FFCP PHASE1:Hg19::chr16:23847355..23847366,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5579|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9395|TSSclassifier=S|UniProt=|association_with_transcript=10bp_to_ENST00000303531_5end|coexpression_cluster_id=C3|description=CAGE_peak_3_at_PRKCB_5end|id=chr16:23847355..23847366,+|ontology_enrichment_celltype=CL:0000037!1.45e-38!172;CL:0000566!1.45e-38!172;CL:0000988!5.91e-36!182;CL:0002032!9.05e-35!165;CL:0000837!9.05e-35!165;CL:0000738!8.64e-33!140;CL:0000763!1.09e-26!112;CL:0000049!1.09e-26!112;CL:0002031!3.33e-24!124;CL:0002087!7.27e-24!119;CL:0002057!4.17e-22!42;CL:0000766!7.29e-22!76;CL:0000860!1.00e-19!45;CL:0000557!2.84e-18!71;CL:0002009!1.53e-16!65;CL:0000839!1.99e-16!70;CL:0002194!3.56e-15!63;CL:0000576!3.56e-15!63;CL:0000040!3.56e-15!63;CL:0000559!3.56e-15!63;CL:0000945!6.12e-12!24;CL:0000826!6.12e-12!24;CL:0000236!2.52e-09!14;CL:0002393!9.94e-09!9;CL:0002397!9.94e-09!9;CL:0000542!1.01e-07!53;CL:0000051!1.01e-07!53;CL:0000838!3.26e-07!52|ontology_enrichment_celltype_v019=CL:0000094;1.32e-08;8!CL:0002393;1.65e-07;6!CL:0002397;1.65e-07;6!CL:0000775;2.78e-07;3!CL:0000784;4.22e-07;3|ontology_enrichment_celltype_v019_2=CL:0002393,2.83e-12,9;CL:0002397,2.83e-12,9;CL:0000738,1.36e-10,136;CL:0000860,2.31e-10,42;CL:0002057,2.31e-10,42;CL:0000766,5.38e-10,72;CL:0000037,5.02e-09,168;CL:0000094,1.06e-08,8;CL:0000473,1.70e-08,48;CL:0000234,1.70e-08,48;CL:0000763,2.12e-08,108;CL:0000049,2.12e-08,108;CL:0002009,2.61e-08,61;CL:0000988,4.67e-08,177;CL:0000775,2.88e-07,3;CL:0000557,3.98e-07,67;CL:0000784,4.16e-07,3;CL:0002194,7.50e-07,59;CL:0000576,7.50e-07,59;CL:0000040,7.50e-07,59;CL:0000559,7.50e-07,59;CL:0002032,9.24e-07,161;CL:0000837,9.24e-07,161|ontology_enrichment_development_v019=UBERON:0006601;7.93e-09;82!CL:0002057;8.22e-08;42|ontology_enrichment_disease=DOID:2531!8.21e-07!51;DOID:0060083!8.21e-07!51|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!3.29e-32!115;UBERON:0001049!4.35e-29!57;UBERON:0005068!4.35e-29!57;UBERON:0006241!4.35e-29!57;UBERON:0007135!4.35e-29!57;UBERON:0002390!3.14e-27!102;UBERON:0003061!3.14e-27!102;UBERON:0002780!4.66e-26!41;UBERON:0001890!4.66e-26!41;UBERON:0006240!4.66e-26!41;UBERON:0001893!5.13e-26!34;UBERON:0002020!1.70e-25!34;UBERON:0003528!1.70e-25!34;UBERON:0003080!4.20e-25!42;UBERON:0002791!6.24e-25!33;UBERON:0001869!7.02e-25!32;UBERON:0002616!1.17e-24!59;UBERON:0002193!1.63e-24!112;UBERON:0000955!3.29e-22!69;UBERON:0006238!3.29e-22!69;UBERON:0002619!5.24e-22!22;UBERON:0001017!7.50e-21!82;UBERON:0001950!5.10e-20!20;UBERON:0005743!5.35e-20!86;UBERON:0000073!4.97e-19!94;UBERON:0001016!4.97e-19!94;UBERON:0002346!1.91e-18!90;UBERON:0000956!2.31e-18!25;UBERON:0000203!