FFCP PHASE1:Hg19::chr10:105452917..105452938,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9644|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=23664|TSSclassifier=S|UniProt=F8WCK5|association_with_transcript=0bp_to_ENST00000427662,uc010qqr.1,uc010qqt.1_5end|coexpression_cluster_id=C4|description=CAGE_peak_7_at_SH3PXD2A_5end|id=chr10:105452917..105452938,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002334;1.21e-07;12!CL:0000945;3.87e-07;24|ontology_enrichment_celltype_v019_2=CL:0002334,1.12e-07,12;CL:0000945,2.91e-07,24;CL:0000826,2.91e-07,24|ontology_enrichment_development_v019=UBERON:0006601;3.08e-08;82|ontology_enrichment_disease=DOID:2394!4.39e-08!14|ontology_enrichment_disease_v019=DOID:2394;5.31e-12;14|ontology_enrichment_disease_v019_2=DOID:2394,3.85e-12,14|ontology_enrichment_uberon=UBERON:0007023!2.16e-22!115;UBERON:0001049!1.54e-21!57;UBERON:0005068!1.54e-21!57;UBERON:0006241!1.54e-21!57;UBERON:0007135!1.54e-21!57;UBERON:0003075!1.33e-18!86;UBERON:0007284!1.33e-18!86;UBERON:0002616!3.68e-18!59;UBERON:0002780!1.58e-17!41;UBERON:0001890!1.58e-17!41;UBERON:0006240!1.58e-17!41;UBERON:0002346!7.29e-17!90;UBERON:0003080!1.16e-16!42;UBERON:0000955!2.08e-16!69;UBERON:0006238!2.08e-16!69;UBERON:0005743!6.98e-16!86;UBERON:0000073!5.55e-15!94;UBERON:0001016!5.55e-15!94;UBERON:0001017!1.81e-14!82;UBERON:0001893!2.00e-14!34;UBERON:0002020!2.76e-14!34;UBERON:0003528!2.76e-14!34;UBERON:0002791!9.62e-14!33;UBERON:0001869!5.14e-13!32;UBERON:0003056!1.67e-12!61;UBERON:0002619!2.83e-11!22;UBERON:0001950!5.56e-10!20;UBERON:0000025!6.93e-09!194;UBERON:0000956!9.11e-09!25;UBERON:0000203!9.11e-09!25;UBERON:0000033!2.87e-08!123;UBERON:0000153!3.72e-08!129;UBERON:0007811!3.72e-08!129;UBERON:0004121!6.59e-08!169;UBERON:0002308!1.42e-07!9;UBERON:0000125!1.42e-07!9;UBERON:0002420!1.49e-07!9;UBERON:0007245!1.49e-07!9;UBERON:0010009!1.49e-07!9;UBERON:0010011!1.49e-07!9;UBERON:0000454!1.49e-07!9;UBERON:0000924!2.75e-07!173;UBERON:0006601!2.75e-07!173;UBERON:0004111!3.15e-07!241;UBERON:0000475!3.73e-07!365|ontology_enrichment_uberon_v019=UBERON:0001893;3.10e-20;34!UBERON:0002780;2.29e-19;41!UBERON:0001890;2.29e-19;41!UBERON:0003528;2.35e-19;34!UBERON:0002020;2.35e-19;34!UBERON:0002791;7.14e-19;32!UBERON:0001869;7.20e-19;32!UBERON:0000073;8.37e-19;53!UBERON:0002616;8.37e-19;53!UBERON:0002619;2.98e-17;22!UBERON:0001950;3.12e-15;20!UBERON:0000956;2.12e-14;25!UBERON:0000203;2.12e-14;25!UBERON:0001017;3.69e-12;75!UBERON:0000955;4.78e-12;68!UBERON:0000125;7.09e-11;9!UBERON:0002308;7.09e-11;9!UBERON:0002420;7.38e-11;9!UBERON:0007245;7.38e-11;9!UBERON:0010009;7.38e-11;9!UBERON:0010011;7.38e-11;9!UBERON:0000454;7.38e-11;9!UBERON:0001016;8.72e-11;83!UBERON:0009663;7.92e-09;7!UBERON:0004732;3.67e-08;13!UBERON:0000200;4.81e-08;6!UBERON:0002298;8.99e-08;6!UBERON:0004733;4.18e-07;12!UBERON:0002028;4.18e-07;12!UBERON:0000349;8.29e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.71e-36,56;UBERON:0005068,4.71e-36,56;UBERON:0006241,4.71e-36,56;UBERON:0007135,4.71e-36,56;UBERON:0000073,4.78e-33,53;UBERON:0002616,4.78e-33,53;UBERON:0003075,6.27e-28,82;UBERON:0007284,6.27e-28,82;UBERON:0002780,3.34e-27,41;UBERON:0001890,3.34e-27,41;UBERON:0003080,3.34e-27,41;UBERON:0006240,3.34e-27,41;UBERON:0000955,7.37e-26,68;UBERON:0006238,7.37e-26,68;UBERON:0002346,1.04e-25,86;UBERON:0001017,5.20e-25,