FFCP PHASE1:Hg19::chr11:31832687..31832704,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5080 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8620 | |||
|TSSclassifier=strong | |||
|UniProt=B1B1I8 | |||
|association_with_transcript=-2bp_to_ENST00000438681_5end | |||
|coexpression_cluster_id=C798 | |||
|description=CAGE_peak_6_at_PAX6_5end | |||
|id=chr11:31832687..31832704,- | |||
|ontology_enrichment_celltype=CL:0002319!5.12e-11!25;CL:0000095!6.63e-09!17;CL:0000123!6.63e-09!17;CL:0000133!1.13e-07!59;CL:0000243!1.90e-07!15;CL:0000125!1.90e-07!15;CL:0000030!1.90e-07!15;CL:0000339!1.90e-07!15;CL:0000128!2.70e-07!7;CL:0000126!2.70e-07!7;CL:0000127!2.70e-07!7;CL:0002453!2.70e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;4.51e-10;25!CL:0000128;5.25e-08;7!CL:0000126;5.25e-08;7!CL:0000127;5.25e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.94e-10,25;CL:0000128,4.48e-08,7;CL:0000126,4.48e-08,7;CL:0000127,4.48e-08,7;CL:0002453,4.48e-08,7;CL:0000133,4.24e-07,59 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.98e-10;82!UBERON:0006215;6.59e-07;3 | |||
|ontology_enrichment_disease=DOID:0050687!5.66e-14!143;DOID:14566!7.46e-11!239;DOID:162!1.26e-10!235;DOID:305!7.81e-10!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.13e-51!94;UBERON:0001016!2.13e-51!94;UBERON:0005743!1.65e-49!86;UBERON:0001049!3.52e-48!57;UBERON:0005068!3.52e-48!57;UBERON:0006241!3.52e-48!57;UBERON:0007135!3.52e-48!57;UBERON:0002346!5.34e-48!90;UBERON:0003075!5.44e-47!86;UBERON:0007284!5.44e-47!86;UBERON:0001017!5.03e-46!82;UBERON:0002616!7.86e-41!59;UBERON:0000955!1.10e-40!69;UBERON:0006238!1.10e-40!69;UBERON:0003056!1.13e-38!61;UBERON:0002780!1.34e-34!41;UBERON:0001890!1.34e-34!41;UBERON:0006240!1.34e-34!41;UBERON:0003080!2.09e-33!42;UBERON:0002020!2.92e-31!34;UBERON:0003528!2.92e-31!34;UBERON:0001893!6.79e-31!34;UBERON:0000033!8.42e-31!123;UBERON:0002791!3.56e-30!33;UBERON:0000924!1.03e-29!173;UBERON:0006601!1.03e-29!173;UBERON:0001869!3.02e-29!32;UBERON:0000153!7.08e-29!129;UBERON:0007811!7.08e-29!129;UBERON:0004121!1.57e-28!169;UBERON:0000956!7.09e-23!25;UBERON:0000203!7.09e-23!25;UBERON:0002619!6.97e-20!22;UBERON:0001950!6.69e-18!20;UBERON:0003076!1.33e-15!15;UBERON:0003057!1.33e-15!15;UBERON:0004733!1.72e-12!12;UBERON:0002028!1.72e-12!12;UBERON:0007277!1.72e-12!12;UBERON:0004732!3.33e-11!13;UBERON:0007023!3.37e-10!115;UBERON:0002308!8.69e-10!9;UBERON:0000125!8.69e-10!9;UBERON:0002680!1.82e-09!9;UBERON:0001895!1.82e-09!9;UBERON:0010092!1.82e-09!9;UBERON:0002420!1.96e-09!9;UBERON:0007245!1.96e-09!9;UBERON:0010009!1.96e-09!9;UBERON:0010011!1.96e-09!9;UBERON:0000454!1.96e-09!9;UBERON:0007625!2.07e-09!11;UBERON:0000025!1.26e-08!194;UBERON:0000475!2.45e-08!365;UBERON:0000970!4.76e-08!20;UBERON:0009663!6.74e-08!7;UBERON:0000064!7.15e-08!219;UBERON:0001871!8.05e-08!7;UBERON:0002104!1.86e-07!21;UBERON:0000019!2.43e-07!19;UBERON:0000047!2.43e-07!19;UBERON:0004088!2.43e-07!19;UBERON:0003072!2.43e-07!19;UBERON:0003071!2.43e-07!19;UBERON:0004128!2.43e-07!19;UBERON:0000483!4