FFCP PHASE1:Hg19::chr1:179560979..179560998,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=163589|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20614|TSSclassifier=S|UniProt=Q8NAT2|association_with_transcript=0bp_to_NM_001199089_5end|coexpression_cluster_id=C1|description=CAGE_peak_1_at_TDRD5_5end|id=chr1:179560979..179560998,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0010122;3.13e-19;2!UBERON:0008425;2.62e-10;1!UBERON:0009117;5.91e-09;10!UBERON:0005564;5.91e-09;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:178;2.62e-10;1!DOID:326;2.62e-10;1!DOID:3978;2.62e-10;1!DOID:3394;2.62e-10;1!DOID:5844;2.62e-10;1!DOID:5093;4.34e-10;4!DOID:1612;4.34e-10;4|ontology_enrichment_disease_v019_2=DOID:178,2.74e-10,1;DOID:326,2.74e-10,1;DOID:3978,2.74e-10,1;DOID:3394,2.74e-10,1;DOID:5844,2.74e-10,1;DOID:5093,3.79e-10,4;DOID:1612,3.79e-10,4|ontology_enrichment_uberon=UBERON:0007023!1.48e-34!115;UBERON:0003080!7.51e-33!42;UBERON:0001049!1.57e-32!57;UBERON:0005068!1.57e-32!57;UBERON:0006241!1.57e-32!57;UBERON:0007135!1.57e-32!57;UBERON:0002616!4.08e-31!59;UBERON:0002780!4.29e-31!41;UBERON:0001890!4.29e-31!41;UBERON:0006240!4.29e-31!41;UBERON:0002020!1.85e-29!34;UBERON:0003528!1.85e-29!34;UBERON:0001869!7.13e-29!32;UBERON:0001893!7.77e-27!34;UBERON:0000955!1.38e-26!69;UBERON:0006238!1.38e-26!69;UBERON:0001017!1.74e-25!82;UBERON:0003056!1.87e-25!61;UBERON:0002791!2.09e-25!33;UBERON:0005743!2.71e-25!86;UBERON:0003075!3.10e-24!86;UBERON:0007284!3.10e-24!86;UBERON:0002346!1.06e-22!90;UBERON:0000073!6.10e-22!94;UBERON:0001016!6.10e-22!94;UBERON:0002619!6.42e-20!22;UBERON:0001950!1.53e-19!20;UBERON:0000033!2.77e-18!123;UBERON:0000153!5.28e-18!129;UBERON:0007811!5.28e-18!129;UBERON:0000956!3.98e-17!25;UBERON:0000203!3.98e-17!25;UBERON:0002308!4.60e-15!9;UBERON:0000125!4.60e-15!9;UBERON:0002420!4.21e-12!9;UBERON:0007245!4.21e-12!9;UBERON:0010009!4.21e-12!9;UBERON:0010011!4.21e-12!9;UBERON:0000454!4.21e-12!9;UBERON:0004121!7.80e-12!169;UBERON:0009663!1.01e-11!7;UBERON:0000924!2.56e-11!173;UBERON:0006601!2.56e-11!173;UBERON:0000369!2.83e-10!4;UBERON:0002435!2.83e-10!4;UBERON:0000204!2.83e-10!4;UBERON:0010082!2.83e-10!4;UBERON:0003135!3.59e-10!11;UBERON:0002298!1.23e-09!8;UBERON:0000025!2.04e-09!194;UBERON:0001871!3.59e-09!7;UBERON:0004111!6.03e-09!241;UBERON:0005383!2.64e-08!3;UBERON:0005382!2.64e-08!3;UBERON:0000477!2.92e-08!286;UBERON:0006947!6.11e-08!3;UBERON:0004054!6.11e-08!3;UBERON:0000483!1.28e-07!309;UBERON:0002110!1.38e-07!3;UBERON:0006242!1.38e-07!3;UBERON:0000473!1.51e-07!8;UBERON:0000119!1.99e-07!312;UBERON:0000481!3.00e-07!347;UBERON:0000988!3.41e-07!3;UBERON:0002771!4.23e-07!3;UBERON:0002021!4.67e-07!5;UBERON:0000475!5.80e-07!365;UBERON:0003101!6.14e-07!22;UBERON:0000079!6.14e-07!22|ontology_enrichment_uberon_v019=UBERON:0005383;9.40e-28;3!UBERON:0005382;9.40e-28;3!UBERON:0003296;4.61e-21;4!UBERON:0010133;4.61e-21;4!UBERON:0000369;5.47e-21;4!UBERON:0002435;5.47e-21;4!UBERON:0000204;5.47e-21;4!UBERON:0003135;1.02e-20;11!UBERON:0000007;2.48e-19;2!UBERON:0001873;3.13e-19;2!UBERON:0006947;6.55e-13;3!UBERON:0004054;6.55e-13;3!UBERON:0001894;2.70e-12;7!UBERON:0009663;2.97e-12;7!UBERON:0000473;4.55e-11;8!UBERON:0001874;2.62e-10;1!UBERON:0001000;2.62e-10;1!UBERON:0001301;2.62e-10;1!UBERON:0