FFCP PHASE1:Mm9::chr5:98615731..98615746,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=3532|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr5:98615731..98615746,+|id=chr5:98615731..98615746,+|ontology_enrichment_celltype=CL:0000117!7.19e-14!23;CL:0000337!7.19e-14!23;CL:0000540!6.02e-08!33;CL:0000047!6.02e-08!33;CL:0000031!6.02e-08!33;CL:0000404!6.02e-08!33;CL:0002609!8.68e-07!6|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-20,23;CL:0000337,9.45e-20,23;CL:0002609,1.86e-12,6;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0000393,6.72e-10,39;CL:0000211,6.72e-10,39;CL:0002319,1.33e-08,43;CL:0000221,2.58e-08,44;CL:0000133,2.58e-08,44;CL:0002608,8.40e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!3.11e-20!34;UBERON:0000033!1.85e-17!63;UBERON:0001049!4.74e-17!52;UBERON:0005068!4.74e-17!52;UBERON:0006241!4.74e-17!52;UBERON:0007135!4.74e-17!52;UBERON:0002791!5.73e-17!29;UBERON:0003528!5.73e-17!29;UBERON:0001893!5.73e-17!29;UBERON:0003056!3.01e-16!49;UBERON:0002616!1.75e-15!49;UBERON:0000956!2.22e-15!21;UBERON:0001869!2.22e-15!21;UBERON:0000203!2.22e-15!21;UBERON:0002346!5.85e-15!71;UBERON:0003075!5.85e-15!71;UBERON:0007284!5.85e-15!71;UBERON:0000955!6.79e-15!50;UBERON:0006238!6.79e-15!50;UBERON:0000073!4.10e-14!75;UBERON:0001016!4.10e-14!75;UBERON:0001017!1.05e-13!73;UBERON:0005743!1.05e-13!73;UBERON:0003080!3.28e-13!40;UBERON:0002780!7.06e-13!39;UBERON:0001890!7.06e-13!39;UBERON:0006240!7.06e-13!39;UBERON:0004121!2.01e-12!102;UBERON:0000924!2.01e-12!102;UBERON:0006601!2.01e-12!102;UBERON:0002619!5.77e-12!17;UBERON:0002021!3.89e-10!10;UBERON:0000411!3.89e-10!10;UBERON:0001950!3.89e-10!10;UBERON:0007811!5.05e-09!86;UBERON:0000025!2.82e-08!114;UBERON:0002048!4.60e-08!14;UBERON:0000117!4.60e-08!14;UBERON:0000171!4.60e-08!14;UBERON:0000170!4.60e-08!14;UBERON:0005597!4.60e-08!14;UBERON:0000118!4.60e-08!14;UBERON:0004111!7.14e-08!122;UBERON:0000153!1.53e-07!94|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-34,34;UBERON:0000956,9.02e-32,21;UBERON:0001869,9.02e-32,21;UBERON:0000203,9.02e-32,21;UBERON:0003528,3.95e-29,29;UBERON:0002791,3.95e-29,29;UBERON:0001893,3.95e-29,29;UBERON:0000073,1.51e-25,54;UBERON:0002619,1.42e-24,17;UBERON:0002346,4.37e-24,64;UBERON:0003075,4.37e-24,64;UBERON:0007284,4.37e-24,64;UBERON:0003056,1.84e-23,49;UBERON:0001049,1.89e-21,52;UBERON:0005068,1.89e-21,52;UBERON:0006241,1.89e-21,52;UBERON:0007135,1.89e-21,52;UBERON:0010371,4.27e-20,73;UBERON:0002780,4.29e-20,39;UBERON:0001890,4.29e-20,39;UBERON:0006240,4.29e-20,39;UBERON:0003080,1.93e-19,40;UBERON:0002021,2.05e-19,10;UBERON:0000411,2.05e-19,10;UBERON:0001950,2.05e-19,10;UBERON:0001017,2.86e-18,73;UBERON:0004121,3.81e-18,95;UBERON:0000924,3.81e-18,95;UBERON:0006601,3.81e-18,95;UBERON:0002616,1.21e-17,46;UBERON:0001016,1.43e-17,75;UBERON:0000955,3.89e-17,47;UBERON:0006238,3.89e-17,47;UBERON:0010314,2.96e-14,92;UBERON:0000025,7.63e-13,114;UBERON:0004111,1.95e-11,122;UBERON:0000483,7.51e-09,174;UBERON:0000119,1.21e-08,176;UBERON:0001954,2.97e-07,7;UBERON:0003022,2.97e-07,7;UBERON:0002421,2.97e-07,7;UBERON:0000349,2.97e-07,7;UBERON:0002600,2.97e-07,7;UBERON:0002048,3.27e-07,14;UBERON:0000117,3.27e-07,14;UBERON:0000171,3.27e-07,14;UBERON:0000170,3.27e-07,14;UBERON:0005597,3.27e-07,14;UBERON:0000118,3.27e-07,14|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,3.31806759387129,5.67024940993101,3.78584930432488,1.71390590642282,0.220868540951614,2.08234358665422,2.87536413054709,3.67687514644008,1.10115880999389,1.40456071893706,1.0752457327937,0.791317726381163,1.55528994124096,1.56274011167028,0,0,1.83357897332172,1.17851434189467,1.85083185038834,2.23679334990361,