FFCP PHASE1:Hg19::chr19:36359341..36359352,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=333|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=597|TSSclassifier=S|UniProt=P51693|association_with_transcript=-48bp_to_ENST00000221891,NM_001024807,NM_005166,uc002oce.2,uc002ocf.2,uc002ocg.2_5end|coexpression_cluster_id=C3287|description=CAGE_peak_6_at_APLP1_5end|id=chr19:36359341..36359352,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000047,3.59e-08,8|ontology_enrichment_development_v019=UBERON:0006601;2.05e-19;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.76e-45!94;UBERON:0001016!2.76e-45!94;UBERON:0001049!1.26e-44!57;UBERON:0005068!1.26e-44!57;UBERON:0006241!1.26e-44!57;UBERON:0007135!1.26e-44!57;UBERON:0005743!2.19e-44!86;UBERON:0003075!1.10e-42!86;UBERON:0007284!1.10e-42!86;UBERON:0001017!2.63e-40!82;UBERON:0002346!6.90e-40!90;UBERON:0002616!3.05e-36!59;UBERON:0000955!1.03e-34!69;UBERON:0006238!1.03e-34!69;UBERON:0001893!1.00e-32!34;UBERON:0002020!1.20e-32!34;UBERON:0003528!1.20e-32!34;UBERON:0002780!5.22e-32!41;UBERON:0001890!5.22e-32!41;UBERON:0006240!5.22e-32!41;UBERON:0002791!2.18e-31!33;UBERON:0003080!5.66e-31!42;UBERON:0003056!2.63e-30!61;UBERON:0001869!3.75e-30!32;UBERON:0000956!5.23e-24!25;UBERON:0000203!5.23e-24!25;UBERON:0001950!1.09e-23!20;UBERON:0002619!1.93e-23!22;UBERON:0004121!3.36e-23!169;UBERON:0000924!3.68e-22!173;UBERON:0006601!3.68e-22!173;UBERON:0000033!1.62e-21!123;UBERON:0007023!8.82e-21!115;UBERON:0000153!1.72e-20!129;UBERON:0007811!1.72e-20!129;UBERON:0003076!1.49e-14!15;UBERON:0003057!1.49e-14!15;UBERON:0004732!1.88e-12!13;UBERON:0004733!4.37e-11!12;UBERON:0002028!4.37e-11!12;UBERON:0007277!4.37e-11!12;UBERON:0000025!7.86e-11!194;UBERON:0002420!4.98e-10!9;UBERON:0007245!4.98e-10!9;UBERON:0010009!4.98e-10!9;UBERON:0010011!4.98e-10!9;UBERON:0000454!4.98e-10!9;UBERON:0002308!5.04e-10!9;UBERON:0000125!5.04e-10!9;UBERON:0000483!7.67e-10!309;UBERON:0000119!1.53e-09!312;UBERON:0001871!2.46e-09!7;UBERON:0000064!3.06e-09!219;UBERON:0002298!3.47e-09!8;UBERON:0002021!2.76e-08!5;UBERON:0001872!3.18e-08!5;UBERON:0009663!1.58e-07!7;UBERON:0002680!2.00e-07!9;UBERON:0001895!2.00e-07!9;UBERON:0010092!2.00e-07!9;UBERON:0000475!4.46e-07!365;UBERON:0000966!8.04e-07!5;UBERON:0005388!8.04e-07!5;UBERON:0001802!8.04e-07!5;UBERON:0004111!9.02e-07!241|ontology_enrichment_uberon_v019=UBERON:0001893;1.25e-53;34!UBERON:0001950;3.88e-52;20!UBERON:0003528;5.60e-50;34!UBERON:0002020;5.60e-50;34!UBERON:0001869;1.38e-47;32!UBERON:0002791;2.09e-47;32!UBERON:0002619;3.10e-47;22!UBERON:0000073;2.50e-46;53!UBERON:0002616;2.50e-46;53!UBERON:0002780;3.38e-42;41!UBERON:0001890;3.38e-42;41!UBERON:0000956;2.70e-41;25!UBERON:0000203;2.70e