FFCP PHASE1:Hg19::chr4:2420335..2420354,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57732 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29334 | |||
|TSSclassifier=strong | |||
|UniProt=E9PG77 | |||
|association_with_transcript=0bp_to_ENST00000503000_5end | |||
|coexpression_cluster_id=C2519 | |||
|description=CAGE_peak_2_at_ZFYVE28_5end | |||
|id=chr4:2420335..2420354,- | |||
|ontology_enrichment_celltype=CL:0002057!1.81e-12!42;CL:0000738!6.51e-12!140;CL:0000860!2.74e-11!45;CL:0000766!1.40e-10!76;CL:0002087!2.83e-10!119;CL:0000557!2.93e-10!71;CL:0002009!5.00e-10!65;CL:0002194!1.15e-09!63;CL:0000576!1.15e-09!63;CL:0000040!1.15e-09!63;CL:0000559!1.15e-09!63;CL:0002031!1.54e-09!124;CL:0000839!2.14e-09!70;CL:0000988!7.25e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.38e-15;33!CL:0002057;1.38e-15;33!CL:0000473;1.55e-14;39!CL:0000234;1.55e-14;39!CL:0000791;2.84e-08;18!CL:0000789;2.84e-08;18!CL:0002419;2.84e-08;18!CL:0000576;7.15e-08;48!CL:0000766;3.75e-07;69!CL:0000084;9.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.62e-17,48;CL:0000234,5.62e-17,48;CL:0000738,8.45e-16,136;CL:0000860,1.81e-15,42;CL:0002057,1.81e-15,42;CL:0000766,4.46e-15,72;CL:0002087,2.82e-14,115;CL:0000557,6.90e-14,67;CL:0000839,1.86e-13,66;CL:0002031,1.89e-13,120;CL:0002194,2.72e-13,59;CL:0000576,2.72e-13,59;CL:0000040,2.72e-13,59;CL:0000559,2.72e-13,59;CL:0002009,2.75e-13,61;CL:0000988,1.10e-10,177;CL:0000037,3.93e-10,168;CL:0002032,8.70e-09,161;CL:0000837,8.70e-09,161;CL:0000791,3.33e-08,18;CL:0000789,3.33e-08,18;CL:0002420,3.33e-08,18;CL:0002419,3.33e-08,18;CL:0000790,3.33e-08,18;CL:0000763,2.39e-07,108;CL:0000049,2.39e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;6.05e-12;42!CL:0000790;2.84e-08;18!UBERON:0006601;7.03e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.57e-20!57;UBERON:0005068!3.57e-20!57;UBERON:0006241!3.57e-20!57;UBERON:0007135!3.57e-20!57;UBERON:0007023!1.18e-19!115;UBERON:0002616!1.39e-16!59;UBERON:0000955!2.17e-15!69;UBERON:0006238!2.17e-15!69;UBERON:0003080!3.94e-15!42;UBERON:0003075!5.08e-15!86;UBERON:0007284!5.08e-15!86;UBERON:0002780!6.55e-15!41;UBERON:0001890!6.55e-15!41;UBERON:0006240!6.55e-15!41;UBERON:0002346!3.75e-14!90;UBERON:0001017!4.23e-13!82;UBERON:0000073!4.32e-13!94;UBERON:0001016!4.32e-13!94;UBERON:0005743!5.48e-13!86;UBERON:0002020!1.60e-12!34;UBERON:0003528!1.60e-12!34;UBERON:0001893!3.01e-12!34;UBERON:0002390!3.04e-12!102;UBERON:0003061!3.04e-12!102;UBERON:0002193!5.87e-12!112;UBERON:0002791!9.23e-12!33;UBERON:0001869!1.52e-11!32;UBERON:0003056!1.12e-10!61;UBERON:0002619!3.57e-10!22;UBERON:0002371!2.30e-09!80;UBERON:0001950!2.74e-09!20;UBERON:0001474!5.07e-09!86;UBERON:0000956!3.00e-08!25;UBERON:0000203!3.00e-08!25;UBERON:0000153!4.25e-08!129;UBERON:0007811!4.25e-08!129;UBERON:0000025!5.98e-08!194;UBERON:0000033!2.36e-07!123;UBERON:0004765!2.60e-07!101;UBERON:0001434!2.60e-07!101;UBERON:0002405!9.14e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.80e-14;34!UBERON:0003528;1.83e-14;34!UBERON:0002020;1.83e-14;34!UBERON:0000073;2.65e-14;53!UBERON:0002616;2.65e-14;53!UBERON:0002780;5.14e-14;41!UBERON:0001890;5.14e-14;41!UBERON:0001869;9.74e-14;32!UBERON:0002791;1.10e-13;32!UBERON:0002619;3.52e-13;22!UBERON:0001950;6.45e-12;20!UBERON:0000956;8.41e-11;25!UBERON:0000203;8.41e-11;25!UBERON:0000955;5.18e-10;68!UBERON:0001017;8.43e-10;75!UBERON:0001016;1.11e-08;83!UBERON:0000125;3.40e-08;9!UBERON:0002308;3.40e-08;9!UBERON:0002420;5.58e-08;9!UBERON:0007245;5.58e-08;9!UBERON:0010009;5.58e-08;9!UBERON:0010011;5.58e-08;9!UBERON:0000454;5.58e-08;9!UBERON:0007023;1.71e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.12e-26,56;UBERON:0005068,1.12e-26,56;UBERON:0006241,1.12e-26,56;UBERON:0007135,1.12e-26,56;UBERON:0000073,1.46e-24,53;UBERON:0002616,1.46e-24,53;UBERON:0007023