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.647067399789637,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.299581278809645,0.457500602818626,0.628271760564322,1.39059456153821,1.53429274398198,0.62336413367868,0.973447578406546,0.305518091550949,0,0,1.26265113531884,0.260240885925407,0,0,0.60281927134286,1.29269348387523,2.43416068541215,1.40552586839593,5.95017752699736,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,1.89260953707715,8.02655976558419,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.678980343100753,0.704070744865506,1.00503754465089,0.952174563544055,1.75620283072019,3.15270288212382,1.55025282754142,3.34855014180723,2.78567635016755,2.07221978239075,1.01254341007058,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,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| ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=3532 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr5:98615731..98615746,+ | |||
|id=chr5:98615731..98615746,+ | |||
|ontology_enrichment_celltype=CL:0000117!7.19e-14!23;CL:0000337!7.19e-14!23;CL:0000540!6.02e-08!33;CL:0000047!6.02e-08!33;CL:0000031!6.02e-08!33;CL:0000404!6.02e-08!33;CL:0002609!8.68e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.45e-20,23;CL:0000337,9.45e-20,23;CL:0002609,1.86e-12,6;CL:0000540,1.86e-12,33;CL:0000047,1.86e-12,33;CL:0000031,1.86e-12,33;CL:0000404,1.86e-12,33;CL:0000393,6.72e-10,39;CL:0000211,6.72e-10,39;CL:0002319,1.33e-08,43;CL:0000221,2.58e-08,44;CL:0000133,2.58e-08,44;CL:0002608,8.40e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!3.11e-20!34;UBERON:0000033!1.85e-17!63;UBERON:0001049!4.74e-17!52;UBERON:0005068!4.74e-17!52;UBERON:0006241!4.74e-17!52;UBERON:0007135!4.74e-17!52;UBERON:0002791!5.73e-17!29;UBERON:0003528!5.73e-17!29;UBERON:0001893!5.73e-17!29;UBERON:0003056!3.01e-16!49;UBERON:0002616!1.75e-15!49;UBERON:0000956!2.22e-15!21;UBERON:0001869!2.22e-15!21;UBERON:0000203!2.22e-15!21;UBERON:0002346!5.85e-15!71;UBERON:0003075!5.85e-15!71;UBERON:0007284!5.85e-15!71;UBERON:0000955!6.79e-15!50;UBERON:0006238!6.79e-15!50;UBERON:0000073!4.10e-14!75;UBERON:0001016!4.10e-14!75;UBERON:0001017!1.05e-13!73;UBERON:0005743!1.05e-13!73;UBERON:0003080!3.28e-13!40;UBERON:0002780!7.06e-13!39;UBERON:0001890!7.06e-13!39;UBERON:0006240!7.06e-13!39;UBERON:0004121!2.01e-12!102;UBERON:0000924!2.01e-12!102;UBERON:0006601!2.01e-12!102;UBERON:0002619!5.77e-12!17;UBERON:0002021!3.89e-10!10;UBERON:0000411!3.89e-10!10;UBERON:0001950!3.89e-10!10;UBERON:0007811!5.05e-09!86;UBERON:0000025!2.82e-08!114;UBERON:0002048!4.60e-08!14;UBERON:0000117!4.60e-08!14;UBERON:0000171!4.60e-08!14;UBERON:0000170!4.60e-08!14;UBERON:0005597!4.60e-08!14;UBERON:0000118!4.60e-08!14;UBERON:0004111!7.14e-08!122;UBERON:0000153!1.53e-07!94 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.32e-34,34;UBERON:0000956,9.02e-32,21;UBERON:0001869,9.02e-32,21;UBERON:0000203,9.02e-32,21;UBERON:0003528,3.95e-29,29;UBERON:0002791,3.95e-29,29;UBERON:0001893,3.95e-29,29;UBERON:0000073,1.51e-25,54;UBERON:0002619,1.42e-24,17;UBERON:0002346,4.37e-24,64;UBERON:0003075,4.37e-24,64;UBERON:0007284,4.37e-24,64;UBERON:0003056,1.84e-23,49;UBERON:0001049,1.89e-21,52;UBERON:0005068,1.89e-21,52;UBERON:0006241,1.89e-21,52;UBERON:0007135,1.89e-21,52;UBERON:0010371,4.27e-20,73;UBERON:0002780,4.29e-20,39;UBERON:0001890,4.29e-20,39;UBERON:0006240,4.29e-20,39;UBERON:0003080,1.93e-19,40;UBERON:0002021,2.05e-19,10;UBERON:0000411,2.05e-19,10;UBERON:0001950,2.05e-19,10;UBERON:0001017,2.86e-18,73;UBERON:0004121,3.81e-18,95;UBERON:0000924,3.81e-18,95;UBERON:0006601,3.81e-18,95;UBERON:0002616,1.21e-17,46;UBERON:0001016,1.43e-17,75;UBERON:0000955,3.89e-17,47;UBERON:0006238,3.89e-17,47;UBERON:0010314,2.96e-14,92;UBERON:0000025,7.63e-13,114;UBERON:0004111,1.95e-11,122;UBERON:0000483,7.51e-09,174;UBERON:0000119,1.21e-08,176;UBERON:0001954,2.97e-07,7;UBERON:0003022,2.97e-07,7;UBERON:0002421,2.97e-07,7;UBERON:0000349,2.97e-07,7;UBERON:0002600,2.97e-07,7;UBERON:0002048,3.27e-07,14;UBERON:0000117,3.27e-07,14;UBERON:0000171,3.27e-07,14;UBERON:0000170,3.27e-07,14;UBERON:0005597,3.27e-07,14;UBERON:0000118,3.27e-07,14 