2.31e-18!25;UBERON:0003075!3.31e-16!86;UBERON:0007284!3.31e-16!86;UBERON:0002371!4.79e-16!80;UBERON:0003056!4.34e-14!61;UBERON:0001474!8.19e-14!86;UBERON:0002405!7.12e-12!115;UBERON:0000178!2.17e-10!15;UBERON:0000179!2.17e-10!15;UBERON:0000463!2.17e-10!15;UBERON:0004765!2.49e-10!101;UBERON:0001434!2.49e-10!101;UBERON:0002420!3.41e-09!9;UBERON:0007245!3.41e-09!9;UBERON:0010009!3.41e-09!9;UBERON:0010011!3.41e-09!9;UBERON:0000454!3.41e-09!9;UBERON:0000153!9.83e-09!129;UBERON:0007811!9.83e-09!129;UBERON:0002308!1.31e-08!9;UBERON:0000125!1.31e-08!9;UBERON:0000200!5.75e-08!6;UBERON:0000033!2.10e-07!123;UBERON:0009663!2.36e-07!7;UBERON:0001871!5.63e-07!7|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-40;22!UBERON:0001869;6.98e-40;32!UBERON:0001893;1.61e-38;34!UBERON:0002791;5.16e-37;32!UBERON:0001950;6.47e-37;20!UBERON:0003528;4.28e-36;34!UBERON:0002020;4.28e-36;34!UBERON:0000956;3.95e-35;25!UBERON:0000203;3.95e-35;25!UBERON:0002780;4.68e-31;41!UBERON:0001890;4.68e-31;41!UBERON:0000073;9.78e-25;53!UBERON:0002616;9.78e-25;53!UBERON:0000955;7.42e-19;68!UBERON:0001017;2.49e-17;75!UBERON:0001016;2.61e-14;83!UBERON:0000200;1.50e-13;6!UBERON:0000178;1.51e-12;15!UBERON:0000179;1.51e-12;15!UBERON:0000463;1.51e-12;15!UBERON:0002021;4.81e-11;5!UBERON:0001872;6.21e-11;5!UBERON:0002420;6.71e-11;9!UBERON:0007245;6.71e-11;9!UBERON:0010009;6.71e-11;9!UBERON:0010011;6.71e-11;9!UBERON:0000454;6.71e-11;9!UBERON:0000349;6.87e-11;5!UBERON:0001871;2.05e-10;6!UBERON:0007023;3.05e-10;114!UBERON:0000369;4.60e-09;4!UBERON:0002435;4.60e-09;4!UBERON:0000204;4.60e-09;4!UBERON:0002390;1.83e-08;32!UBERON:0000125;7.44e-08;9!UBERON:0002308;7.44e-08;9!UBERON:0001870;1.20e-07;3!UBERON:0009663;1.23e-07;7!UBERON:0005383;5.17e-07;3!UBERON:0005382;5.17e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.00e-45,53;UBERON:0002616,3.00e-45,53;UBERON:0001869,1.30e-44,32;UBERON:0001049,1.51e-44,56;UBERON:0005068,1.51e-44,56;UBERON:0006241,1.51e-44,56;UBERON:0007135,1.51e-44,56;UBERON:0001893,1.95e-44,34;UBERON:0002780,1.09e-43,41;UBERON:0001890,1.09e-43,41;UBERON:0003080,1.09e-43,41;UBERON:0006240,1.09e-43,41;UBERON:0002791,5.20e-41,32;UBERON:0003528,8.42e-41,34;UBERON:0002020,8.42e-41,34;UBERON:0002619,1.95e-40,22;UBERON:0000955,9.79e-39,68;UBERON:0006238,9.79e-39,68;UB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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5579 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9395 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=10bp_to_ENST00000303531_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_3_at_PRKCB_5end | |||