,6.11e-21,114;UBERON:0000955,2.68e-20,68;UBERON:0006238,2.68e-20,68;UBERON:0003075,2.74e-20,82;UBERON:0007284,2.74e-20,82;UBERON:0002780,6.56e-20,41;UBERON:0001890,6.56e-20,41;UBERON:0003080,6.56e-20,41;UBERON:0006240,6.56e-20,41;UBERON:0001017,7.18e-19,81;UBERON:0002346,1.98e-18,86;UBERON:0001016,3.03e-18,89;UBERON:0003528,2.74e-17,34;UBERON:0002020,2.74e-17,34;UBERON:0001893,6.92e-17,34;UBERON:0001869,7.71e-16,32;UBERON:0002791,8.15e-16,32;UBERON:0002390,3.38e-15,98;UBERON:0003061,3.38e-15,98;UBERON:0002193,1.89e-14,108;UBERON:0003056,2.03e-14,61;UBERON:0002619,2.23e-13,22;UBERON:0001950,4.56e-12,20;UBERON:0010371,4.70e-12,104;UBERON:0002371,1.09e-11,76;UBERON:0000956,5.71e-11,25;UBERON:0000203,5.71e-11,25;UBERON:0002405,1.26e-10,93;UBERON:0001474,2.54e-10,82;UBERON:0010314,4.53e-10,132;UBERON:0000025,2.27e-08,192;UBERON:0000125,2.99e-08,9;UBERON:0002308,2.99e-08,9;UBERON:0004765,3.15e-08,90;UBERON:0002420,4.14e-08,9;UBERON:0007245,4.14e-08,9;UBERON:0010009,4.14e-08,9;UBERON:0010011,4.14e-08,9;UBERON:0000454,4.14e-08,9;UBERON:0003076,6.22e-08,15;UBERON:0003057,6.22e-08,15;UBERON:0003081,2.19e-07,203;UBERON:0001434,9.83e-07,100 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.994192127183747,0,0,0,0,0.369363174230364,0.816002764977012,0,0,0.136874425072884,0.251085279189606,0.305653622991805,0.0821005894499457,0.472264687882075,7.08055698328027,23.7974226820272,5.57338043937874,0,0,0.369754010166788,0,0.284338464974843,0.293600439334847,14.4038806218288,13.4364779804995,10.4165217943609,0.671746422719773,0.971680998056939,0.515151135268373,1.01778767145695,1.88937971844405,0.970336244751265,4.41615170120801,6.57868620834921,3.40677007984614,5.75384784644301,10.7587496742222,6.85798466676897,2.75796544589295,7.74581620300591,6.77132432971709,2.07066573496865,5.45812300115692,1.79778787556068,2.14258724659632,6.41858054152187,1.27867425159808,5.93732340336089,13.7629923758926,6.39337125799041,3.48251086354301,5.6738522469114,1.86846674698672,12.3111845975804,7.82224377630302,6.29847649644838,1.81619850790011,2.57794345191295,1.89877432464531,0.422510572623884,0,0.209658645508376,1.34794357375794,0.600707571366025,0.64290234678832,0.570025487482497,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,14.0127140745384,0.526768169550154,7.47497126432566,12.1833336452241,12.7472929379696,1.83905144929746,1.30368906653436,2.36723902867367,1.94826728407911,4.56782873229212,5.30290633454707,6.64601683750863,6.49929273036037,8.83830106107159,7.1532641157933,0.657751618414705,0.829050053357545,0,0.889719378972363,0.267540828089713,2.09071047609954,4.64568305060021,8.43085085924227,4.46715679127419,4.04831507231205,0.95569624297229,2.60433381542567,0,2.40920190524436,2.04778577847069,0,2.60454977248419,0.821127996921047,34.676359834654,47.3369146536808,19.1168213125295,0,0,0.12786256184353,1.44575660953827,0.50133791063589,1.88300474649071,0.795285947051099,3.40644409211845,0,0,0.175669571386252,2.16115474571226,0,0,1.29818957461873,2.61194605948901,1.46253756570752,0.476981248610684,1.14398982156026,2.22874500797739,1.39133685156694,0.860234595106124,2.08284300964557,3.39184765154406,0.838998872419812,0.825354125820202,0.626984899610432,2.06733407335463,2.84613010149368,1.00416183829401,0,0.760272105718513,0.488124115096339,3.30896772311282,0,0.535798369704479,2.69435247151404,0.900891843866578,1.53316637465883,1.89853131913626,0.549605231791222,0,3.87780264148325,0.436094052142534,0,0.886413581652058,1.58891016975863,1.14734648299525,0.709336764396714,0.560677600142307,0,0,1.24484414159907,1.34710672069688,1.30769522490767,0.302714855289863,0,0,0,0,0.149448680551801,0.939475989150119,0.485618833104395,1.12360645361799,0.204154171254893,1.84251475967652,0.619954687054593,0,0,0.910161361938026,0,0.841680569770331,0.500474