FFCP PHASE1:Hg19::chr10:103599591..103599635,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=30819|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=15522|TSSclassifier=S|UniProt=Q3YAC6,Q9NS61|association_with_transcript=0bp_to_ENST00000348850,NM_173194,uc001ktz.2,uc010qqh.1_5end|coexpression_cluster_id=C271|description=CAGE_peak_3_at_KCNIP2_5end|id=chr10:103599591..103599635,-|ontology_enrichment_celltype=CL:0000047!4.80e-10!8;CL:0000540!8.86e-08!6;CL:0000031!8.86e-08!6;CL:0000404!8.86e-08!6|ontology_enrichment_celltype_v019=CL:0002322;5.44e-10;5!CL:0000540;6.10e-09;6!CL:0000404;6.10e-09;6|ontology_enrichment_celltype_v019_2=CL:0000047,7.74e-13,8;CL:0002322,6.10e-10,5;CL:0000540,5.15e-09,6;CL:0000031,5.15e-09,6;CL:0000404,5.15e-09,6|ontology_enrichment_development_v019=UBERON:0006601;1.35e-17;82!CL:0000031;6.10e-09;6!UBERON:0006215;6.92e-09;3!UBERON:0006241;5.01e-08;3!UBERON:0003057;5.01e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.58e-62!82;UBERON:0005743!9.80e-60!86;UBERON:0001049!9.89e-58!57;UBERON:0005068!9.89e-58!57;UBERON:0006241!9.89e-58!57;UBERON:0007135!9.89e-58!57;UBERON:0000073!6.26e-57!94;UBERON:0001016!6.26e-57!94;UBERON:0002616!1.03e-47!59;UBERON:0000955!2.70e-47!69;UBERON:0006238!2.70e-47!69;UBERON:0002780!1.81e-45!41;UBERON:0001890!1.81e-45!41;UBERON:0006240!1.81e-45!41;UBERON:0003080!4.87e-44!42;UBERON:0002346!6.43e-39!90;UBERON:0003075!2.19e-37!86;UBERON:0007284!2.19e-37!86;UBERON:0002020!5.91e-37!34;UBERON:0003528!5.91e-37!34;UBERON:0001893!6.85e-37!34;UBERON:0002791!9.76e-36!33;UBERON:0001869!9.95e-35!32;UBERON:0007023!1.99e-32!115;UBERON:0000924!2.17e-30!173;UBERON:0006601!2.17e-30!173;UBERON:0004121!6.70e-29!169;UBERON:0002619!9.99e-29!22;UBERON:0003056!3.00e-27!61;UBERON:0000956!1.96e-26!25;UBERON:0000203!1.96e-26!25;UBERON:0001950!3.59e-26!20;UBERON:0000033!1.17e-24!123;UBERON:0000153!1.78e-23!129;UBERON:0007811!1.78e-23!129;UBERON:0003076!2.69e-14!15;UBERON:0003057!2.69e-14!15;UBERON:0000025!1.47e-13!194;UBERON:0002420!4.58e-12!9;UBERON:0007245!4.58e-12!9;UBERON:0010009!4.58e-12!9;UBERON:0010011!4.58e-12!9;UBERON:0000454!4.58e-12!9;UBERON:0002308!6.58e-12!9;UBERON:0000125!6.58e-12!9;UBERON:0001871!3.99e-11!7;UBERON:0004733!9.15e-11!12;UBERON:0002028!9.15e-11!12;UBERON:0007277!9.15e-11!12;UBERON:0004111!1.22e-10!241;UBERON:0001894!7.09e-10!7;UBERON:0006222!7.09e-10!7;UBERON:0004732!1.05e-09!13;UBERON:0009663!1.31e-09!7;UBERON:0000200!1.11e-08!6;UBERON:0002298!2.78e-08!8;UBERON:0000349!7.46e-08!5;UBERON:0000483!9.23e-08!309;UBERON:0000477!1.35e-07!286;UBERON:0000119!1.71e-07!312;UBERON:0002680!2.11e-07!9;UBERON:0001895!2.11e-07!9;UBERON:0010092!2.11e-07!9;UBERON:0002021!2.71e-07!5;UBERON:0001872!2.79e-07!5|ontology_enrichment_uberon_v019=UBERON:0002780;4.93e-54;41!UBERON:0001890;4.93e-54;41!UBERON:0003528;3.03e-51;34!UBERON:0002020;3.03e-51;34!UBERON:0001893;4.38e-51;34!UBERON:0001869;6.45e-51;32!UBERON:0002791;1.07e-50;32!UBERON:0000073;2.85e-50;53!UBERON:0002616;2.85e-50;53!UBERON:0002619;6.42e-49;22!UBERON:0001950;1.92e-44;20!UBERON:0000956;1.88e-42;25!UBERON:0000203;1.88e-42;25!UBERON:0001017;1.31e-37;75!UBERON:0000955;7.94e-36;68!UBERON:0001016;4.52e-31;83!UBERON:0002420;1.28e-19;9!UBERON:0007245;1.28e-19;9!UBERON:0010009;1.28e-19;9!UBERON:0010011;1.28e-19;9!UBERON:0000454;1.28