FFCP PHASE1:Hg19::chr6:99282438..99282457,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5454|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9215|TSSclassifier=S|UniProt=P20265,B3KTH8|association_with_transcript=-122bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end|coexpression_cluster_id=C2872|description=CAGE_peak_2_at_POU3F2_5end|id=chr6:99282438..99282457,+|ontology_enrichment_celltype=CL:0002319!5.06e-15!25;CL:0000128!3.35e-11!7;CL:0000126!3.35e-11!7;CL:0000127!3.35e-11!7;CL:0002453!3.35e-11!7;CL:0000095!5.64e-11!17;CL:0000123!5.64e-11!17;CL:0000133!3.32e-10!59;CL:0000333!4.62e-10!41;CL:0000243!1.46e-08!15;CL:0000125!1.46e-08!15;CL:0000030!1.46e-08!15;CL:0000339!1.46e-08!15;CL:0000221!2.33e-07!71|ontology_enrichment_celltype_v019=CL:0002319;3.70e-16;25!CL:0000128;2.69e-13;7!CL:0000126;2.69e-13;7!CL:0000127;2.69e-13;7!CL:0000095;1.52e-09;17!CL:0002605;3.96e-09;3|ontology_enrichment_celltype_v019_2=CL:0002319,4.07e-16,25;CL:0000128,3.42e-13,7;CL:0000126,3.42e-13,7;CL:0000127,3.42e-13,7;CL:0002453,3.42e-13,7;CL:0000095,1.66e-09,17;CL:0000123,1.66e-09,17;CL:0000133,1.73e-09,59;CL:0002605,3.92e-09,3;CL:0000047,1.26e-08,8;CL:0000333,2.70e-07,41;CL:0000221,4.85e-07,72|ontology_enrichment_development_v019=UBERON:0006601;8.75e-15;82!UBERON:0006241;8.54e-08;3!UBERON:0003057;8.54e-08;3|ontology_enrichment_disease=DOID:3095!2.03e-08!22;DOID:2994!2.03e-08!22;DOID:171!9.09e-08!10|ontology_enrichment_disease_v019=DOID:171;3.36e-12;10|ontology_enrichment_disease_v019_2=DOID:171,3.46e-12,10|ontology_enrichment_uberon=UBERON:0001017!8.98e-61!82;UBERON:0000073!3.20e-58!94;UBERON:0001016!3.20e-58!94;UBERON:0005743!5.22e-57!86;UBERON:0001049!3.03e-55!57;UBERON:0005068!3.03e-55!57;UBERON:0006241!3.03e-55!57;UBERON:0007135!3.03e-55!57;UBERON:0000955!3.99e-52!69;UBERON:0006238!3.99e-52!69;UBERON:0002616!1.38e-45!59;UBERON:0002780!3.07e-40!41;UBERON:0001890!3.07e-40!41;UBERON:0006240!3.07e-40!41;UBERON:0002020!1.73e-39!34;UBERON:0003528!1.73e-39!34;UBERON:0001893!2.96e-39!34;UBERON:0003080!5.30e-39!42;UBERON:0002346!5.51e-39!90;UBERON:0002791!4.43e-38!33;UBERON:0001869!1.68e-36!32;UBERON:0003075!2.91e-34!86;UBERON:0007284!2.91e-34!86;UBERON:0000924!1.48e-33!173;UBERON:0006601!1.48e-33!173;UBERON:0004121!8.58e-30!169;UBERON:0000956!8.67e-28!25;UBERON:0000203!8.67e-28!25;UBERON:0000033!2.13e-25!123;UBERON:0003056!7.31e-25!61;UBERON:0000153!2.12e-23!129;UBERON:0007811!2.12e-23!129;UBERON:0002619!2.80e-23!22;UBERON:0001950!1.23e-20!20;UBERON:0003076!7.29e-17!15;UBERON:0003057!7.29e-17!15;UBERON:0007023!1.51e-15!115;UBERON:0004732!3.12e-14!13;UBERON:0002308!4.14e-13!9;UBERON:0000125!4.14e-13!9;UBERON:0004733!4.27e-13!12;UBERON:0002028!4.27e-13!12;UBERON:0007277!4.27e-13!12;UBERON:0002680!4.59e-12!9;UBERON:0001895!4.59e-12!9;UBERON:0010092!4.59e-12!9;UBERON:0009663!1.96e-10!7;UBERON:0002420!3.38e-10!9;UBERON:0007245!3.38e-10!9;UBERON:0010009!3.38e-10!9;UBERON:0010011!3.38e-10!9;UBERON:0000454!3.38e-10!9;UBERON:0002021!1.84e-08!5;UBERON:0002037!2.91e-08!6;UBERON:0006215!2.91e-08!6;UBERON:0001872!3.14e-08!5;UBERON:0000025!6.60e-08!194;UBERON:0002298!9.65e-07!8|ontology_enrichment_uberon_v019=UBERON:0001893;1.44e-46;34!UBERON:0003528;5.67e-46;34!UBERON:0002020;5.67e-46;34!UBERON:0002791;1.11e-45;32!UBERON:0001869;1.88e-45;32!UBERON:0002780;5.94e-41;41!UBERON:0001890;5.94e-41;41!UBERON:0000956;8.80e-41;25!UBERON:0000203;8.80e-41;25!UBERON:0000073;7.05e-37;53!UBERON:0002616;7.05e-37;53!UBERON:0002619;1.25e-33;22!UBERON:0001017;1.60e-29;75!UBERON:0001950;2.08e-29;20!UBERON:0001016;5.02e-28;83!UBERON:0000955;1.16e-25;68!UBERON:0000125;7.70e-16;9!UBERON:0002308;7.70e-16;9!UBERON:0004732;6.74e-13;13!UBERON:0002021;1.24e-12;5!UBERON:0002420;4.04e-12;9!UBERON:0007245;4.04e-12;9!UBERON:0010009;4.04e-12;9!UBERON:0010011;4.04e-12;9!UBERON:0000454;4.04e-12;9!UBERON:0001872;5.12e-12;5!UBERON:0009663;9.54e-12;7!UBERON:0004733;3.12e-11;12!UBERON:0002028;3.12e-11;12!UBERON:0002346;1.30e-10;4!UBERON:0000923;1.30e-10;4!UBERON:0010316;1.30e-10;4!UBERON:0005291;1.30e-10;4!UBERON:0002298;1.17e-09;6!UBERON:0011216;1.36e-09;132!UBERON:0002680;7.48e-09;9!UBERON:0001895;7.48e-09;9!UBERON:0002050;1.77e-08;5!UBERON:0005423;1.77e-08;5!UBERON:0000349;5.72e-08;5!UBERON:0002240;8.54e-08;3!UBERON:0005174;8.54e-08;3!UBERON:0001137;8.54e-08;3!UBERON:0000988;1.02e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.80e-80,89;UBERON:0001017,1.20e-76,81;UBERON:0001049,2.48e-71,56;UBERON:0005068,2.48e-71,56;UBERON:0006241,2.48e-71,56;UBERON:0007135,2.48e-71,56;UBERON:0000073,3.73e-65,53;UBERON:0002616,3.73e-65,53;UBERON:0000955,4.15e-62,68;UBERON:0006238,4.15e-62,68;UBERON:0002346,2.74e-57,86;UBERON:0003528,5.89e-56,34;UBERON:0002020,5.89e-56,34;UBERON:0001893,1.33e-55,34;UBERON:0002780,4.52e-55,41;UBERON:0001890,4.52e-55,41;UBERON:0003080,4.52e-55,41;UBERON:0006240,4.52e-55,41;UBERON:0002791,1.32e-51,32;UBERON:0001869,3.08e-51,32;UBERON:0003075,8.35e-50,82;UBERON:0007284,8.35e-50,82;UBERON:0004121,9.80e-49,171;UBERON:0000924,9.80e-49,171;UBERON:0006601,9.80e-49,171;UBERON:0010371,5.25e-43,1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42959,0,0,0,0,0.504665699340316,0.109265571963696,0.126698501011437,0.101988829741982,0,0.551369397209069,0,0,0,3.31667775783512,3.41328886344254,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0|short_description=p2@POU3F2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5454 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9215 | |||
|TSSclassifier=S | |||
|UniProt=P20265,B3KTH8 | |||
|association_with_transcript=-122bp_to_ENST00000328345,NM_005604,uc003ppe.2_5end | |||
