FFCP PHASE1:Hg19::chrX:83757450..83757485,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=139324 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=26411 | |||
|TSSclassifier=strong | |||
|UniProt=Q7Z353 | |||
|association_with_transcript=0bp_to_ENST00000297977,ENST00000373177,ENST00000465509,uc004eek.1,uc004eel.1,uc011mqv.1_5end | |||
|description=CAGE_peak_1_at_HDX_5end | |||
|id=chrX:83757450..83757485,- | |||
|ontology_enrichment_celltype=CL:0002057!6.17e-18!42;CL:0000860!1.48e-14!45;CL:0000557!1.43e-09!71;CL:0000839!3.04e-08!70;CL:0002009!5.62e-08!65;CL:0002194!1.34e-07!63;CL:0000576!1.34e-07!63;CL:0000040!1.34e-07!63;CL:0000559!1.34e-07!63 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.19e-16;33!CL:0002057;6.19e-16;33!CL:0000473;3.51e-11;39!CL:0000234;3.51e-11;39!CL:0000576;1.51e-09;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.03e-18,42;CL:0002057,4.03e-18,42;CL:0000473,2.19e-15,48;CL:0000234,2.19e-15,48;CL:0000557,1.18e-11,67;CL:0000839,3.02e-10,66;CL:0002009,6.56e-10,61;CL:0002194,1.67e-09,59;CL:0000576,1.67e-09,59;CL:0000040,1.67e-09,59;CL:0000559,1.67e-09,59;CL:0000766,3.06e-08,72 | |||
|ontology_enrichment_development_v019=CL:0002057;4.68e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!4.00e-20!94;UBERON:0001016!4.00e-20!94;UBERON:0001017!7.70e-20!82;UBERON:0005743!1.24e-19!86;UBERON:0000468!5.89e-17!659;UBERON:0000955!1.59e-16!69;UBERON:0006238!1.59e-16!69;UBERON:0000467!1.92e-16!625;UBERON:0000480!2.76e-16!626;UBERON:0001049!4.69e-16!57;UBERON:0005068!4.69e-16!57;UBERON:0006241!4.69e-16!57;UBERON:0007135!4.69e-16!57;UBERON:0002616!6.60e-16!59;UBERON:0000922!2.57e-15!612;UBERON:0003075!1.22e-14!86;UBERON:0007284!1.22e-14!86;UBERON:0002050!1.65e-14!605;UBERON:0005423!1.65e-14!605;UBERON:0003080!2.35e-14!42;UBERON:0000923!2.90e-14!604;UBERON:0005291!2.90e-14!604;UBERON:0006598!2.90e-14!604;UBERON:0002532!2.90e-14!604;UBERON:0002346!3.08e-14!90;UBERON:0002780!4.47e-14!41;UBERON:0001890!4.47e-14!41;UBERON:0006240!4.47e-14!41;UBERON:0004121!2.52e-13!169;UBERON:0000924!3.36e-13!173;UBERON:0006601!3.36e-13!173;UBERON:0000033!1.46e-12!123;UBERON:0003056!4.36e-12!61;UBERON:0000062!1.11e-11!511;UBERON:0002020!1.20e-11!34;UBERON:0003528!1.20e-11!34;UBERON:0000153!2.08e-11!129;UBERON:0007811!2.08e-11!129;UBERON:0004765!4.85e-11!101;UBERON:0001434!4.85e-11!101;UBERON:0001893!1.04e-10!34;UBERON:0002791!1.30e-10!33;UBERON:0001869!1.88e-10!32;UBERON:0001474!4.43e-10!86;UBERON:0007023!9.93e-10!115;UBERON:0002371!2.98e-09!80;UBERON:0000956!2.97e-08!25;UBERON:0000203!2.97e-08!25;UBERON:0002204!3.38e-08!167;UBERON:0002619!1.04e-07!22;UBERON:0001950!4.52e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.95e-10;41!UBERON:0001890;2.95e-10;41!UBERON:0003528;4.31e-10;34!UBERON:0002020;4.31e-10;34!UBERON:0002791;6.46e-10;32!UBERON:0001869;1.23e-09;32!UBERON:0000073;2.34e-09;53!UBERON:0002616;2.34e-09;53!UBERON:0001893;2.85e-09;34!UBERON:0001017;3.66e-08;75!UBERON:0000956;4.04e-08;25!UBERON:0000203;4.04e-08;25!UBERON:0002619;1.42e-07;22!UBERON:0001016;2.50e-07;83!UBERON:0000955;3.18e-07;68!UBERON:0001