.24e-07!309;UBERON:0002037!5.27e-07!6;UBERON:0006215!5.27e-07!6;UBERON:0000119!8.27e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;5.54e-34;34!UBERON:0003528;6.33e-34;34!UBERON:0002020;6.33e-34;34!UBERON:0002791;9.81e-34;32!UBERON:0001869;5.12e-33;32!UBERON:0000073;4.10e-32;53!UBERON:0002616;4.10e-32;53!UBERON:0002780;1.72e-30;41!UBERON:0001890;1.72e-30;41!UBERON:0000956;4.03e-27;25!UBERON:0000203;4.03e-27;25!UBERON:0002619;1.11e-22;22!UBERON:0001017;2.95e-22;75!UBERON:0000955;4.11e-21;68!UBERON:0001016;2.87e-20;83!UBERON:0001950;8.30e-20;20!UBERON:0004733;5.44e-16;12!UBERON:0002028;5.44e-16;12!UBERON:0004732;1.58e-14;13!UBERON:0000125;3.62e-14;9!UBERON:0002308;3.62e-14;9!UBERON:0002420;1.57e-13;9!UBERON:0007245;1.57e-13;9!UBERON:0010009;1.57e-13;9!UBERON:0010011;1.57e-13;9!UBERON:0000454;1.57e-13;9!UBERON:0007625;7.85e-12;11!UBERON:0002680;2.25e-11;9!UBERON:0001895;2.25e-11;9!UBERON:0009663;2.91e-11;7!UBERON:0002298;2.86e-10;6!UBERON:0000970;6.98e-10;20!UBERON:0000200;2.58e-09;6!UBERON:0002104;2.90e-09;21!UBERON:0000019;7.53e-09;19!UBERON:0000047;7.53e-09;19!UBERON:0004088;7.53e-09;19!UBERON:0010230;7.53e-09;19!UBERON:0011216;1.92e-08;132!UBERON:0000020;3.41e-08;23!UBERON:0000349;3.53e-08;5!UBERON:0000488;6.27e-08;4!UBERON:0001456;9.51e-08;21!UBERON:0001032;9.96e-08;24!UBERON:0004456;9.96e-08;24!UBERON:0002784;1.39e-07;4!UBERON:0001871;1.67e-07;6!UBERON:0002037;1.70e-07;6!UBERON:0010314;1.82e-07;132!UBERON:0000369;4.72e-07;4!UBERON:0002435;4.72e-07;4!UBERON:0000204;4.72e-07;4!UBERON:0007023;8.81e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,4.40e-64,56;UBERON:0005068,4.40e-64,56;UBERON:0006241,4.40e-64,56;UBERON:0007135,4.40e-64,56;UBERON:0003075,9.93e-63,82;UBERON:0007284,9.93e-63,82;UBERON:0002346,6.94e-61,86;UBERON:0001016,1.02e-59,89;UBERON:0000073,4.28e-59,53;UBERON:0002616,4.28e-59,53;UBERON:0001017,2.01e-57,81;UBERON:0003056,3.20e-49,61;UBERON:0010371,5.47e-49,104;UBERON:0000955,3.92e-48,68;UBERON:0006238,3.92e-48,68;UBERON:0002780,5.68e-44,41;UBERON:0001890,5.68e-44,41;UBERON:0003080,5.68e-44,41;UBERON:0006240,5.68e-44,41;UBERON:0003528,3.36e-40,34;UBERON:0002020,3.36e-40,34;UBERON:0001893,1.12e-39,34;UBERON:0004121,4.57e-39,171;UBERON:0000924,4.57e-39,171;UBERON:0006601,4.57e-39,171;UBERON:0002791,3.06e-37,32;UBERON:0001869,3.79e-37,32;UBERON:0010314,9.24e-36,132;UBERON:0000956,1.76e-27,25;UBERON:0000203,1.76e-27,25;UBERON:0002619,5.10e-23,22;UBERON:0011216,1.21e-21,223;UBERON:0003076,1.25e-20,15;UBERON:0003057,1.25e-20,15;UBERON:0001950,4.34e-20,20;UBERON:0007023,5.09e-19,114;UBERON:0004733,7.01e-16,12;UBERON:0002028,7.01e-16,12;UBERON:0007277,7.01e-16,12;UBERON:0004732,2.00e-14,13;UBERON:0000125,3.04e-14,9;UBERON:0002308,3.04e-14,9;UBERON:0002420,1.06e-13,9;UBERON:0007245,1.06e-13,9;UBERON:0010009,1.06e-13,9;UBERON:0010011,1.06e-13,9;UBERON:0000454,1.06e-13,9;UBERON:0000025,7.88e-13,192;UBERON:0007625,7.33e-12,11;UBERON:0009663,2.46e-11,7;UBERON:0002680,2.70e-11,9;UBERON:0001895,2.70e-11,9;UBERON:0010092,2.70e-11,9;UBERON:0000483,4.91