-41;25!UBERON:0000955;6.95e-29;68!UBERON:0001016;2.41e-28;83!UBERON:0001017;5.41e-28;75!UBERON:0004732;1.41e-23;13!UBERON:0002298;3.39e-23;6!UBERON:0000125;2.94e-20;9!UBERON:0002308;2.94e-20;9!UBERON:0004733;4.44e-20;12!UBERON:0002028;4.44e-20;12!UBERON:0001872;8.42e-20;5!UBERON:0000200;1.84e-16;6!UBERON:0002420;2.73e-15;9!UBERON:0007245;2.73e-15;9!UBERON:0010009;2.73e-15;9!UBERON:0010011;2.73e-15;9!UBERON:0000454;2.73e-15;9!UBERON:0001871;9.53e-15;6!UBERON:0009663;1.15e-13;7!UBERON:0002021;1.45e-13;5!UBERON:0000988;1.59e-12;3!UBERON:0001896;2.02e-12;3!UBERON:0005290;2.02e-12;3!UBERON:0007023;3.15e-12;114!UBERON:0002680;4.83e-11;9!UBERON:0001895;4.83e-11;9!UBERON:0011216;7.58e-11;132!UBERON:0005162;1.89e-09;2!UBERON:0000122;1.89e-09;2!UBERON:0000369;1.97e-09;4!UBERON:0002435;1.97e-09;4!UBERON:0000204;1.97e-09;4!UBERON:0001897;3.80e-09;2!UBERON:0010225;3.80e-09;2!UBERON:0002771;8.15e-09;2!UBERON:0002148;8.15e-09;2!UBERON:0006331;8.15e-09;2!UBERON:0009662;8.15e-09;2!UBERON:0010314;7.10e-08;132|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.76e-88,56;UBERON:0005068,5.76e-88,56;UBERON:0006241,5.76e-88,56;UBERON:0007135,5.76e-88,56;UBERON:0000073,3.40e-83,53;UBERON:0002616,3.40e-83,53;UBERON:0001017,2.40e-80,81;UBERON:0001016,3.39e-79,89;UBERON:0000955,2.81e-66,68;UBERON:0006238,2.81e-66,68;UBERON:0002780,2.24e-63,41;UBERON:0001890,2.24e-63,41;UBERON:0003080,2.24e-63,41;UBERON:0006240,2.24e-63,41;UBERON:0003075,2.13e-61,82;UBERON:0007284,2.13e-61,82;UBERON:0001893,1.74e-60,34;UBERON:0003528,2.62e-60,34;UBERON:0002020,2.62e-60,34;UBERON:0002346,3.56e-58,86;UBERON:0001869,6.50e-54,32;UBERON:0002791,8.94e-54,32;UBERON:0001950,3.08e-52,20;UBERON:0002619,2.52e-47,22;UBERON:0010371,1.05e-46,104;UBERON:0003056,2.88e-44,61;UBERON:0000956,2.25e-41,25;UBERON:0000203,2.25e-41,25;UBERON:0004121,2.04e-37,171;UBERON:0000924,2.04e-37,171;UBERON:0006601,2.04e-37,171;UBERON:0007023,2.37e-37,114;UBERON:0010314,3.26e-37,132;UBERON:0011216,1.63e-29,223;UBERON:0003076,1.96e-24,15;UBERON:0003057,1.96e-24,15;UBERON:0004732,1.44e-23,13;UBERON:0002298,2.49e-23,6;UBERON:0000125,2.91e-20,9;UBERON:0002308,2.91e-20,9;UBERON:0004733,4.47e-20,12;UBERON:0002028,4.47e-20,12;UBERON:0007277,4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,1.30905207102113,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0.267964130156178,4.97501663675268,1.03432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0.406896178315738,0,0,0|short_description=p6@APLP1}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=333 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=597 | |||
|TSSclassifier=S | |||
|UniProt=P51693 | |||