81;UBERON:0001016,7.63e-25,89;UBERON:0001893,2.18e-23,34;UBERON:0003528,3.67e-23,34;UBERON:0002020,3.67e-23,34;UBERON:0002791,3.58e-21,32;UBERON:0001869,3.78e-21,32;UBERON:0003056,8.55e-21,61;UBERON:0010371,1.95e-20,104;UBERON:0007023,2.89e-19,114;UBERON:0010314,1.44e-18,132;UBERON:0002619,3.07e-17,22;UBERON:0001950,3.19e-15,20;UBERON:0000956,2.18e-14,25;UBERON:0000203,2.18e-14,25;UBERON:0000025,9.24e-14,192;UBERON:0000125,7.12e-11,9;UBERON:0002308,7.12e-11,9;UBERON:0002420,7.62e-11,9;UBERON:0007245,7.62e-11,9;UBERON:0010009,7.62e-11,9;UBERON:0010011,7.62e-11,9;UBERON:0000454,7.62e-11,9;UBERON:0004121,9.81e-11,171;UBERON:0000924,9.81e-11,171;UBERON:0006601,9.81e-11,171;UBERON:0003076,7.30e-10,15;UBERON:0003057,7.30e-10,15;UBERON:0004111,2.66e-09,240;UBERON:0009663,7.97e-09,7;UBERON:0004732,3.73e-08,13;UBERON:0000200,5.07e-08,6;UBERON:0002298,8.87e-08,6;UBERON:0004733,4.24e-07,12;UBERON:0002028,4.24e-07,12;UBERON:0007277,4.24e-07,12;UBERON:0000349,8.26e-07,5|phase1_expression=0.908391896352783,2.35510576280081,1.69145284915165,1.0007329835313,3.5756887554183,2.61701557230111,2.53299878168311,0.631719873426831,0,0.982935746006035,0,0,0.791300934685361,0.123766352960047,0,1.34465029290355,1.80808358407193,4.38186054232424,3.41552959153355,0,0,0,0,0,0,6.1130724598361,5.41863890369642,5.11620078538915,0,0,0,5.51652734687356,1.204823675113,0.739508020333575,0,1.27952309238679,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0.320929027076094,0.639337125799041,0,0,0,0,0,0.622822248995575,0,0,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,3.51992488922645,0.546138611262131,1.77901850772711,0.426730222566507,0.800791974072025,1.14950487990897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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9644 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23664 | |||
|TSSclassifier=S | |||
|UniProt=F8WCK5 | |||
|association_with_transcript=0bp_to_ENST00000427662,uc010qqr.1,uc010qqt.1_5end | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_7_at_SH3PXD2A_5end | |||
|id=chr10:105452917..105452938,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.21e-07;12!CL:0000945;3.87e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.12e-07,12;CL:0000945,2.91e-07,24;CL:0000826,2.91e-07,24 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.08e-08;82 | |||
|ontology_enrichment_disease=DOID:2394!4.39e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.31e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.85e-12,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.16e-22!115;UBERON:0001049!1.54e-21!57;UBERON:0005068!1.54e-21!57;UBERON:0006241!1.54e-21!57;UBERON:0007135!1.54e-21!57;UBERON:0003075!1.33e-18!86;UBERON:0007284!1.33e-18!86;UBERON:0002616!3.68e-18!59;UBERON:0002780!1.58e-17!41;UBERON:0001890!1.58e-17!41;UBERON:0006240!1.58e-17!41;UBERON:0002346!7.29e-17!90;UBERON:0003080!1.16e-16!42;UBERON:0000955!2.08e-16!69;UBERON:0006238!2.08e-16!69;UBERON:0005743!6.98e-16!86;UBERON:0000073!5.55e-15!94;UBERON:0001016!5.55e-15!94;UBERON:0001017!1.81e-14!82;UBERON:0001893!2.00e-14!34;UBERON:0002020!2.76e-14!34;UBERON:0003528!2.76e-14!34;UBERON:0002791!9.62e-14!33;UBERON:0001869!5.14e-13!32;UBERON:0003056!1.67e-12!61;UBERON:0002619!2.83e-11!22;UBERON:0001950!5.56e-10!20;UBERON:0000025!6.93e-09!194;UBERON:0000956!9.11e-09!25;UBERON