e-11,306;UBERON:0000119,9.58e-11,309;UBERON:0002298,4.11e-10,6;UBERON:0000200,2.10e-09,6;UBERON:0000970,3.00e-09,21;UBERON:0002104,3.00e-09,21;UBERON:0000019,2.94e-08,20;UBERON:0000047,2.94e-08,20;UBERON:0010312,2.94e-08,20;UBERON:0004088,2.94e-08,20;UBERON:0010230,2.94e-08,20;UBERON:0003072,2.94e-08,20;UBERON:0004128,2.94e-08,20;UBERON:0003071,2.94e-08,20;UBERON:0000349,2.96e-08,5;UBERON:0000488,6.04e-08,4;UBERON:0004111,6.49e-08,240;UBERON:0000020,1.02e-07,24;UBERON:0001032,1.02e-07,24;UBERON:0004456,1.02e-07,24;UBERON:0001871,1.10e-07,6;UBERON:0002784,1.24e-07,4;UBERON:0002037,1.59e-07,6;UBERON:0006215,1.59e-07,6;UBERON:0001456,2.89e-07,22;UBERON:0000369,3.66e-07,4;UBERON:0002435,3.66e-07,4;UBERON:0000204,3.66e-07,4;UBERON:0010082,3.66e-07,4;UBERON:0001801,9.99e-07,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602694528023977,0,0,1.96993692922861,2.04000691244253,0.940364164434263,7.44213566540748,3.69560947696787,3.51519390865448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,5.48301939551594,4.87804674417641,4.65524364173568,0.458426764241994,0.728590576585084,1.11235332835329,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.454072282934794,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61450672119976,0.213557388818567,0,0,0,0.515281080091258,0.18611685633159,1.0126579934476,0.876933046450788,0.504867548488229,0.0920498986422993,0,0.355009592516614,0.302256294682921,0,0,0.272746120590835,0,0.121973706129595,0,0.580969714347592,1.34759371519982,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.28919525746314,0,0,0,0,0,0,2.88662684050547,3.13012093432707,3.75707821554629,0,0,0,0,0,0,0,0,0,0.335964256397719,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.417879593121,5.20559415430487,5.41302168944387,1.50764638800914,3.82763250991898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.512900250232778,3.28014645699706,3.25378394664303,0,0.366277859273374,0.41254749960294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54016790088044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.844430541190656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.94048259177238,0,0,0,0.318852545457645,0,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,1.30998378285754,0,0.121360521749513,0,3.12549761487054,0,0,0,1.9882952955326,2.39138007897872,3.11664374064136,0.16480387422676,0,0.19924798825107,0,11.5889064012967,1.53403023753232,0,0,0,0.179021174675609,0,0,0,0,3.87733098438087,1.48428957058962,0,0,0,0,0,0,0.472775363535873,3.10269035917318,0,19.7932494223953,8.85741385813839,1.92954301800653,19.8356257212208,16.1445719499588,9.45752380651352,2.19385397153973,0.980446171670911,0,0,0,0,0.359030577639089,0.325942115766024,0,0,0,0,0,0,0,0.19606253431774,0.167821586975843,0.189753732724185,0,0.843992258112108,0,0,0,0,0,0,7.11650708833493,4.3247378631276,4.17687798021822,2.56124305326573,0,1.1713222286267,0,0.782658475728359,0.971121518136371,0,2.41981432097328,0.91821828489147,0,0.300646838828985,1.24425829676697,0,0,0,0,0.284609