FFCP PHASE1:Mm9::chr18:38115289..38115299,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=225392|HGNC=|MCL_coexpression_id=20|UniProt=Q8CFT0|association_with_transcript=11bp_to_ENSMUST00000091932_5end|description=CAGE_peak_5_at_Rell2_5end|id=chr18:38115289..38115299,+|ontology_enrichment_celltype=CL:0000117!7.26e-14!23;CL:0000337!7.26e-14!23;CL:0000540!6.78e-08!33;CL:0000047!6.78e-08!33;CL:0000031!6.78e-08!33;CL:0000404!6.78e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-09,23;CL:0000337,1.28e-09,23;CL:0002614,1.17e-08,3;CL:0002612,4.16e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!6.45e-36!52;UBERON:0005068!6.45e-36!52;UBERON:0006241!6.45e-36!52;UBERON:0007135!6.45e-36!52;UBERON:0000955!1.36e-31!50;UBERON:0006238!1.36e-31!50;UBERON:0002616!2.02e-30!49;UBERON:0002020!1.30e-27!34;UBERON:0001017!3.86e-27!73;UBERON:0005743!3.86e-27!73;UBERON:0002346!5.79e-27!71;UBERON:0003075!5.79e-27!71;UBERON:0007284!5.79e-27!71;UBERON:0003080!2.23e-26!40;UBERON:0000073!5.57e-26!75;UBERON:0001016!5.57e-26!75;UBERON:0000033!6.65e-26!63;UBERON:0002780!3.12e-25!39;UBERON:0001890!3.12e-25!39;UBERON:0006240!3.12e-25!39;UBERON:0003056!2.63e-23!49;UBERON:0002791!2.22e-22!29;UBERON:0003528!2.22e-22!29;UBERON:0001893!2.22e-22!29;UBERON:0004121!2.68e-18!102;UBERON:0000924!2.68e-18!102;UBERON:0006601!2.68e-18!102;UBERON:0007811!1.67e-17!86;UBERON:0000956!1.34e-16!21;UBERON:0001869!1.34e-16!21;UBERON:0000203!1.34e-16!21;UBERON:0000153!9.12e-15!94;UBERON:0002619!1.34e-13!17;UBERON:0002021!6.17e-10!10;UBERON:0000411!6.17e-10!10;UBERON:0001950!6.17e-10!10;UBERON:0003076!1.26e-09!12;UBERON:0003057!1.26e-09!12;UBERON:0000025!1.26e-08!114;UBERON:0002298!3.32e-08!6;UBERON:0002240!1.12e-07!6;UBERON:0005174!1.12e-07!6;UBERON:0001137!1.12e-07!6;UBERON:0004111!2.98e-07!122;UBERON:0002420!6.49e-07!8;UBERON:0007245!6.49e-07!8;UBERON:0010009!6.49e-07!8;UBERON:0010011!6.49e-07!8;UBERON:0000454!6.49e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.00e-37,54;UBERON:0001049,8.15e-37,52;UBERON:0005068,8.15e-37,52;UBERON:0006241,8.15e-37,52;UBERON:0007135,8.15e-37,52;UBERON:0001017,3.82e-31,73;UBERON:0002020,8.17e-31,34;UBERON:0001016,3.70e-30,75;UBERON:0002346,7.36e-29,64;UBERON:0003075,7.36e-29,64;UBERON:0007284,7.36e-29,64;UBERON:0000955,5.05e-27,47;UBERON:0006238,5.05e-27,47;UBERON:0002616,4.44e-25,46;UBERON:0010371,1.33e-24,73;UBERON:0004121,1.43e-22,95;UBERON:0000924,1.43e-22,95;UBERON:0006601,1.43e-22,95;UBERON:0002021,1.58e-21,10;UBERON:0000411,1.58e-21,10;UBERON:0001950,1.58e-21,10;UBERON:0003528,5.90e-21,29;UBERON:0002791,5.90e-21,29;UBERON:0001893,5.90e-21,29;UBERON:0003080,6.28e-21,40;UBERON:0002780,4.31e-19,39;UBERON:0001890,4.31e-19,39;UBERON:0006240,4.31e-19,39;UBERON:0010314,2.41e-18,92;UBERON:0003076,1.14e-17,12;UBERON:0003057,1.14e-17,12;UBERON:0003056,2.61e-16,49;UBERON:0002240,1.22e-15,6;UBERON:0005174,1.22e-15,6;UBERON:0001137,1.22e-15,6;UBERON:0002619,8.40e-15,17;UBERON:0000956,4.08e-14,21;UBERON:0001869,4.08e-14,21;UBERON:0000203,4.08e-14,21;UBERON:0000025,1.08e-13,114;UBERON:0001948,8.70e-13,5;UBERON:0002315,8.70e-13,5;UBERON:0004111,2.05e-12,122;UBERON:0002950,3.38e-11,4;UBERON:0001891,3.38e-11,4;UBERON:0009616,3.38e-11,4;UBERON:0010286,3.38e-11,4;UBERON:0002038,1.17e-08,3;UBERON:0009663,1.17e-08,3;UBERON:0009661,1.17e-08,3;UBERON:0000125,1.17e-08,3;UBERON:0002308,1.17e-08,3;UBERON:0002257,4.16e-08,3;UBERON:0002420,4.35e-08,8;UBERON:0007245,4.35e-08,8;UBERON:0010009,4.35e-08,8;UBERON:0010