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.809265843438391,1.5869729378161,0.633831403506179,0,0,0,0,0,0,0,3.31806759387129,5.67024940993101,3.78584930432488,1.71390590642282,0.220868540951614,2.08234358665422,2.87536413054709,3.67687514644008,1.10115880999389,1.40456071893706,1.0752457327937,0.791317726381163,1.55528994124096,1.56274011167028,0,0,1.83357897332172,1.17851434189467,1.85083185038834,2.23679334990361,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0.647067399789637,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.299581278809645,0.457500602818626,0.628271760564322,1.39059456153821,1.53429274398198,0.62336413367868,0.973447578406546,0.305518091550949,0,0,1.26265113531884,0.260240885925407,0,0,0.60281927134286,1.29269348387523,2.43416068541215,1.40552586839593,5.95017752699736,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0.134206418760372,1.89260953707715,8.02655976558419,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0.678980343100753,0.704070744865506,1.00503754465089,0.952174563544055,1.75620283072019,3.15270288212382,1.55025282754142,3.34855014180723,2.78567635016755,2.07221978239075,1.01254341007058,0,0,0,0,0.160550589987792,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,0,0,0.185194527369712,0,0,0,0.169978429993855,0,0.138199973804424,0,0,0,0,0,0.218362563746178,0.134864346384821,0,0,0,0,3.38215763210514,0,0,0.194451188344048,0,0.168956125490778,0,0.13020438484395,0,0.966336483304024,0.576060012515731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116876902181569,0.226730383615211,0,0.0897138566094757,0,0,0,0,0.214368379079066,0,9.60078132449013,3.68260189205742,7.44764167471216,3.26521046453006,1.37016503954128,4.5323633843382,2.02506750069542,2.70192721934532,4.07828168085784,2.5888015587591,0.415149390336707,0.798049746802062,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.824140228955577,0.962757628775446,0.505394423527595,0.760437899670719,0.377252682772152,0.280924522409647,0.384150914429216,0.114870937911227,0,0.463537303779422,0,0,0.441596760403192,0,1.06485483695602,0.238436189947321,0.436039249896986,0.564656282491984,0.25384382367503,0.548783918618318,0.263069711437843,0.543216455383447,2.24456908663095,0.355905054372522,0.29551344712669,0.409231043169689,0.619747364743864,0,1.49886346762768,0,0.429742108096597,0.382576664137687,0.441182838239031,0 | |||
|short_description=p@chr5:98615731..98615746,+ | |||
}} |
Revision as of 08:24, 14 September 2013
Short description: | p@chr5:98615731..98615746, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:98615731..98615746, + |
Coexpression cluster: | MCL_coexpression_mm9:3532 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.45e-20 | 23 |
neuroblast (sensu Vertebrata) | 9.45e-20 | 23 |
neuron of cerebral cortex | 1.86e-12 | 6 |
neuron | 1.86e-12 | 33 |
neuronal stem cell | 1.86e-12 | 33 |
neuroblast | 1.86e-12 | 33 |
electrically signaling cell | 1.86e-12 | 33 |
electrically responsive cell | 6.72e-10 | 39 |
electrically active cell | 6.72e-10 | 39 |
neural cell | 1.33e-08 | 43 |
ectodermal cell | 2.58e-08 | 44 |
neurectodermal cell | 2.58e-08 | 44 |
hippocampal neuron | 8.40e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.