|coexpression_cluster_id=C2872 | |||
|description=CAGE_peak_2_at_POU3F2_5end | |||
|id=chr6:99282438..99282457,+ | |||
|ontology_enrichment_celltype=CL:0002319!5.06e-15!25;CL:0000128!3.35e-11!7;CL:0000126!3.35e-11!7;CL:0000127!3.35e-11!7;CL:0002453!3.35e-11!7;CL:0000095!5.64e-11!17;CL:0000123!5.64e-11!17;CL:0000133!3.32e-10!59;CL:0000333!4.62e-10!41;CL:0000243!1.46e-08!15;CL:0000125!1.46e-08!15;CL:0000030!1.46e-08!15;CL:0000339!1.46e-08!15;CL:0000221!2.33e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;3.70e-16;25!CL:0000128;2.69e-13;7!CL:0000126;2.69e-13;7!CL:0000127;2.69e-13;7!CL:0000095;1.52e-09;17!CL:0002605;3.96e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.07e-16,25;CL:0000128,3.42e-13,7;CL:0000126,3.42e-13,7;CL:0000127,3.42e-13,7;CL:0002453,3.42e-13,7;CL:0000095,1.66e-09,17;CL:0000123,1.66e-09,17;CL:0000133,1.73e-09,59;CL:0002605,3.92e-09,3;CL:0000047,1.26e-08,8;CL:0000333,2.70e-07,41;CL:0000221,4.85e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;8.75e-15;82!UBERON:0006241;8.54e-08;3!UBERON:0003057;8.54e-08;3 | |||
|ontology_enrichment_disease=DOID:3095!2.03e-08!22;DOID:2994!2.03e-08!22;DOID:171!9.09e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;3.36e-12;10 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.46e-12,10 | |||
|ontology_enrichment_uberon=UBERON:0001017!8.98e-61!82;UBERON:0000073!3.20e-58!94;UBERON:0001016!3.20e-58!94;UBERON:0005743!5.22e-57!86;UBERON:0001049!3.03e-55!57;UBERON:0005068!3.03e-55!57;UBERON:0006241!3.03e-55!57;UBERON:0007135!3.03e-55!57;UBERON:0000955!3.99e-52!69;UBERON:0006238!3.99e-52!69;UBERON:0002616!1.38e-45!59;UBERON:0002780!3.07e-40!41;UBERON:0001890!3.07e-40!41;UBERON:0006240!3.07e-40!41;UBERON:0002020!1.73e-39!34;UBERON:0003528!1.73e-39!34;UBERON:0001893!2.96e-39!34;UBERON:0003080!5.30e-39!42;UBERON:0002346!5.51e-39!90;UBERON:0002791!4.43e-38!33;UBERON:0001869!1.68e-36!32;UBERON:0003075!2.91e-34!86;UBERON:0007284!2.91e-34!86;UBERON:0000924!1.48e-33!173;UBERON:0006601!1.48e-33!173;UBERON:0004121!8.58e-30!169;UBERON:0000956!8.67e-28!25;UBERON:0000203!8.67e-28!25;UBERON:0000033!2.13e-25!123;UBERON:0003056!7.31e-25!61;UBERON:0000153!2.12e-23!129;UBERON:0007811!2.12e-23!129;UBERON:0002619!2.80e-23!22;UBERON:0001950!1.23e-20!20;UBERON:0003076!7.29e-17!15;UBERON:0003057!7.29e-17!15;UBERON:0007023!1.51e-15!115;UBERON:0004732!3.12e-14!13;UBERON:0002308!4.14e-13!9;UBERON:0000125!4.14e-13!9;UBERON:0004733!4.27e-13!12;UBERON:0002028!4.27e-13!12;UBERON:0007277!4.27e-13!12;UBERON:0002680!4.59e-12!9;UBERON:0001895!4.59e-12!9;UBERON:0010092!4.59e-12!9;UBERON:0009663!1.96e-10!7;UBERON:0002420!3.38e-10!9;UBERON:0007245!3.38e-10!9;UBERON:0010009!3.38e-10!9;UBERON:0010011!3.38e-10!9;UBERON:0000454!3.38e-10!9;UBERON:0002021!1.84e-08!5;UBERON:0002037!2.91e-08!6;UBERON:0006215!2.91e-08!6;UBERON:0001872!3.14