011,4.35e-08,8;UBERON:0000454,4.35e-08,8;UBERON:0011216,6.09e-08,194;UBERON:0001896,2.63e-07,2;UBERON:0002298,2.63e-07,2;UBERON:0005290,2.63e-07,2;UBERON:0010096,2.63e-07,2;UBERON:0000483,5.88e-07,174;UBERON:0000119,8.22e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,1.99955689082663,1.98781686856452,0.244981598429908,0.287536413054709,0.919218786610021,0,2.29837208553338,1.38245879930619,0.395658863190582,0.365950574409639,0,3.90856198601933,1.68828783009504,1.68078072554491,1.47314292736834,1.28134512719193,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,3.97948742945565,0,0,0,0,2.99581278809645,2.28750301409313,1.00523481690292,2.25971616249959,3.58001640262463,3.74018480207208,1.78465389374533,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,5.62616095642575,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.32909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| ||
|EntrezGene=225392 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|UniProt=Q8CFT0 | |||
|association_with_transcript=11bp_to_ENSMUST00000091932_5end | |||
|description=CAGE_peak_5_at_Rell2_5end | |||
|id=chr18:38115289..38115299,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.26e-14!23;CL:0000337!7.26e-14!23;CL:0000540!6.78e-08!33;CL:0000047!6.78e-08!33;CL:0000031!6.78e-08!33;CL:0000404!6.78e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.28e-09,23;CL:0000337,1.28e-09,23;CL:0002614,1.17e-08,3;CL:0002612,4.16e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.45e-36!52;UBERON:0005068!6.45e-36!52;UBERON:0006241!6.45e-36!52;UBERON:0007135!6.45e-36!52;UBERON:0000955!1.36e-31!50;UBERON:0006238!1.36e-31!50;UBERON:0002616!2.02e-30!49;UBERON:0002020!1.30e-27!34;UBERON:0001017!3.86e-27!73;UBERON:0005743!3.86e-27!73;UBERON:0002346!5.79e-27!71;UBERON:0003075!5.79e-27!71;UBERON:0007284!5.79e-27!71;UBERON:0003080!2.23e-26!40;UBERON:0000073!5.57e-26!75;UBERON:0001016!5.57e-26!75;UBERON:0000033!6.65e-26!63;UBERON:0002780!3.12e-25!39;UBERON:0001890!3.12e-25!39;UBERON:0006240!3.12e-25!39;UBERON:0003056!2.63e-23!49;UBERON:0002791!2.22e-22!29;UBERON:0003528!2.22e-22!29;UBERON:0001893!2.22e-22!29;UBERON:0004121!2.68e-18!102;UBERON:0000924!2.68e-18!102;UBERON:0006601!2.68e-18!102;UBERON:0007811!1.67e-17!86;UBERON:0000956!1.34e-16!21;UBERON:0001869!1.34e-16!21;UBERON:0000203!1.34e-16!21;UBERON:0000153!9.12e-15!94;UBERON:0002619!1.34e-13!17;UBERON:0002021!6.17e-10!10;UBERON:0000411!6.17e-10!10;UBERON:0001950!6.17e-10!10;UBERON:0003076!1.26e-09!12;UBERON:0003057!1.26e-09!12;UBERON:0000025!1.26e-08!114;UBERON:0002298!3.32e-08!6;UBERON:0002240!1.12e-07!6;UBERON:0005174!1.12e-07!6;UBERON:0001137!1.12e-07!6;UBERON:0004111!2.98e-07!122;UBERON:0002420!6.49e-07!8;UBERON:0007245!6.49e-07!8;UBERON:0010009!6.49e-07!8;UBERON:0010011!6.49e-07!8;UBERON:0000454!6.49e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.00e-37,54;UBERON:0001049,8.15e-37,52;UBERON:0005068,8.15e-37,52;UBERON:0006241,8.15e-37,52;UBERON:0007135,8.15e-37,52;UBERON:0001017,3.82e-31,73;UBERON:0002020,8.17e-31,34;UBERON:0001016,3.70e-30,75;UBERON:0002346,7.36e-29,64;UBERON:0003075,7.36e-29,64;UBERON:0007284,7.36e-29,64;UBERON:0000955,5.05e-27,47;UBERON:0006238,5.05e-27,47;UBERON:0002616,4.44e-25,46;UBERON:0010371,1.33e-24,73;UBERON:0004121,1.43e-22,95;UBERON:0000924,1.43e-22,95;UBERON:0006601,1.43e-22,95;UBERON:0002021,1.58e-21,10;UBERON:0000411,1.58e-21,10;UBERON:0001950,1.58e-21,10;UBERON:0003528,5.90e-21,29;UBERON:0002791,5.90e-21,29;UBERON:0001893,5.90e-21,29;UBERON:0003080,6.28e-21,40;UBERON:0002780,4.31e-19,39;UBERON:0001890,4.31e-19,39;UBERON:0006240,4.31e-19,39;UBERON:0010314,2.41e-18,92;UBERON:0003076,1.14e-17,12;UBERON:0003057,1.14e-17,12;UBERON:0003056,2.61e-16,49;UBERON:0002240,1.22e-15,6;UBERON:0005174,1.22e-15,6;UBERON:0001137,1.22e-15,6;UBERON:0002619,8.40e-15,17;UBERON:0000956,4.08e-14,21;UBERON:0001869,4.08e-14,21;UBERON:0000203,4.08e-14,21;UBERON:0000025,1.08e-13,114;UBERON:0001948,8.70e-13,5;UBERON:0002315,8.70e-13,5;UBERON:0004111,2.05e-12,122;UBERON:0002950,3.38e-11,4;UBERON:0001891,3.38e-11,4;UBERON:0009616,3.38e-11,4;UBERON:0010286,3.38e-11,4;UBERON:0002038,1.17e-08,3;UBERON:0009663,1.17e-08,3;UBERON:0009661,1.17e-08,3;UBERON:0000125,1.17e-08,3;UBERON:0002308,1.17e-08,3;UBERON:0002257,4.16e-08,3;UBERON:0002420,4.35e-08,8;UBERON:0007245,4.35e-08,8;UBERON:0010009,4.35e-08,8;UBERON:0010011,4.35e-08,8;UBERON:0000454,4.35e-08,8;UBERON:0011216,6.09e-08,194;UBERON:0001896,2.63e-07,2;UBERON:0002298,2.63e-07,2;UBERON:0005290,2.63e-07,2;UBERON:0010096,2.63e-07,2;UBERON:0000483,5.88e-07,174;UBERON:0000119,8.22e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.0797721589953364,0,0.0874204024189974,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0,0,0,0,0,0.207379224616955,0.270011876663381,0.210324961351382,1.99955689082663,1.98781686856452,0.244981598429908,0.287536413054709,0.919218786610021,0,2.29837208553338,1.38245879930619,0.395658863190582,0.365950574409639,0,3.90856198601933,1.68828783009504,1.68078072554491,1.47314292736834,1.28134512719193,1.86399445825301,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,3.97948742945565,0,0,0,0,2.99581278809645,2.28750301409313,1.00523481690292,2.25971616249959,3.58001640262463,3.74018480207208,1.78465389374533,0,0,0,0.420883711772948,0,0,0,0.150704817835715,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10289948564127,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.45872005958493,5.62616095642575,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0.162886959353576,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0.304464949114599,0,0,0,0,0,0,0,0,0,8.90041449650446,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0.203319467126849,0,0,0,0,0,0,0,0,0.56369293868419,0,0.165458490457098,0,0,0,0,0,0.209718688851422,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0.221985953374065,0.0897138566094757,0,0,0.187682475451182,0,0,0,3.3885110557024,3.22227665555024,2.29158205375759,1.71853182343688,4.7955776383945,3.0215755895588,0,1.80128481289688,1.81256963593682,3.62432218226274,0,0,0.170733605754134,0,0.209613162627982,0.183843508450014,0,0,0,0,0.25347929989024,0.188626341386076,0.280924522409647,0.128050304809739,0.229741875822453,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.271608227691724,0,0,0.29551344712669,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0.644613162144895,0,0,0 | |||
|short_description=p5@Rell2 | |||
}} |
Revision as of 16:08, 13 September 2013
Short description: | p5@Rell2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Rell2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 11bp_to_ENSMUST00000091932_5end |
EntrezGene: | Rell2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.28e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.28e-09 | 23 |
neuron of the substantia nigra | 1.17e-08 | 3 |
neuron of the ventral spinal cord | 4.16e-08 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.