950;6.63e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.50e-20,89;UBERON:0001017,8.22e-20,81;UBERON:0000955,1.82e-16,68;UBERON:0006238,1.82e-16,68;UBERON:0001049,6.43e-16,56;UBERON:0005068,6.43e-16,56;UBERON:0006241,6.43e-16,56;UBERON:0007135,6.43e-16,56;UBERON:0000073,2.47e-15,53;UBERON:0002616,2.47e-15,53;UBERON:0003075,8.72e-15,82;UBERON:0007284,8.72e-15,82;UBERON:0000922,1.41e-14,592;UBERON:0002346,2.04e-14,86;UBERON:0002780,3.23e-14,41;UBERON:0001890,3.23e-14,41;UBERON:0003080,3.23e-14,41;UBERON:0006240,3.23e-14,41;UBERON:0004121,2.78e-13,171;UBERON:0000924,2.78e-13,171;UBERON:0006601,2.78e-13,171;UBERON:0005423,3.06e-13,581;UBERON:0001434,5.56e-13,100;UBERON:0002050,6.35e-13,564;UBERON:0010371,8.68e-13,104;UBERON:0004765,2.36e-12,90;UBERON:0000923,2.45e-12,560;UBERON:0010316,2.45e-12,560;UBERON:0005291,2.45e-12,560;UBERON:0006598,2.45e-12,560;UBERON:0010317,2.45e-12,560;UBERON:0002532,2.45e-12,560;UBERON:0003056,3.78e-12,61;UBERON:0001474,6.57e-12,82;UBERON:0003528,9.25e-12,34;UBERON:0002020,9.25e-12,34;UBERON:0010314,1.82e-11,132;UBERON:0002371,3.84e-11,76;UBERON:0002791,7.27e-11,32;UBERON:0001893,8.19e-11,34;UBERON:0001869,1.49e-10,32;UBERON:0002204,4.03e-09,167;UBERON:0007023,6.14e-09,114;UBERON:0000956,2.49e-08,25;UBERON:0000203,2.49e-08,25;UBERON:0002619,8.84e-08,22;UBERON:0002405,1.30e-07,93;UBERON:0001950,3.91e-07,20;UBERON:0002390,6.53e-07,98;UBERON:0003061,6.53e-07,98 | |||
|phase1_expression=4.90531624030503,1.92690471501885,3.38290569830331,2.00146596706261,0.893922188854576,1.74467704820074,2.53299878168311,0.631719873426831,1.82829939739887,0.491467873003018,0.697801167972428,0.655324116390517,0.791300934685361,6.43585035392242,2.65117900582333,3.36162573225888,5.42425075221579,5.11217063271161,1.46379839637152,2.83178433576612,0.408001382488506,0,6.86966369114536,6.29622355335267,4.5195350254129,0,0,0,1.18009283054671,5.37361157336098,2.01260960310899,0,0.30120591877825,0.739508020333575,0,0,1.76160263600908,6.09394949385065,4.61252229181326,5.859293509328,4.25439401055856,4.21061765824673,2.83333124397605,5.52513307362346,5.66813915533214,6.30718559088322,5.11343881192506,11.5127008646111,11.7688420940139,12.9461576544968,20.7490172288572,22.9387762991928,22.4084692478802,17.4280864567633,10.8341189275473,5.64727018627814,6.82265375144614,9.88783331558372,26.9353825286394,19.2557416245656,16.6227652707751,14.1836059080288,14.9597743216224,18.3276642729058,25.828622237944,14.7520158419696,22.4216009638407,12.0599359323237,15.1230046341858,16.723541042294,28.4537766237683,25.7794345191295,29.7474644194431,5.70389273042243,5.52771179909113,3.56419697364239,4.94245977044578,4.05477610672067,10.7686143087044,4.56020389985998,6.36533367037088,5.66258876670365,0,0,0.889509253863555,2.13365111283254,1.60158394814405,1.72425731986345,2.64417949113945,0,2.27685187643779,2.34894875748376,2.29363936875137,2.64342657158052,6.1655941927969,1.31692042387539,1.7703879310245,0.393010762749165,1.23360899399706,1.67186495390678,0.651844533267181,0,0,1.33692548262208,0.883817722424512,1.10766947291811,1.08321545506