e-08!5;UBERON:0000025!6.60e-08!194;UBERON:0002298!9.65e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.44e-46;34!UBERON:0003528;5.67e-46;34!UBERON:0002020;5.67e-46;34!UBERON:0002791;1.11e-45;32!UBERON:0001869;1.88e-45;32!UBERON:0002780;5.94e-41;41!UBERON:0001890;5.94e-41;41!UBERON:0000956;8.80e-41;25!UBERON:0000203;8.80e-41;25!UBERON:0000073;7.05e-37;53!UBERON:0002616;7.05e-37;53!UBERON:0002619;1.25e-33;22!UBERON:0001017;1.60e-29;75!UBERON:0001950;2.08e-29;20!UBERON:0001016;5.02e-28;83!UBERON:0000955;1.16e-25;68!UBERON:0000125;7.70e-16;9!UBERON:0002308;7.70e-16;9!UBERON:0004732;6.74e-13;13!UBERON:0002021;1.24e-12;5!UBERON:0002420;4.04e-12;9!UBERON:0007245;4.04e-12;9!UBERON:0010009;4.04e-12;9!UBERON:0010011;4.04e-12;9!UBERON:0000454;4.04e-12;9!UBERON:0001872;5.12e-12;5!UBERON:0009663;9.54e-12;7!UBERON:0004733;3.12e-11;12!UBERON:0002028;3.12e-11;12!UBERON:0002346;1.30e-10;4!UBERON:0000923;1.30e-10;4!UBERON:0010316;1.30e-10;4!UBERON:0005291;1.30e-10;4!UBERON:0002298;1.17e-09;6!UBERON:0011216;1.36e-09;132!UBERON:0002680;7.48e-09;9!UBERON:0001895;7.48e-09;9!UBERON:0002050;1.77e-08;5!UBERON:0005423;1.77e-08;5!UBERON:0000349;5.72e-08;5!UBERON:0002240;8.54e-08;3!UBERON:0005174;8.54e-08;3!UBERON:0001137;8.54e-08;3!UBERON:0000988;1.02e-07;3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23121058076788,0.408001382488506,3.13454721478088,18.3191031763876,11.3605772810494,11.5499228427219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0.243947412259191,0,0.348581828608555,3.00617059544574,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0,0.110293972732394,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,4.41463099414651,0,0,0,0,0,0,0,0,0,2.55046890945169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0.822619941626588,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.86055485400651,14.3153839243384,17.785642693887,17.5892078601066,13.3967137847164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0.278406173895242,2.46174797895425,0,0,0,0,0.146508179271894,0,0,0.568272293612826,0,0.296964680832639,0,0,2.39138007897872,0,1.81284261649436,0,0,0,2.51932747854276,16.5675265653491,0,0,0,0,0,0,0,0,5.81599647657131,1.48428957058962,7.98455192004777,0,0,0,0,0,0,5.51589397186343,21.5787413903608,0.173624994933292,0.885741385813839,3.13550740426061,1.52581736317083,0.884634079449797,0.591095237907095,1.09692698576986,0.544692317594951,0,0,0,0,0.179515288819544,0,0,0,0,0,0.156980256395025,0,0,0.19606253431774,0,0.569261198172555,0,0,0,0,0,0,0,0,0,0,0.104421949505455,2.69604531922708,0,0.937057782901357,0,0,0,0,0,11.0186194186976,0,0.150323419414493,1.45163467956146,0,0,0,0,0,0,0,0,0,0,0,0,0.219267951258557,0.328461828212837,0,0,0.225980740780532,0.685209623233754,0,1.83601308272048,0,0,0,0,0,0.229073192331831,2.74551996579143,0,0.124252535565433,0,0.543616824294456,0.104602846312333,0,0,1.80126086612937,3.55953985119182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.38568906942791,4.35850899557042,0,0,0,0,0,1.94398581305679,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93924434542326,5.2893040697076,0,0,0,0,0,0,0,0,0,0,0,0,0,9.58029987126429,0,0.854183854313742,4.00610978260799,0,2.66229723688445,1.80079568530012,1.798532254171,0.124980407962107,2.72968411574966,0.570930667089935,0,6.08835377548946,12.463208460531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.489473409012935,0.358177682162975,0,0,0,0,0,0,0,0,2.07387654227596,0,0,0,0,0,0,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0,36.485698510568,3.05786986937639,2.88545300921843,3.18862380152524,6.44465974146811,36.8705645862341,0,0,0,0,0,1.66995985250795,4.25089728976755,4.78901577171454,1.64093091392604,12.6035848110859,2.21303207885497,1.93770774758221,1.42769420259154,0,0,0,0,0,1.3807198521202,0,0.0752103283492573,0.60511520611056,0,0,0.163771917510097,0,1.41828927698629,1.56215619722769,4.96048311602842,1.71222687523548,15.8622694615284,0,0,4.04503862027127,0,0,1.00885116665647,0,0,0,0,0,1.42736439251347,1.97318320688547,0,0.222462803784138,0,1.88538707899202,0.280272163313789,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0.397901550322736,0.118920090777569,6.88971100437656,1.31928620094515,0,0,0,0,0,0,1.37415926980462,3.26751040359795,2.9585900930838,0,0,0,0,0,0,0,0,0,3.44014999563483,1.10440093535229,1.22384682343646,18.3267289942959,0,0,0,0,0.504665699340316,0.109265571963696,0.126698501011437,0.101988829741982,0,0.551369397209069,0,0,0,3.31667775783512,3.41328886344254,0,0,0,0,1.12131862580613,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |||
|short_description=p2@POU3F2 | |||
}} |
Revision as of 22:12, 13 September 2013
Short description: | p2@POU3F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_POU3F2_5end |
Coexpression cluster: | C2872_neuroepithelioma_neuroblastoma_Astrocyte_Neurons_carcinoid_astrocytoma_Neural |
Association with transcript: | -122bp_to_ENST00000328345, NM_005604, uc003ppe.2_5end |
EntrezGene: | POU3F2 |
HGNC: | 9215 |
UniProt: | P20265B3KTH8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.07e-16 | 25 |
oligodendrocyte | 3.42e-13 | 7 |
macroglial cell | 3.42e-13 | 7 |
astrocyte | 3.42e-13 | 7 |
oligodendrocyte precursor cell | 3.42e-13 | 7 |
neuron associated cell | 1.66e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.66e-09 | 17 |
neurectodermal cell | 1.73e-09 | 59 |
astrocyte of the cerebral cortex | 3.92e-09 | 3 |
neuronal stem cell | 1.26e-08 | 8 |
migratory neural crest cell | 2.70e-07 | 41 |
ectodermal cell | 4.85e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.46e-12 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.