FFCP PHASE1:Mm9::chr14:52948033..52948045,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|EntrezGene=50524|HGNC=|UniProt=Q9QX96|association_with_transcript=299bp_to_NM_015772,uc007tpf.1_5end|description=CAGE_peak_12_at_Sall2_5end|id=chr14:52948033..52948045,-|ontology_enrichment_celltype=CL:0000117!1.12e-23!23;CL:0000337!1.12e-23!23;CL:0000221!5.60e-20!44;CL:0000133!5.60e-20!44;CL:0002319!8.82e-19!43;CL:0000540!4.40e-16!33;CL:0000047!4.40e-16!33;CL:0000031!4.40e-16!33;CL:0000404!4.40e-16!33;CL:0000055!7.49e-15!50;CL:0000393!1.76e-12!39;CL:0000211!1.76e-12!39;CL:0002321!4.00e-09!70;CL:0000220!4.00e-09!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.52e-23,23;CL:0000337,5.52e-23,23;CL:0000221,8.92e-20,44;CL:0000133,8.92e-20,44;CL:0000540,5.88e-18,33;CL:0000047,5.88e-18,33;CL:0000031,5.88e-18,33;CL:0000404,5.88e-18,33;CL:0002319,1.20e-17,43;CL:0000393,8.85e-15,39;CL:0000211,8.85e-15,39;CL:0002321,3.39e-11,70;CL:0002613,4.14e-11,3;CL:0000197,1.63e-08,2;CL:0002491,1.63e-08,2;CL:0000098,1.63e-08,2;CL:0002611,8.88e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.72e-30!73;UBERON:0005743!2.72e-30!73;UBERON:0000073!4.41e-29!75;UBERON:0001016!4.41e-29!75;UBERON:0004121!4.64e-24!102;UBERON:0000924!4.64e-24!102;UBERON:0006601!4.64e-24!102;UBERON:0000033!1.36e-23!63;UBERON:0001049!2.57e-23!52;UBERON:0005068!2.57e-23!52;UBERON:0006241!2.57e-23!52;UBERON:0007135!2.57e-23!52;UBERON:0000955!3.76e-21!50;UBERON:0006238!3.76e-21!50;UBERON:0002616!3.61e-20!49;UBERON:0002346!2.45e-19!71;UBERON:0003075!2.45e-19!71;UBERON:0007284!2.45e-19!71;UBERON:0003056!1.09e-17!49;UBERON:0003080!1.61e-16!40;UBERON:0002780!1.47e-15!39;UBERON:0001890!1.47e-15!39;UBERON:0006240!1.47e-15!39;UBERON:0007811!5.78e-14!86;UBERON:0000153!1.40e-12!94;UBERON:0002020!2.13e-12!34;UBERON:0001894!4.62e-10!10;UBERON:0006222!4.62e-10!10;UBERON:0000007!2.42e-08!8;UBERON:0003296!2.42e-08!8;UBERON:0010133!2.42e-08!8;UBERON:0002240!4.66e-08!6;UBERON:0005174!4.66e-08!6;UBERON:0001137!4.66e-08!6;UBERON:0002791!4.74e-08!29;UBERON:0003528!4.74e-08!29;UBERON:0001893!4.74e-08!29;UBERON:0002298!1.09e-07!6;UBERON:0002420!1.16e-07!8;UBERON:0007245!1.16e-07!8;UBERON:0010009!1.16e-07!8;UBERON:0010011!1.16e-07!8;UBERON:0000454!1.16e-07!8;UBERON:0003076!1.71e-07!12;UBERON:0003057!1.71e-07!12;UBERON:0001948!4.23e-07!5;UBERON:0002315!4.23e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.89e-21,73;UBERON:0001016,1.83e-20,75;UBERON:0000073,3.61e-17,54;UBERON:0004121,4.50e-17,95;UBERON:0000924,4.50e-17,95;UBERON:0006601,4.50e-17,95;UBERON:0000007,3.33e-15,8;UBERON:0003296,3.33e-15,8;UBERON:0010133,3.33e-15,8;UBERON:0001049,7.15e-14,52;UBERON:0005068,7.15e-14,52;UBERON:0006241,7.15e-14,52;UBERON:0007135,7.15e-14,52;UBERON:0001894,4.70e-12,10;UBERON:0006222,4.70e-12,10;UBERON:0010371,5.27e-12,73;UBERON:0001948,3.43e-11,5;UBERON:0002315,3.43e-11,5;UBERON:0002420,9.65e-11,8;UBERON:0007245,9.65e-11,8;UBERON:0010009,9.65e-11,8;UBERON:0010011,9.65e-11,8;UBERON:0000454,9.65e-11,8;UBERON:0002346,1.09e-10,64;UBERON:0003075,1.09e-10,64;UBERON:0007284,1.09e-10,64;UBERON:0003080,3.32e-10,40;UBERON:0002240,2.41e-09,6;UBERON:0005174,2.41e-09,6;UBERON:0001137,2.41e-09,6;UBERON:0002780,7.80e-09,39;UBERON:0001890,7.80e-09,39;UBERON:0006240,7.80e-09,39;UBERON:0010314,