|id=chr16:23847355..23847366,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.45e-38!172;CL:0000566!1.45e-38!172;CL:0000988!5.91e-36!182;CL:0002032!9.05e-35!165;CL:0000837!9.05e-35!165;CL:0000738!8.64e-33!140;CL:0000763!1.09e-26!112;CL:0000049!1.09e-26!112;CL:0002031!3.33e-24!124;CL:0002087!7.27e-24!119;CL:0002057!4.17e-22!42;CL:0000766!7.29e-22!76;CL:0000860!1.00e-19!45;CL:0000557!2.84e-18!71;CL:0002009!1.53e-16!65;CL:0000839!1.99e-16!70;CL:0002194!3.56e-15!63;CL:0000576!3.56e-15!63;CL:0000040!3.56e-15!63;CL:0000559!3.56e-15!63;CL:0000945!6.12e-12!24;CL:0000826!6.12e-12!24;CL:0000236!2.52e-09!14;CL:0002393!9.94e-09!9;CL:0002397!9.94e-09!9;CL:0000542!1.01e-07!53;CL:0000051!1.01e-07!53;CL:0000838!3.26e-07!52 | |||
|ontology_enrichment_celltype_v019=CL:0000094;1.32e-08;8!CL:0002393;1.65e-07;6!CL:0002397;1.65e-07;6!CL:0000775;2.78e-07;3!CL:0000784;4.22e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.83e-12,9;CL:0002397,2.83e-12,9;CL:0000738,1.36e-10,136;CL:0000860,2.31e-10,42;CL:0002057,2.31e-10,42;CL:0000766,5.38e-10,72;CL:0000037,5.02e-09,168;CL:0000094,1.06e-08,8;CL:0000473,1.70e-08,48;CL:0000234,1.70e-08,48;CL:0000763,2.12e-08,108;CL:0000049,2.12e-08,108;CL:0002009,2.61e-08,61;CL:0000988,4.67e-08,177;CL:0000775,2.88e-07,3;CL:0000557,3.98e-07,67;CL:0000784,4.16e-07,3;CL:0002194,7.50e-07,59;CL:0000576,7.50e-07,59;CL:0000040,7.50e-07,59;CL:0000559,7.50e-07,59;CL:0002032,9.24e-07,161;CL:0000837,9.24e-07,161 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.93e-09;82!CL:0002057;8.22e-08;42 | |||
|ontology_enrichment_disease=DOID:2531!8.21e-07!51;DOID:0060083!8.21e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.29e-32!115;UBERON:0001049!4.35e-29!57;UBERON:0005068!4.35e-29!57;UBERON:0006241!4.35e-29!57;UBERON:0007135!4.35e-29!57;UBERON:0002390!3.14e-27!102;UBERON:0003061!3.14e-27!102;UBERON:0002780!4.66e-26!41;UBERON:0001890!4.66e-26!41;UBERON:0006240!4.66e-26!41;UBERON:0001893!5.13e-26!34;UBERON:0002020!1.70e-25!34;UBERON:0003528!1.70e-25!34;UBERON:0003080!4.20e-25!42;UBERON:0002791!6.24e-25!33;UBERON:0001869!7.02e-25!32;UBERON:0002616!1.17e-24!59;UBERON:0002193!1.63e-24!112;UBERON:0000955!3.29e-22!69;UBERON:0006238!3.29e-22!69;UBERON:0002619!5.24e-22!22;UBERON:0001017!7.50e-21!82;UBERON:0001950!5.10e-20!20;UBERON:0005743!5.35e-20!86;UBERON:0000073!4.97e-19!94;UBERON:0001016!4.97e-19!94;UBERON:0002346!1.91e-18!90;UBERON:0000956!2.31e-18!25;UBERON:0000203!2.31e-18!25;UBERON:0003075!3.31e-16!86;UBERON:0007284!3.31e-16!86;UBERON:0002371!4.79e-16!80;UBERON:0003056!4.34e-14!61;UBERON:0001474!8.19e-14!86;UBERON:0002405!7.12e-12!115;UBERON:0000178!2.17e-10!15;UBERON:0000179!2.17e-10!15;UBERON:0000463!2.17e-10!15;UBERON:0004765!2.49e-10!101;UBERON:0001434!2.49e-10!101;UBERON:0002420!3.41e-09!9;UBERON:0007245!3.41e-09!9;UBERON:0010009!3.41e-09!9;UBERON:0010011