006,0.512365278902701,1.04047478047903,0.986627427622057,0.829050053357545,2.02862160014537,0.593146252648242,0,0,1.92625882585863,0.383220493601921,0.68725489096526,1.51811815211702,0.637130828648193,0,0,1.35517607169996,1.4078527226986,1.24930726552346,0.473554504088034,0.821127996921047,1.20964045934839,0.267440195783507,1.01377082717959,2.43806866313962,4.02420515822182,2.17366355134002,2.53007406669196,3.50936537445123,1.59331170856906,1.5905718941022,0.973269740605272,8.98080763058645,6.43015252641436,7.29028721252946,2.16115474571226,0,0,0.324547393654683,0.522389211897802,1.06366368415092,0.476981248610684,0.571994910780128,0,2.78267370313387,0,3.81854551768354,1.13061588384802,3.77549492588915,2.75118041940067,2.71693456497854,10.3366703667732,9.96145535522789,12.7193832850575,2.81980521976403,2.28081631715554,2.68468263302986,5.51494620518803,5.67099363517232,10.5373679375214,7.18493992403743,7.65758067286591,3.06633274931766,5.69559395740877,2.93122790288652,0,0,0,1.98788780678127,3.67228483827281,7.94455084879313,4.58938593198102,1.41867352879343,1.68203280042692,1.06748995729705,1.2333377420858,4.66816553099649,2.55950276932407,3.59616186849609,2.72443369760877,3.45705554687999,3.51482147750695,1.24864030732128,5.13424639390004,2.39117888882882,5.40198693761318,5.98929894162087,5.33713065468544,7.14539599392126,4.05353247128834,4.02970546585485,5.94001428641027,3.4617370098998,0.910161361938026,0.718618141816238,6.39677233025452,4.62938523526267,6.64953877162039,3.95079858792754,2.75839016219118,3.15499923703853,3.06266894532057,8.9694817844431,4.27114777637135,2.54318281391474,5.10154863343484,5.35873152039882,7.21393512127762,3.90845398296339,7.76371128309825,3.80004320128675,8.83518209854401,5.43094401989566,5.81925804547723,7.81021103536552,3.92933183087797,3.05209066158878,4.63826047591912,3.81844568827169,5.44928731239107,3.29329006549908,4.63854189125198,3.36962434321603,3.00617059544574,2.27088765788066,3.28479623168247,3.12899064659632,2.57296375277154,1.38134921352481,7.42988684851167,3.60939740834793,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0.8231480226628,0,1.26755034821831,9.82827216677626,5.90789906681404,0,2.45976877086227,6.51957679134397,2.41450627898976,0,2.01057944823262,2.59247646443883,1.3032332212413,2.07986957055916,5.77325368101093,6.02838105870399,7.27933904262094,3.17606185074362,0.925971025153221,5.13686211033415,0,0,3.44703808522356,1.17002132569619,1.78357394746474,1.87467667973554,6.55130299975552,5.81277898693785,2.7763142037883,2.3250715081117,0.383382679165211,42.3690384590511,4.84266387072743,11.4030463547425,13.4031556677774,13.0029706429171,2.6669115602711,1.14596527667483,0,1.71072446022705,2.26220483947312,3.90445975197093,3.71574362419752,2.46688385559794,1.30788020649984,4.91366515000365,5.04159691455333,0,2.535908257668,4.5209479819428,1.04007436911366,1.54324424557285,1.41849132023278,2.66422179016099,4.00338382242813,0.542621605391443,1.64648067356154,3.25736184293735,3.55391948742546,3.16780749173372,3.91871190177462,2.61460037580088,3.79897366491817,2