:0000203!9.11e-09!25;UBERON:0000033!2.87e-08!123;UBERON:0000153!3.72e-08!129;UBERON:0007811!3.72e-08!129;UBERON:0004121!6.59e-08!169;UBERON:0002308!1.42e-07!9;UBERON:0000125!1.42e-07!9;UBERON:0002420!1.49e-07!9;UBERON:0007245!1.49e-07!9;UBERON:0010009!1.49e-07!9;UBERON:0010011!1.49e-07!9;UBERON:0000454!1.49e-07!9;UBERON:0000924!2.75e-07!173;UBERON:0006601!2.75e-07!173;UBERON:0004111!3.15e-07!241;UBERON:0000475!3.73e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;3.10e-20;34!UBERON:0002780;2.29e-19;41!UBERON:0001890;2.29e-19;41!UBERON:0003528;2.35e-19;34!UBERON:0002020;2.35e-19;34!UBERON:0002791;7.14e-19;32!UBERON:0001869;7.20e-19;32!UBERON:0000073;8.37e-19;53!UBERON:0002616;8.37e-19;53!UBERON:0002619;2.98e-17;22!UBERON:0001950;3.12e-15;20!UBERON:0000956;2.12e-14;25!UBERON:0000203;2.12e-14;25!UBERON:0001017;3.69e-12;75!UBERON:0000955;4.78e-12;68!UBERON:0000125;7.09e-11;9!UBERON:0002308;7.09e-11;9!UBERON:0002420;7.38e-11;9!UBERON:0007245;7.38e-11;9!UBERON:0010009;7.38e-11;9!UBERON:0010011;7.38e-11;9!UBERON:0000454;7.38e-11;9!UBERON:0001016;8.72e-11;83!UBERON:0009663;7.92e-09;7!UBERON:0004732;3.67e-08;13!UBERON:0000200;4.81e-08;6!UBERON:0002298;8.99e-08;6!UBERON:0004733;4.18e-07;12!UBERON:0002028;4.18e-07;12!UBERON:0000349;8.29e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.71e-36,56;UBERON:0005068,4.71e-36,56;UBERON:0006241,4.71e-36,56;UBERON:0007135,4.71e-36,56;UBERON:0000073,4.78e-33,53;UBERON:0002616,4.78e-33,53;UBERON:0003075,6.27e-28,82;UBERON:0007284,6.27e-28,82;UBERON:0002780,3.34e-27,41;UBERON:0001890,3.34e-27,41;UBERON:0003080,3.34e-27,41;UBERON:0006240,3.34e-27,41;UBERON:0000955,7.37e-26,68;UBERON:0006238,7.37e-26,68;UBERON:0002346,1.04e-25,86;UBERON:0001017,5.20e-25,81;UBERON:0001016,7.63e-25,89;UBERON:0001893,2.18e-23,34;UBERON:0003528,3.67e-23,34;UBERON:0002020,3.67e-23,34;UBERON:0002791,3.58e-21,32;UBERON:0001869,3.78e-21,32;UBERON:0003056,8.55e-21,61;UBERON:0010371,1.95e-20,104;UBERON:0007023,2.89e-19,114;UBERON:0010314,1.44e-18,132;UBERON:0002619,3.07e-17,22;UBERON:0001950,3.19e-15,20;UBERON:0000956,2.18e-14,25;UBERON:0000203,2.18e-14,25;UBERON:0000025,9.24e-14,192;UBERON:0000125,7.12e-11,9;UBERON:0002308,7.12e-11,9;UBERON:0002420,7.62e-11,9;UBERON:0007245,7.62e-11,9;UBERON:0010009,7.62e-11,9;UBERON:0010011,7.62e-11,9;UBERON:0000454,7.62e-11,9;UBERON:0004121,9.81e-11,171;UBERON:0000924,9.81e-11,171;UBERON:0006601,9.81e-11,171;UBERON:0003076,7.30e-10,15;UBERON:0003057,7.30e-10,15;UBERON:0004111,2.66e-09,240;UBERON:0009663,7.97e-09,7;UBERON:0004732,3.73e-08,13;UBERON:0000200,5.07e-08,6;UBERON:0002298,8.87e-08,6;UBERON:0004733,4.24e-07,12;UBERON:0002028,4.24e-07,12;UBERON:0007277,4.24e-07,12;UBERON:0000349,8.26e-07,5 | |||
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| |||
|short_description=p7@SH3PXD2A | |||
}} |
Revision as of 11:32, 10 September 2013
Short description: | p7@SH3PXD2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_SH3PXD2A_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_ENST00000427662, uc010qqr.1, uc010qqt.1_5end |
EntrezGene: | SH3PXD2A |
HGNC: | 23664 |
UniProt: | F8WCK5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.12e-07 | 12 |
lymphocyte of B lineage | 2.91e-07 | 24 |
pro-B cell | 2.91e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.85e-12 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.