e-19;9!UBERON:0000125;2.14e-19;9!UBERON:0002308;2.14e-19;9!UBERON:0001871;3.21e-16;6!UBERON:0001894;4.69e-16;7!UBERON:0004733;2.16e-15;12!UBERON:0002028;2.16e-15;12!UBERON:0009663;2.19e-15;7!UBERON:0002298;4.67e-14;6!UBERON:0004732;4.75e-14;13!UBERON:0000200;5.49e-14;6!UBERON:0000349;1.83e-12;5!UBERON:0007023;2.76e-12;114!UBERON:0011216;9.66e-12;132!UBERON:0001872;1.40e-11;5!UBERON:0002021;1.87e-11;5!UBERON:0002784;1.42e-10;4!UBERON:0000369;2.67e-10;4!UBERON:0002435;2.67e-10;4!UBERON:0000204;2.67e-10;4!UBERON:0003296;5.26e-10;4!UBERON:0010133;5.26e-10;4!UBERON:0002680;9.06e-10;9!UBERON:0001895;9.06e-10;9!UBERON:0005383;3.77e-08;3!UBERON:0005382;3.77e-08;3!UBERON:0002240;5.01e-08;3!UBERON:0005174;5.01e-08;3!UBERON:0001137;5.01e-08;3!UBERON:0000988;6.19e-08;3!UBERON:0001870;7.91e-08;3!UBERON:0001896;8.57e-08;3!UBERON:0005290;8.57e-08;3!UBERON:0010314;6.63e-07;132|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.58e-100,81;UBERON:0001049,4.83e-97,56;UBERON:0005068,4.83e-97,56;UBERON:0006241,4.83e-97,56;UBERON:0007135,4.83e-97,56;UBERON:0000073,2.96e-90,53;UBERON:0002616,2.96e-90,53;UBERON:0001016,1.70e-88,89;UBERON:0000955,4.61e-80,68;UBERON:0006238,4.61e-80,68;UBERON:0002780,1.11e-75,41;UBERON:0001890,1.11e-75,41;UBERON:0003080,1.11e-75,41;UBERON:0006240,1.11e-75,41;UBERON:0003075,6.38e-62,82;UBERON:0007284,6.38e-62,82;UBERON:0003528,8.09e-61,34;UBERON:0002020,8.09e-61,34;UBERON:0001893,1.04e-60,34;UBERON:0002346,2.19e-58,86;UBERON:0001869,6.26e-57,32;UBERON:0002791,1.12e-56,32;UBERON:0002619,5.90e-49,22;UBERON:0010371,9.20e-48,104;UBERON:0003056,2.06e-47,61;UBERON:0001950,1.76e-44,20;UBERON:0000956,1.74e-42,25;UBERON:0000203,1.74e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=30819 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15522 | |||
|TSSclassifier=S | |||
|UniProt=Q3YAC6,Q9NS61 | |||
|association_with_transcript=0bp_to_ENST00000348850,NM_173194,uc001ktz.2,uc010qqh.1_5end | |||
|coexpression_cluster_id=C271 | |||
|description=CAGE_peak_3_at_KCNIP2_5end | |||
|id=chr10:103599591..103599635,- | |||
|ontology_enrichment_celltype=CL:0000047!4.80e-10!8;CL:0000540!8.86e-08!6;CL:0000031!8.86e-08!6;CL:0000404!8.86e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002322;5.44e-10;5!CL:0000540;6.10e-09;6!CL:0000404;6.10e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.74e-13,8;CL:0002322,6.10e-10,5;CL:0000540,5.15e-09,6;CL:0000031,5.15e-09,6;CL:0000404,5.15e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.35e-17;82!CL:0000031;6.10e-09;6!UBERON:0006215;6.92e-09;3!UBERON:0006241;5.01e-08;3!UBERON:0003057;5.01e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p3@KCNIP2 | |||
}} |
Revision as of 11:23, 10 September 2013
Short description: | p3@KCNIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_KCNIP2_5end |
Coexpression cluster: | C271_pineal_spinal_locus_globus_medulla_thalamus_cerebellum |
Association with transcript: | 0bp_to_ENST00000348850, NM_173194, uc001ktz.2, uc010qqh.1_5end |
EntrezGene: | KCNIP2 |
HGNC: | 15522 |
UniProt: | Q3YAC6Q9NS61 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.74e-13 | 8 |
embryonic stem cell | 6.10e-10 | 5 |
neuron | 5.15e-09 | 6 |
neuroblast | 5.15e-09 | 6 |
electrically signaling cell | 5.15e-09 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.