.43247561282381,2.00902836572851,4.21667878966063,4.79249710983165,3.44585807502342,9.98458335285029,5.50168965336801,4.52047909610843,6.62525563987614,0,4.53170748464433,1.50939302401662,4.62034930607094,7.36874410245144,22.1237751557957,13.1459098172208,8.37581326671744,7.65526501983796,0,0,0.414415513436035,5.27573414392302,4.00136416847742,3.7977103317963,3.53550464602372,3.03329280955175,2.99634588564476,4.09994952474496,2.70851489754947,0,3.10419213877515,5.97803038681893,1.10621501125022,4.51794795234031,0.783204629850962,1.02943027143257,4.34212854858063,2.37285620900479,2.77491650288955,0,0,0.604780586659361,2.48107807818777,4.75732117192994,3.64858122762996,1.66580894032411,2.04682899626681,2.2519548960105,1.48418066444991,2.62156479464514,2.66342587969691,5.33826514089759,5.19254429183621,2.78904908303902,1.32945394550784,4.41114234667227,2.3941057123333,5.39627906373652,2.91345868810747,4.45823010862042,1.80479845162965,8.00959505885914,2.35304930753057,1.46139224653261,7.59971728028705,0,1.87103075804167,2.37507507712353,0,1.62567862526312,0.501689773854853,1.27438136522519,1.66215201785745,0.223874754722178,0,0,6.66770325302612,1.96808787419823,4.55529752530024,4.73988653579522,7.6002655799225,11.2212919892,2.29706215198469,1.95018073810956,1.6068392984416,4.15684088656124,6.62409053592971,3.99109554287937,5.23778975441216,6.87489567156951,3.48040065394148,3.40906509664404,5.2528901031575,3.63626813794152,4.03599141466723,10.7194678495451,2.32662895967765,2.32422774648643,4.7221852024596,0.6970372701606,3.08033580176089,1.59691809095107,1.73986598415015,1.66791797193528,1.71749864090389,7.81532575655301,10.1241415909992,4.5751246541718,0,1.71175595213568,1.59101623962968,0.78494864019923,6.83515338816596,6.03981465419321,5.65499531259295,1.01091240786658,0,0.421258456238981,0.975267478179181,8.28625864746367,1.05650146756755,4.36799716505554,3.11091950298168,3.39024349860728,0,0.66343897524122,2.19225442626881,0,5.24715801637306,2.23201414658974,1.8589409885985,1.12678241012897,5.59304273595801,3.34046739444612,1.78335525740625,6.74046021734136,2.9555068941673,3.62224382255892,1.89736586882858,1.39973888097993,1.15466535270614,0,0,6.40177845282098,0,3.36942951335251,0.886860307073351,3.90529780351831,2.53723804616085,0.764637207142375,0.569647187174163,0.476463550915578,1.23408681925858,2.59389324477087,1.08006287447623,0,0.854592569019785,4.81239927631679,0,0,0,0,0,0,1.53204296105893,0,0,0,0,0,0,0,0,0.201799707191048,1.27753871307098,0,0,0,0,0,0.278406173895242,0,0,0,0,0,6.73937624650712,1.8204078262427,0.334330152832435,0,0.47748896947538,0.296964680832639,0.307160702099232,8.94732882989668,10.4095368143779,4.78627431598495,0,8.86726714137573,4.18420775327246,2.48655523978033,0,8.79510669518531,3.56945935837101,2.48831670129446,2.78591888556713,3.22238114416096,0,6.60910817767455,4.7896618469388,16.6705485216955,2.90799823828566,6.30823067500589,1.99613798001194,0,3.32347999985544,6.52499617891314,0.1137934482855,3.30529745380596,0,5.17115059862197,5.24888304089858,0,12.4003794013937,7.5975756334007,24.4130