8.43e-09,92;UBERON:0002616,1.38e-08,46;UBERON:0004766,1.63e-08,2;UBERON:0008193,1.63e-08,2;UBERON:0005913,1.63e-08,2;UBERON:0011158,1.63e-08,2;UBERON:0005744,1.63e-08,2;UBERON:0003457,1.63e-08,2;UBERON:0008001,1.63e-08,2;UBERON:0007497,1.63e-08,2;UBERON:0009955,1.63e-08,2;UBERON:0003067,1.63e-08,2;UBERON:0002546,1.63e-08,2;UBERON:0007914,1.63e-08,2;UBERON:0005253,1.63e-08,2;UBERON:0002227,1.63e-08,2;UBERON:0001846,1.63e-08,2;UBERON:0004339,1.63e-08,2;UBERON:0002105,1.63e-08,2;UBERON:0001678,1.63e-08,2;UBERON:0003128,1.63e-08,2;UBERON:0001694,1.63e-08,2;UBERON:0004681,1.63e-08,2;UBERON:0001839,1.63e-08,2;UBERON:0001690,1.63e-08,2;UBERON:0001844,1.63e-08,2;UBERON:0001849,1.63e-08,2;UBERON:0002499,1.63e-08,2;UBERON:0001855,1.63e-08,2;UBERON:0011137,1.63e-08,2;UBERON:0001703,1.63e-08,2;UBERON:0010323,1.63e-08,2;UBERON:0003129,1.63e-08,2;UBERON:0003069,1.63e-08,2;UBERON:0003051,1.63e-08,2;UBERON:0004637,1.63e-08,2;UBERON:0004761,1.63e-08,2;UBERON:0010113,1.63e-08,2;UBERON:0009123,1.63e-08,2;UBERON:0010351,1.63e-08,2;UBERON:0009617,1.63e-08,2;UBERON:0005641,1.63e-08,2;UBERON:0010349,1.63e-08,2;UBERON:0000955,2.33e-08,47;UBERON:0006238,2.33e-08,47;UBERON:0002950,4.56e-08,4;UBERON:0001891,4.56e-08,4;UBERON:0009616,4.56e-08,4;UBERON:0010286,4.56e-08,4;UBERON:0003056,6.29e-08,49;UBERON:0002256,8.88e-08,2;UBERON:0000369,7.78e-07,5;UBERON:0002435,7.78e-07,5;UBERON:0000204,7.78e-07,5;UBERON:0010082,7.78e-07,5;UBERON:0002020,8.08e-07,34|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.5869729378161,3.80298842103708,0.338844532069132,0,0,0,0,0.599200221036809,2.68952813725088,0.414758449233911,0.270011876663381,0.420649922702764,1.42825492201902,1.76694832761291,0.367472397644862,0.479227355091182,0,1.10115880999389,1.65993539510744,0.46081959976873,2.63772575460388,2.56165402086747,1.04182674111352,0.558365998002762,2.25105044012672,1.22238598221448,1.47314292736834,1.70846016958924,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,5.63373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.486723789203273,0,0,0,0,0.780722657776222,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,4.68158844481407,3.88076051348264,1.50035924522115,1.06404140185364,1.60531935841864,0,1.2178597964584,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0.906284817968409,0,1.86817225651518,1.59609949360412,0.682934423016537,0.972426868273176,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0,0,0|short_description=p12@Sall2}} | ||
|EntrezGene=50524 | |||
|HGNC= | |||
|UniProt=Q9QX96 | |||
|association_with_transcript=299bp_to_NM_015772,uc007tpf.1_5end | |||
|description=CAGE_peak_12_at_Sall2_5end | |||
|id=chr14:52948033..52948045,- | |||
|ontology_enrichment_celltype=CL:0000117!1.12e-23!23;CL:0000337!1.12e-23!23;CL:0000221!5.60e-20!44;CL:0000133!5.60e-20!44;CL:0002319!8.82e-19!43;CL:0000540!4.40e-16!33;CL:0000047!4.40e-16!33;CL:0000031!4.40e-16!33;CL:0000404!4.40e-16!33;CL:0000055!7.49e-15!50;CL:0000393!1.76e-12!39;CL:0000211!1.76e-12!39;CL:0002321!4.00e-09!70;CL:0000220!4.00e-09!