079487857,0.831192346452549,0.877955241761676,0.30648779579902,0,0.907457465280168,1.07633781413317,0,0.211931901159562,1.80054657650641,0.515262646192195,0.772921620136887,0.18611685633159,0.168776332241266,0.0974370051611986,1.26216887122057,0.184099797284599,0,0.710019185033229,0.302256294682921,0.339121184620975,0,0,0,0.121973706129595,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0.464367928031979,0.721879481669586,0.118306800039844,0,0.241011029883482,0.110293972732394,0.217879444092406,0,0.269662616320329,0.196221465125346,0,2.95262181849859,0,0,0,0,0.982827216677626,0,0,0.245976877086227,1.02940686179115,0.219500570817251,0,0,0,0.325808305310325,1.03993478527958,1.44331342025273,0.115930404975077,0.352226082707465,0.288732895522148,0.462985512576611,0.190254152234598,0,0.858486162094873,2.95460407304877,2.34004265139238,1.78357394746474,0,0,0,0,0,0,0,0.616339038092582,10.9883901236609,4.90007841617669,6.43836410474538,0.571481048629521,1.14596527667483,0,0,0.822619941626588,0,0.285826432630578,0,0,0.07333828582095,0.129271715757778,0,0,0,0,0.514414748524284,0,0.799266537048298,0.285955987316295,0.542621605391443,0,0,0.710783897485092,0.791951872933429,1.20575750823834,0,1.19967589418468,3.64871341923571,1.00451418286425,0,0.239624855491583,0,1.42636905040718,0.434343920002738,1.2328579353023,0.716243852959582,9.07889666347571,34.4803830353373,31.9128810792086,26.9520376187472,0.254094624222463,0,0,0,0,0.749007023947182,0,0,0.12269149171914,0.500170521059677,0,0.207970861530807,0.178428988797162,0.315404830067869,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,1.17480694477644,0.686286847621712,8.68425709716127,4.74571241800957,20.8118737716716,0,0,0,0.248107807818777,0.61384789315225,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.348631135379878,0,0,0.276242966807689,0.114814448164607,0,0,0,0.15403067420883,0,0,0,2.27466768141793,1.36074964221213,0.215915916102139,0,0.812839312631559,0.501689773854853,0.254876273045038,0,0,0,0,0.256450125116389,0.328014645699706,0.325378394664303,0.309123034943167,0.366277859273374,0.247528499761764,0,0,0,0.580024309752732,0.154048617114644,0,0.413509717453592,0.322260734604821,0.145016693914229,0.596586391912706,0.08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| |||
|short_description=p2@ZFYVE28 | |||
}} |
Revision as of 23:53, 21 January 2014
Short description: | p2@ZFYVE28 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ZFYVE28_5end |
Coexpression cluster: | C2519_cerebellum_CD8_Natural_CD4_Mast_Basophils_Peripheral |
Association with transcript: | 0bp_to_ENST00000503000_5end |
EntrezGene: | ZFYVE28 |
HGNC: | 29334 |
UniProt: | E9PG77 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.62e-17 | 48 |
phagocyte | 5.62e-17 | 48 |
leukocyte | 8.45e-16 | 136 |
classical monocyte | 1.81e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.81e-15 | 42 |
myeloid leukocyte | 4.46e-15 | 72 |
nongranular leukocyte | 2.82e-14 | 115 |
granulocyte monocyte progenitor cell | 6.90e-14 | 67 |
myeloid lineage restricted progenitor cell | 1.86e-13 | 66 |
hematopoietic lineage restricted progenitor cell | 1.89e-13 | 120 |
monopoietic cell | 2.72e-13 | 59 |
monocyte | 2.72e-13 | 59 |
monoblast | 2.72e-13 | 59 |
promonocyte | 2.72e-13 | 59 |
macrophage dendritic cell progenitor | 2.75e-13 | 61 |
hematopoietic cell | 1.10e-10 | 177 |
hematopoietic stem cell | 3.93e-10 | 168 |
hematopoietic oligopotent progenitor cell | 8.70e-09 | 161 |
hematopoietic multipotent progenitor cell | 8.70e-09 | 161 |
mature alpha-beta T cell | 3.33e-08 | 18 |
alpha-beta T cell | 3.33e-08 | 18 |
immature T cell | 3.33e-08 | 18 |
mature T cell | 3.33e-08 | 18 |
immature alpha-beta T cell | 3.33e-08 | 18 |
myeloid cell | 2.39e-07 | 108 |
common myeloid progenitor | 2.39e-07 | 108 |