546029793,0,1.38847790668105,0.0979923974143777,0.0870592065804026,0,6.70745526639304,0.967563312890852,2.11959019549938,1.39596276990456,0,0.0882561266915003,2.48578814858586,0,0.596143835108969,1.7727022867646,0.782205530939212,0,0,0.799238438328521,0.576361668616424,9.73561067410283,0.686379991447858,1.4405479798815,1.73953549791606,0,0,0.104602846312333,0.101998217636322,0,7.20504346451747,2.73810757783986,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0,0,2.36225955635397,0,4.77137813885582,3.81369537112412,0,0,0,0,0,2.67298049295309,0,0,0,0,0.896436696664224,0.191915197319445,0,0,0,0,0,0,0,0,0,0.339936274560377,0,0,6.07629894899288,2.51241943311111,0,4.9337051562167,0,0,0,0,0,2.43585196761792,0,0,0,0,0,0.157054096250234,3.54427271986794,7.32157589411779,2.50381861413,6.88091034828085,5.10273637069521,3.35320575883471,0.138348634936231,0.124980407962107,0,0,0.941063278792687,5.62001886968258,1.01444720027578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.78554694685953,0,0,1.82696004375648,0,0.231522474323834,0,0.179088841081487,0,0,1.41351316756705,0.578742114812744,2.19625172848994,0.256241518587947,1.38172136692479,3.03859956177382,1.65910123382077,0,0,0,2.6208787907713,0,0,0,1.70706767510625,0,0,0.552317850755522,0.279759015438889,0,0,4.09734283307391,1.41539347670307,0,0.509197589862076,1.06287460050841,0.743614585554013,1.67593475391973,0.318004350653419,0,0,0,0,2.18379365327962,4.25089728976755,3.35231104020018,1.02558182120378,0.756215088665154,2.28218933131919,2.58361033010962,0,0,0.353909170043221,0,0,0,0.690359926060101,0,0,0,0,0,0.163771917510097,1.03499260351932,1.55336444622308,0.781078098613847,2.68692835451539,1.64881106504158,2.7348740450911,0,0,0,0.511049710558381,5.89272019466115,3.69912094440706,0,0.227662191351298,0,0,0.171488009437418,1.01954599465248,2.43359262182542,0.590969204419841,0.889851215136553,0,3.92788974790005,0,0,1.94334832096759,0,3.71678029718613,0,0.348724276104376,5.56346471368254,0,0,0,0,0,1.30165200803622,1.36341447614652,0,0.4582137370881,0,0,0,0,0.487671699929078,0,0,0,0,0.467878926924211,1.79055697645231,37.5787486857117,2.59775988689608,0.329821550236287,0,0,0,0.470317296361523,0,1.17838273550813,15.9009858363106,7.72320640850424,2.9585900930838,0,0,0.128915775947154,0,0.357107877211315,0.352894871715692,0,0,0,2.00675416412032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| |||
|short_description=p6@PAX6 | |||
}} |
Revision as of 07:05, 11 January 2014
Short description: | p6@PAX6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PAX6_5end |
Coexpression cluster: | C798_cerebellum_small_carcinosarcoma_argyrophil_Neural_gastric_Ciliary |
Association with transcript: | -2bp_to_ENST00000438681_5end |
EntrezGene: | PAX6 |
HGNC: | 8620 |
UniProt: | B1B1I8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.94e-10 | 25 |
oligodendrocyte | 4.48e-08 | 7 |
macroglial cell | 4.48e-08 | 7 |
astrocyte | 4.48e-08 | 7 |
oligodendrocyte precursor cell | 4.48e-08 | 7 |
neurectodermal cell | 4.24e-07 | 59 |