBERON:0003057,1.80e-16,15;UBERON:0000025,8.43e-16,192;UBERON:0002420,1.29e-15,9;UBERON:0007245,1.29e-15,9;UBERON:0010009,1.29e-15,9;UBERON:0010011,1.29e-15,9;UBERON:0000454,1.29e-15,9;UBERON:0000125,4.13e-15,9;UBERON:0002308,4.13e-15,9;UBERON:0004732,9.80e-14,13;UBERON:0004733,2.31e-12,12;UBERON:0002028,2.31e-12,12;UBERON:0007277,2.31e-12,12;UBERON:0009663,2.32e-12,7;UBERON:0000200,2.10e-11,6;UBERON:0004111,1.92e-10,240;UBERON:0002021,8.51e-10,5;UBERON:0000922,1.29e-09,592;UBERON:0001872,1.36e-09,5;UBERON:0000483,1.96e-09,306;UBERON:0000349,2.02e-09,5;UBERON:0002298,2.12e-09,6;UBERON:0001871,2.95e-09,6;UBERON:0000119,3.58e-09,309;UBERON:0002680,1.08e-08,9;UBERON:0001895,1.08e-08,9;UBERON:0010092,1.08e-08,9;UBERON:0000923,2.63e-08,560;UBERON:0010316,2.63e-08,560;UBERON:0005291,2.63e-08,560;UBERON:0006598,2.63e-08,560;UBERON:0010317,2.63e-08,560;UBERON:0002532,2.63e-08,560;UBERON:0002050,4.61e-08,564;UBERON:0001894,4.64e-08,7;UBERON:0006222,4.64e-08,7;UBERON:0000369,5.20e-08,4;UBERON:0002435,5.20e-08,4;UBERON:0000204,5.20e-08,4;UBERON:0010082,5.20e-08,4;UBERON:0005423,1.86e-07,581 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0.123766352960047,0,0,0,0,0,0.369363174230364,0.612002073732759,1.56727360739044,7.44213566540748,4.10623275218653,5.52387614217132,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,4.40400659002271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64342657158052,1.68152568894461,3.16060901730092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.68685786939865,1.55210578223795,2.72287835648691,2.29213382120997,0,0,0,0,0,0.953962497221368,2.28797964312051,2.22874500797739,1.19257444420023,0.860234595106124,1.73570250803797,0.56530794192401,0.419499436209906,0,0.626984899610432,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0.302714855289863,0,0.234321431833797,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07355300420312,3.84336328132307,2.78865462886844,3.00617059544574,4.54177531576131,4.01475094983413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,0,10.8974580676572,0.70445216541493,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0.268675568108545,0.581267877027924,0.383382679165211,0,0.088048434013226,0.207328115540772,1.72943944100354,1.00993946741104,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,3.90419561572865,9.27946575333234,9.54842712405788,15.3105300396759,0,0,0,0.24538298343828,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114814448164607,0,0.131124414959424,0,0.308061348417659,0,0,0.527758144464379,0,1.02056223165909,0.647747748306418,0,0.541892875087706,0,0.254876273045038,0,0.223874754722178,0,0,1.28225062558195,0.656029291399411,0.325378394664303,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.275673144969061,0.644521469209642,0.435050081742686,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.08016598537319,0,3.65036331547496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0.890894042497916,0,16.9005100120271,14.0669416410513,0,0,0,0.597743964753209,0.276283915531148,0,1.53403023753232,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,19.3866549219044,12.8019975463355,7.98455192004777,0,0,0,0,0,0,8.27384095779515,0,3.12524990879926,15.0576035588353,14.2303797577981,19.8356257212208,16.1445719499588,16.2551190424451,14.9182070064701,0,0,0.384751292518985,0,0.46112780877612,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.707660516026713,1.83309043480088,0,0,0,5.25728837249281,0,11.9474867319923,0,0,0,0.394584402849391,0,4.59109142445735,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.193978032976839,0,4.97157629717171,0,0,10.7628353124994,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,0,0,17.4121883725839,5.47621515567972,2.55493176133945,0,0,0,0.229160424011684,0,0.199679000498991,2.57535628881943,0.223171457441873,1.20930250476107,0,0,0,0,0,0,0,14.3141344165675,9.80664524003344,1.12527203925513,5.08895915409765,3.32352270423348,0,0,9.78067862194197,0,0.551639951094387,1.10154635083496,0,0,0,0,1.32418394073086,0,0,0,0,0,0,0,0,0,0,8.66195807622389,5.55376927319298,0,0,0.640724475406168,0.78602152549833,0,0,0,0.852548188666271,0,0,0,0,0,0,23.0377726791416,25.2594368347064,16.9007756453775,4.58727356552057,5.21366542223206,4.34674820589684,0,1.24980407962107,0,0,0,12.1767075509789,10.8690771458119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.0284839452006,0,0,0,0,0,0,0,0,0,0,0,0,0,9.59207784777388,5.60689019262745,2.51625506969434,16.9274939197622,0,0,0,0,0,0,5.60399523799829,0,0,8.54248693782912,25.5053837386053,10.2165669796577,22.3576837022423,14.3680866846379,11.2726321516675,20.8303582865088,8.56616521554926,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,11.4813893851271,20.30803056396,13.6413285690781,8.05380789462617,23.5199167877834,0,0,0,0,0.535701835878287,1.3451348888753,2.42786241694653,7.51285231459282,0,0.230467975111559,0,4.0781839786099,10.1290071286788,0,0,0.078493092850514,18.3825240201722,0,5.47895232305697,0,0,1.6439605160631,0,0,1.39086617842064,0.801711364730253,0.62164849248911,1.3657478167516,0.691259661814092,0,1.77498001095848,0.937347452350735,0.846774100381858,0,0,0,0,0,0,7.12171720906684,2.36124455769368,0,0.485710993059139,0,8.1569817816161,0.356760272332706,0,2.08886981816315,4.07599677630019,0.154348316215889,1.09279780251979,0,0,0,13.5452842309312,4.1586496045792,9.2984260068348,0,0.0939839179798536,0.193373663920732,0,0,0,0,0.730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| |||
|short_description=p5@SCHIP1 | |||
}} |
Revision as of 22:20, 21 January 2014
Short description: | p5@SCHIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SCHIP1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000483730_5end |
EntrezGene: | SCHIP1 |
HGNC: | 15678 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.31e-12 | 25 |
neuronal stem cell | 4.97e-12 | 8 |
neurectodermal cell | 3.21e-11 | 59 |
neuron | 1.70e-09 | 6 |
neuroblast | 1.70e-09 | 6 |
electrically signaling cell | 1.70e-09 | 6 |
ectodermal cell | 5.02e-08 | 72 |
embryonic stem cell | 2.15e-07 | 5 |