004913;2.62e-10;1!UBERON:0003703;2.62e-10;1!UBERON:0005352;2.62e-10;1!UBERON:0001174;2.62e-10;1!UBERON:0004914;2.62e-10;1!UBERON:0003101;2.63e-10;22!UBERON:0000079;2.63e-10;22!UBERON:0005904;6.53e-10;4!UBERON:0002420;1.20e-09;9!UBERON:0000125;1.20e-09;9!UBERON:0007245;1.20e-09;9!UBERON:0002308;1.20e-09;9!UBERON:0010009;1.20e-09;9!UBERON:0010011;1.20e-09;9!UBERON:0000454;1.20e-09;9!UBERON:0000058;1.25e-08;10!UBERON:0000073;2.13e-07;53!UBERON:0002616;2.13e-07;53!UBERON:0002298;6.88e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0005383,1.08e-27,3;UBERON:0005382,1.08e-27,3;UBERON:0003296,4.31e-21,4;UBERON:0010133,4.31e-21,4;UBERON:0000369,6.07e-21,4;UBERON:0002435,6.07e-21,4;UBERON:0000204,6.07e-21,4;UBERON:0010082,6.07e-21,4;UBERON:0003135,1.39e-20,11;UBERON:0000007,3.44e-19,2;UBERON:0001873,4.53e-19,2;UBERON:0010122,4.53e-19,2;UBERON:0006947,6.97e-13,3;UBERON:0004054,6.97e-13,3;UBERON:0001894,2.60e-12,7;UBERON:0006222,2.60e-12,7;UBERON:0009663,3.15e-12,7;UBERON:0007023,2.73e-11,114;UBERON:0000473,5.68e-11,8;UBERON:0004913,1.57e-10,1;UBERON:0003703,1.57e-10,1;UBERON:0001174,1.57e-10,1;UBERON:0004914,1.57e-10,1;UBERON:0001874,2.08e-10,1;UBERON:0001301,2.50e-10,1;UBERON:0001000,3.01e-10,1;UBERON:0005352,3.01e-10,1;UBERON:0003101,3.05e-10,22;UBERON:0000079,3.05e-10,22;UBERON:0005904,6.84e-10,4;UBERON:0000073,1.04e-09,53;UBERON:0002616,1.04e-09,53;UBERON:0002420,1.25e-09,9;UBERON:0000125,1.25e-09,9;UBERON:0007245,1.25e-09,9;UBERON:0002308,1.25e-09,9;UBERON:0010009,1.25e-09,9;UBERON:0010011,1.25e-09,9;UBERON:0000454,1.25e-09,9;UBERON:0001049,3.81e-09,56;UBERON:0005068,3.81e-09,56;UBERON:0006241,3.81e-09,56;UBERON:0007135,3.81e-09,56;UBERON:0003075,1.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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=163589 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20614 | |||
|TSSclassifier=S | |||
|UniProt=Q8NAT2 | |||
|association_with_transcript=0bp_to_NM_001199089_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_TDRD5_5end | |||
|id=chr1:179560979..179560998,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.13e-19;2!UBERON:0008425;2.62e-10;1!UBERON:0009117;5.91e-09;10!UBERON:0005564;5.91e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:178;2.62e-10;1!DOID:326;2.62e-10;1!DOID:3978;2.62e-10;1!DOID:3394;2.62e-10;1!DOID:5844;2.62e-10;1!DOID:5093;4.34e-10;4!DOID:1612;4.34e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,2.74e-10,1;DOID:326,2.74e-10,1;DOID:3978,2.74e-10,1;DOID:3394,2.74e-10,1;DOID:5844,2.74e-10,1;DOID:5093,3.79e-10,4;DOID:1612,3.79e-10,4 | |||
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|short_description=p1@TDRD5 | |||
}} |
Revision as of 02:02, 12 September 2013
Short description: | p1@TDRD5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_TDRD5_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_001199089_5end |
EntrezGene: | TDRD5 |
HGNC: | 20614 |
UniProt: | Q8NAT2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular disease | 2.74e-10 | 1 |
ischemia | 2.74e-10 | 1 |
extrinsic cardiomyopathy | 2.74e-10 | 1 |
myocardial ischemia | 2.74e-10 | 1 |
myocardial infarction | 2.74e-10 | 1 |
thoracic cancer | 3.79e-10 | 4 |
breast cancer | 3.79e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.