|association_with_transcript=-48bp_to_ENST00000221891,NM_001024807,NM_005166,uc002oce.2,uc002ocf.2,uc002ocg.2_5end | |||
|coexpression_cluster_id=C3287 | |||
|description=CAGE_peak_6_at_APLP1_5end | |||
|id=chr19:36359341..36359352,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,3.59e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.05e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.76e-45!94;UBERON:0001016!2.76e-45!94;UBERON:0001049!1.26e-44!57;UBERON:0005068!1.26e-44!57;UBERON:0006241!1.26e-44!57;UBERON:0007135!1.26e-44!57;UBERON:0005743!2.19e-44!86;UBERON:0003075!1.10e-42!86;UBERON:0007284!1.10e-42!86;UBERON:0001017!2.63e-40!82;UBERON:0002346!6.90e-40!90;UBERON:0002616!3.05e-36!59;UBERON:0000955!1.03e-34!69;UBERON:0006238!1.03e-34!69;UBERON:0001893!1.00e-32!34;UBERON:0002020!1.20e-32!34;UBERON:0003528!1.20e-32!34;UBERON:0002780!5.22e-32!41;UBERON:0001890!5.22e-32!41;UBERON:0006240!5.22e-32!41;UBERON:0002791!2.18e-31!33;UBERON:0003080!5.66e-31!42;UBERON:0003056!2.63e-30!61;UBERON:0001869!3.75e-30!32;UBERON:0000956!5.23e-24!25;UBERON:0000203!5.23e-24!25;UBERON:0001950!1.09e-23!20;UBERON:0002619!1.93e-23!22;UBERON:0004121!3.36e-23!169;UBERON:0000924!3.68e-22!173;UBERON:0006601!3.68e-22!173;UBERON:0000033!1.62e-21!123;UBERON:0007023!8.82e-21!115;UBERON:0000153!1.72e-20!129;UBERON:0007811!1.72e-20!129;UBERON:0003076!1.49e-14!15;UBERON:0003057!1.49e-14!15;UBERON:0004732!1.88e-12!13;UBERON:0004733!4.37e-11!12;UBERON:0002028!4.37e-11!12;UBERON:0007277!4.37e-11!12;UBERON:0000025!7.86e-11!194;UBERON:0002420!4.98e-10!9;UBERON:0007245!4.98e-10!9;UBERON:0010009!4.98e-10!9;UBERON:0010011!4.98e-10!9;UBERON:0000454!4.98e-10!9;UBERON:0002308!5.04e-10!9;UBERON:0000125!5.04e-10!9;UBERON:0000483!7.67e-10!309;UBERON:0000119!1.53e-09!312;UBERON:0001871!2.46e-09!7;UBERON:0000064!3.06e-09!219;UBERON:0002298!3.47e-09!8;UBERON:0002021!2.76e-08!5;UBERON:0001872!3.18e-08!5;UBERON:0009663!1.58e-07!7;UBERON:0002680!2.00e-07!9;UBERON:0001895!2.00e-07!9;UBERON:0010092!2.00e-07!9;UBERON:0000475!4.46e-07!365;UBERON:0000966!8.04e-07!5;UBERON:0005388!8.04e-07!5;UBERON:0001802!8.04e-07!5;UBERON:0004111!9.02e-07!241 | |||
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|short_description=p6@APLP1 | |||
}} |
Revision as of 20:14, 11 September 2013
Short description: | p6@APLP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_APLP1_5end |
Coexpression cluster: | C3287_Wilms_brain_duodenum_occipital_temporal_cerebellum_parietal |
Association with transcript: | -48bp_to_ENST00000221891, NM_001024807, NM_005166, uc002oce.2, uc002ocf.2, uc002ocg.2_5end |
EntrezGene: | APLP1 |
HGNC: | 597 |
UniProt: | P51693 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 3.59e-08 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.