778107333,27.8659735026686,8.57088094965288,5.04586413454137,0,0,11.1577874830506,3.41826167541004,0.46112780877612,0,0.217294743844016,0.638002319463839,3.29751336246704,1.06606955203727,0,0.156980256395025,2.49317522850235,0,0,0,0,0.635746315921515,6.54094000036884,1.95879369790977,2.26164914294305,3.46221823587346,1.99052386215701,3.44984501563023,2.4441205797345,16.0121409487536,6.67245270311115,7.41395841488733,3.63966118095656,3.21031058919516,5.62234669740814,2.73682183823499,5.08728009223433,7.28341138602278,3.94584402849391,3.62972148145992,13.1611287501111,6.38184454247728,4.35937916302028,1.65901106235595,7.31119259977904,2.31694369112849,5.33685961292283,4.77889719091835,7.9690672888342,0,0,0,0,6.63961339319714,3.43972064943233,0,0,0,5.14041787388623,9.26689330260753,5.87549926029384,3.70013196546227,0.794858446811959,9.4966193933818,0,1.28254112402454,4.0556069000477,1.79828648623917,0,0,0,0,7.33089959836052,1.88555227693436,6.7952103036807,7.32219924186332,3.97793048781655,13.0027765455684,7.80546375322726,7.25598508127563,2.55493176133945,7.30601250413927,1.57732412567589,8.65775443943988,5.27068975226872,10.0502223440754,0.599037001496973,0.429226048136571,2.4548860318606,4.29974223915048,2.16179930125442,1.16495949527454,0,0,0,2.65754200089822,2.62487329403932,6.36183751847443,8.44461117891769,4.50108815702054,5.63911690048659,3.32352270423348,6.29926896344201,5.41661368190565,3.9487211827716,0.335434687599266,4.72834243795189,2.98991152369489,6.33602019116439,4.84075816198681,0,2.85878130549347,0.662091970365432,4.5768336777855,2.71499800876856,5.18532894720761,1.63293680054705,10.7757172406239,9.93319501067001,4.94125263177723,5.66560457600628,4.25001477666439,0,9.30837285803164,10.0496777324444,0.855434189421647,2.81926008926669,7.79548111744171,22.4802156292522,4.14239055347196,0.496166021811951,1.38328142328561,0,5.10673006216145,6.52821364043369,12.534494701135,12.5601686473019,12.1312873362628,0.157054096250234,7.08854543973589,11.1043901060786,11.1419928328785,4.0138643698305,9.761756535243,4.28465180295546,8.30091809617385,3.99937305478741,5.15606999641603,2.85465333544967,3.76425311517075,9.36669811613763,4.34763085832475,4.0298796779456,7.47882591511118,4.43844689202091,4.54567212660214,5.0313580350515,5.33886732957922,5.26332157312924,2.26846385644859,5.28486481981454,6.35777144955426,5.73468361789329,4.49803112163605,6.52104418880289,3.31764966272684,5.3168342911599,8.86966605079948,5.55953153289708,7.23529903120711,10.1717683301165,6.7284003904947,6.65945453663428,5.56840511854192,6.36953421917786,4.00027764663154,3.77735275701072,1.6837474438296,15.1421877874381,0.770479321629213,5.78992296712299,4.4369029634086,3.85400073370863,2.54674721756217,8.3210479532199,4.47722102703719,0.617602894321944,2.85069264452319,3.7104720648635,2.70079653579281,3.37884881306145,4.09986429740715,2.07258205038719,4.25403938648335,10.5076411475315,3.89720617678777,4.65026941096771,6.70618116448961,2.6208787907713,0.737318726261158,0,2.19986135440423,0,3.2720846135555,5.67515953566836,0.184105950251841,2.09819