!3.41e-09!9;UBERON:0000454!3.41e-09!9;UBERON:0000153!9.83e-09!129;UBERON:0007811!9.83e-09!129;UBERON:0002308!1.31e-08!9;UBERON:0000125!1.31e-08!9;UBERON:0000200!5.75e-08!6;UBERON:0000033!2.10e-07!123;UBERON:0009663!2.36e-07!7;UBERON:0001871!5.63e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.13e-40;22!UBERON:0001869;6.98e-40;32!UBERON:0001893;1.61e-38;34!UBERON:0002791;5.16e-37;32!UBERON:0001950;6.47e-37;20!UBERON:0003528;4.28e-36;34!UBERON:0002020;4.28e-36;34!UBERON:0000956;3.95e-35;25!UBERON:0000203;3.95e-35;25!UBERON:0002780;4.68e-31;41!UBERON:0001890;4.68e-31;41!UBERON:0000073;9.78e-25;53!UBERON:0002616;9.78e-25;53!UBERON:0000955;7.42e-19;68!UBERON:0001017;2.49e-17;75!UBERON:0001016;2.61e-14;83!UBERON:0000200;1.50e-13;6!UBERON:0000178;1.51e-12;15!UBERON:0000179;1.51e-12;15!UBERON:0000463;1.51e-12;15!UBERON:0002021;4.81e-11;5!UBERON:0001872;6.21e-11;5!UBERON:0002420;6.71e-11;9!UBERON:0007245;6.71e-11;9!UBERON:0010009;6.71e-11;9!UBERON:0010011;6.71e-11;9!UBERON:0000454;6.71e-11;9!UBERON:0000349;6.87e-11;5!UBERON:0001871;2.05e-10;6!UBERON:0007023;3.05e-10;114!UBERON:0000369;4.60e-09;4!UBERON:0002435;4.60e-09;4!UBERON:0000204;4.60e-09;4!UBERON:0002390;1.83e-08;32!UBERON:0000125;7.44e-08;9!UBERON:0002308;7.44e-08;9!UBERON:0001870;1.20e-07;3!UBERON:0009663;1.23e-07;7!UBERON:0005383;5.17e-07;3!UBERON:0005382;5.17e-07;3 | |||
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| |||
|short_description=p3@PRKCB | |||
}} |
Revision as of 09:44, 11 September 2013
Short description: | p3@PRKCB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PRKCB_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 10bp_to_ENST00000303531_5end |
EntrezGene: | PRKCB |
HGNC: | 9395 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.83e-12 | 9 |
CD14-positive, CD16-positive monocyte | 2.83e-12 | 9 |
leukocyte | 1.36e-10 | 136 |
classical monocyte | 2.31e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.31e-10 | 42 |
myeloid leukocyte | 5.38e-10 | 72 |
hematopoietic stem cell | 5.02e-09 | 168 |
granulocyte | 1.06e-08 | 8 |
defensive cell | 1.70e-08 | 48 |
phagocyte | 1.70e-08 | 48 |
myeloid cell | 2.12e-08 | 108 |
common myeloid progenitor | 2.12e-08 | 108 |
macrophage dendritic cell progenitor | 2.61e-08 | 61 |
hematopoietic cell | 4.67e-08 | 177 |
neutrophil | 2.88e-07 | 3 |
granulocyte monocyte progenitor cell | 3.98e-07 | 67 |
plasmacytoid dendritic cell | 4.16e-07 | 3 |
monopoietic cell | 7.50e-07 | 59 |
monocyte | 7.50e-07 | 59 |
monoblast | 7.50e-07 | 59 |
promonocyte | 7.50e-07 | 59 |
hematopoietic oligopotent progenitor cell | 9.24e-07 | 161 |
hematopoietic multipotent progenitor cell | 9.24e-07 | 161 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.