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.52e-23,23;CL:0000337,5.52e-23,23;CL:0000221,8.92e-20,44;CL:0000133,8.92e-20,44;CL:0000540,5.88e-18,33;CL:0000047,5.88e-18,33;CL:0000031,5.88e-18,33;CL:0000404,5.88e-18,33;CL:0002319,1.20e-17,43;CL:0000393,8.85e-15,39;CL:0000211,8.85e-15,39;CL:0002321,3.39e-11,70;CL:0002613,4.14e-11,3;CL:0000197,1.63e-08,2;CL:0002491,1.63e-08,2;CL:0000098,1.63e-08,2;CL:0002611,8.88e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.72e-30!73;UBERON:0005743!2.72e-30!73;UBERON:0000073!4.41e-29!75;UBERON:0001016!4.41e-29!75;UBERON:0004121!4.64e-24!102;UBERON:0000924!4.64e-24!102;UBERON:0006601!4.64e-24!102;UBERON:0000033!1.36e-23!63;UBERON:0001049!2.57e-23!52;UBERON:0005068!2.57e-23!52;UBERON:0006241!2.57e-23!52;UBERON:0007135!2.57e-23!52;UBERON:0000955!3.76e-21!50;UBERON:0006238!3.76e-21!50;UBERON:0002616!3.61e-20!49;UBERON:0002346!2.45e-19!71;UBERON:0003075!2.45e-19!71;UBERON:0007284!2.45e-19!71;UBERON:0003056!1.09e-17!49;UBERON:0003080!1.61e-16!40;UBERON:0002780!1.47e-15!39;UBERON:0001890!1.47e-15!39;UBERON:0006240!1.47e-15!39;UBERON:0007811!5.78e-14!86;UBERON:0000153!1.40e-12!94;UBERON:0002020!2.13e-12!34;UBERON:0001894!4.62e-10!10;UBERON:0006222!4.62e-10!10;UBERON:0000007!2.42e-08!8;UBERON:0003296!2.42e-08!8;UBERON:0010133!2.42e-08!8;UBERON:0002240!4.66e-08!6;UBERON:0005174!4.66e-08!6;UBERON:0001137!4.66e-08!6;UBERON:0002791!4.74e-08!29;UBERON:0003528!4.74e-08!29;UBERON:0001893!4.74e-08!29;UBERON:0002298!1.09e-07!6;UBERON:0002420!1.16e-07!8;UBERON:0007245!1.16e-07!8;UBERON:0010009!1.16e-07!8;UBERON:0010011!1.16e-07!8;UBERON:0000454!1.16e-07!8;UBERON:0003076!1.71e-07!12;UBERON:0003057!1.71e-07!12;UBERON:0001948!4.23e-07!5;UBERON:0002315!4.23e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.89e-21,73;UBERON:0001016,1.83e-20,75;UBERON:0000073,3.61e-17,54;UBERON:0004121,4.50e-17,95;UBERON:0000924,4.50e-17,95;UBERON:0006601,4.50e-17,95;UBERON:0000007,3.33e-15,8;UBERON:0003296,3.33e-15,8;UBERON:0010133,3.33e-15,8;UBERON:0001049,7.15e-14,52;UBERON:0005068,7.15e-14,52;UBERON:0006241,7.15e-14,52;UBERON:0007135,7.15e-14,52;UBERON:0001894,4.70e-12,10;UBERON:0006222,4.70e-12,10;UBERON:0010371,5.27e-12,73;UBERON:0001948,3.43e-11,5;UBERON:0002315,3.43e-11,5;UBERON:0002420,9.65e-11,8;UBERON:0007245,9.65e-11,8;UBERON:0010009,9.65e-11,8;UBERON:0010011,9.65e-11,8;UBERON:0000454,9.65e-11,8;UBERON:0002346,1.09e-10,64;UBERON:0003075,1.09e-10,64;UBERON:0007284,1.09e-10,64;UBERON:0003080,3.32e-10,40;UBERON:0002240,2.41e-09,6;UBERON:0005174,2.41e-09,6;UBERON:0001137,2.41e-09,6;UBERON:0002780,7.80e-09,39;UBERON:0001890,7.80e-09,39;UBERON:0006240,7.80e-09,39;UBERON:0010314,8.43e-09,92;UBERON:0002616,1.38e-08,46;UBERON:0004766,1.63e-08,2;UBERON:0008193,1.63e-08,2;UBERON:0005913,1.63e-08,2;UBERON:0011158,1.63e-08,2;UBERON:0005744,1.63e-08,2;UBERON:0003457,1.63e-08,2;UBERON:0008001,1.63e-08,2;UBERON:0007497,1.63e-08,2;UBERON:0009955,1.63e-08,2;UBERON:0003067,1.63e-08,2;UBERON:0002546,1.63e-08,2;UBERON:0007914,1.63e-08,2;UBERON:0005253,1.63e-08,2;UBERON:0002227,1.63e-08,2;UBERON:0001846,1.63e-08,2;UBERON:0004339,1.63e-08,2;UBERON:0002105,1.63e-08,2;UBERON:0001678,1.63e-08,2;UBERON:0003128,1.63e-08,2;UBERON:0001694,1.63e-08,2;UBERON:0004681,1.63e-08,2;UBERON:0001839,1.63e-08,2;UBERON:0001690,1.63e-08,2;UBERON:0001844,1.63e-08,2;UBERON:0001849,1.63e-08,2;UBERON:0002499,1.63e-08,2;UBERON:0001855,1.63e-08,2;UBERON:0011137,1.63e-08,2;UBERON:0001703,1.63e-08,2;UBERON:0010323,1.63e-08,2;UBERON:0003129,1.63e-08,2;UBERON:0003069,1.63e-08,2;UBERON:0003051,1.63e-08,2;UBERON:0004637,1.63e-08,2;UBERON:0004761,1.63e-08,2;UBERON:0010113,1.63e-08,2;UBERON:0009123,1.63e-08,2;UBERON:0010351,1.63e-08,2;UBERON:0009617,1.63e-08,2;UBERON:0005641,1.63e-08,2;UBERON:0010349,1.63e-08,2;UBERON:0000955,2.33e-08,47;UBERON:0006238,2.33e-08,47;UBERON:0002950,4.56e-08,4;UBERON:0001891,4.56e-08,4;UBERON:0009616,4.56e-08,4;UBERON:0010286,4.56e-08,4;UBERON:0003056,6.29e-08,49;UBERON:0002256,8.88e-08,2;UBERON:0000369,7.78e-07,5;UBERON:0002435,7.78e-07,5;UBERON:0000204,7.78e-07,5;UBERON:0010082,7.78e-07,5;UBERON:0002020,8.08e-07,34 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.388859798148567,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0.809265843438391,1.5869729378161,3.80298842103708,0.338844532069132,0,0,0,0,0.599200221036809,2.68952813725088,0.414758449233911,0.270011876663381,0.420649922702764,1.42825492201902,1.76694832761291,0.367472397644862,0.479227355091182,0,1.10115880999389,1.65993539510744,0.46081959976873,2.63772575460388,2.56165402086747,1.04182674111352,0.558365998002762,2.25105044012672,1.22238598221448,1.47314292736834,1.70846016958924,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,5.63373679106722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04853447583376,0,0.125654352112864,0.173824320192276,0,0.41557608911912,0.486723789203273,0,0,0,0,0.780722657776222,0,0.180062129805349,0.150704817835715,0.272145996605311,0,0.0937017245597288,0,0,0,0,0.219195732427575,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140271639780637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,0.35163505977661,0,0,0,0,0,0,0,0,0,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,4.68158844481407,3.88076051348264,1.50035924522115,1.06404140185364,1.60531935841864,0,1.2178597964584,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755393897389701,0,0,0.906284817968409,0,1.86817225651518,1.59609949360412,0.682934423016537,0.972426868273176,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0,0.0640251524048693,0.114870937911227,0.476293691283074,0,0,0,0,0,0,0,0.145346416632329,0.0941093804153306,0.169229215783353,0,0,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.499621155875892,0,0,0,0,0 | |||
|short_description=p12@Sall2 | |||
}} |
Revision as of 02:18, 13 September 2013
Short description: | p12@Sall2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_Sall2_5end |
Coexpression cluster: | NA |
Association with transcript: | 299bp_to_NM_015772, uc007tpf.1_5end |
EntrezGene: | Sall2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.52e-23 | 23 |
neuroblast (sensu Vertebrata) | 5.52e-23 | 23 |
ectodermal cell | 8.92e-20 | 44 |
neurectodermal cell | 8.92e-20 | 44 |
neuron | 5.88e-18 | 33 |
neuronal stem cell | 5.88e-18 | 33 |
neuroblast | 5.88e-18 | 33 |
electrically signaling cell | 5.88e-18 | 33 |
neural cell | 1.20e-17 | 43 |
electrically responsive cell | 8.85e-15 | 39 |
electrically active cell | 8.85e-15 | 39 |
embryonic cell | 3.39e-11 | 70 |
striatum neuron | 4.14e-11 | 3 |
receptor cell | 1.63e-08 | 2 |
auditory epithelial cell | 1.63e-08 | 2 |
sensory epithelial cell | 1.63e-08 | 2 |
neuron of the dorsal spinal cord | 8.88e-08 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.