261579167,3.11038630016486,18.6725782103331,10.2433570826848,5.34704202310048,13.1051565830417,0,8.92814664427068,2.72658681369805,0,1.59002175326709,0,7.20513673456923,2.82140754952547,3.9811912055916,5.33102568300614,15.5866233958143,11.9725394292863,5.33302547025963,11.595298026199,2.28218933131919,8.39673357285626,4.28308260777463,0,1.76954585021611,0,0,4.95796724107317,9.66503896484141,0.596748666348824,9.62692202870493,2.42046082444224,0.781514011233092,0,5.73201711285339,14.9334647079216,5.13285643099799,10.9350933805939,14.6747625515841,4.94643319512473,12.580420607419,0,10.9166459245645,4.57265235335014,0,11.7854403893223,15.1327674998471,18.8159337313356,18.6682996908064,0.79832133146375,0,0.171488009437418,7.40870089447466,2.82822926320251,2.83665218121524,5.56157009460346,6.12246124234009,9.42693539496011,0.280272163313789,5.47895232305697,4.75040700680967,6.21077194253165,3.21644448794954,0,3.60348418641188,9.73606324894445,5.61197955311177,3.52267479077163,2.90221411059715,4.83881763269864,0.860454717640555,3.54996002191696,5.0275908807903,6.35080575286394,8.93516787321795,0,0,0,0,3.04794812455674,2.58971534875158,2.15591894398119,11.598144313382,8.25708688200537,4.44484980578001,0,5.58924426654572,4.29195111748048,3.62803705259916,12.6808788596006,1.77500563648273,1.31135736302374,2.35158648180761,6.86415300910935,3.29947165942276,10.600657224207,9.80253121079384,2.5359343655004,1.69927114687817,3.38342104727473,1.99819452718089,0,0,0,0.0802413666891683,3.65168194123259,2.75237570042724,8.74371457223853,4.1020606170228,2.92363407820933,10.9087672585094,4.7612415646386,1.48798007266701,1.38652688589425,1.29787968637137,3.78499274505237,8.30418346924086,3.04076402427449,2.54972074354954,0.534434810531121,6.52453786697399,3.50990555009325,5.30450887527676,2.41167717140561,11.6083721524229,9.72270161101815,4.4779136199206,7.61806180683969,1.0334225573761,0.931120714437869,1.56984607612859,5.09177266225319,5.86139847978836,3.26575121845442,2.39563310759697,1.14498490124799,4.66194335052396,3.99192427855216,9.19856935304012,0,9.653614114347,4.04213409479641,2.34640942403454,5.50086498822899,5.69654649642034,13.9808922578958,3.8242020782295,2.24397944612263 | |||
|short_description=p1@HDX | |||
}} |
Revision as of 06:13, 23 January 2014
Short description: | p1@HDX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HDX_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000297977, ENST00000373177, ENST00000465509, uc004eek.1, uc004eel.1, uc011mqv.1_5end |
EntrezGene: | HDX |
HGNC: | 26411 |
UniProt: | Q7Z353 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.03e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.03e-18 | 42 |
defensive cell | 2.19e-15 | 48 |
phagocyte | 2.19e-15 | 48 |
granulocyte monocyte progenitor cell | 1.18e-11 | 67 |
myeloid lineage restricted progenitor cell | 3.02e-10 | 66 |
macrophage dendritic cell progenitor | 6.56e-10 | 61 |
monopoietic cell | 1.67e-09 | 59 |
monocyte | 1.67e-09 | 59 |
monoblast | 1.67e-09 | 59 |
promonocyte | 1.67e-09 | 59 |
myeloid leukocyte | 3.06e-08 | 72 |